RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 AP2B1P63010 937 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 GEN1Q17RS7 908 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 ASTLQ6HA08 431 aaPredicted RBP17.97■□□□□ 0.47
SMPD3-211ENST00000568373 TXNDC11Q6PKC3 985 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 GPSM1Q86YR5 675 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 RBFAQ8N0V3 343 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 ECHDC3Q96DC8 303 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 PDLIM5Q96HC4 596 aaKnown RBP17.97■□□□□ 0.47
SMPD3-211ENST00000568373 NDE1Q9NXR1 346 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 SLC25A13Q9UJS0 675 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 ANGPTL2Q9UKU9 493 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 TMCO1Q9UM00 188 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 WASF2Q9Y6W5 498 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 CHD7Q9P2D1 2997 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 ANKRD12Q6UB98 2062 aa17.96■□□□□ 0.47
SMPD3-211ENST00000568373 TRBV5-4A0A0C4DH59 114 aa17.96■□□□□ 0.47
SMPD3-211ENST00000568373 GLYATL1P3A0A0U1RQE8 302 aa17.96■□□□□ 0.47
SMPD3-211ENST00000568373 FKBP6O75344 327 aa17.96■□□□□ 0.47
SMPD3-211ENST00000568373 FOXA1P55317 472 aa17.96■□□□□ 0.47
SMPD3-211ENST00000568373 SLC5A9Q2M3M2 681 aa17.96■□□□□ 0.47
SMPD3-211ENST00000568373 EML3Q32P44 896 aa17.96■□□□□ 0.47
SMPD3-211ENST00000568373 PTRHD1Q6GMV3 140 aaKnown RBP17.96■□□□□ 0.47
SMPD3-211ENST00000568373 LRRC74BQ6ZQY2 392 aa17.96■□□□□ 0.47
SMPD3-211ENST00000568373 PGAM4Q8N0Y7 254 aa17.96■□□□□ 0.47
SMPD3-211ENST00000568373 EFCAB3Q8N7B9 438 aa17.96■□□□□ 0.47
SMPD3-211ENST00000568373 HMGCLL1Q8TB92 370 aa17.96■□□□□ 0.47
SMPD3-211ENST00000568373 TWIST2Q8WVJ9 160 aa17.96■□□□□ 0.47
SMPD3-211ENST00000568373 NRG4Q8WWG1 115 aa17.96■□□□□ 0.47
SMPD3-211ENST00000568373 JADE3Q92613 823 aa17.96■□□□□ 0.47
SMPD3-211ENST00000568373 CCDC97Q96F63 343 aaPredicted RBP17.96■□□□□ 0.47
SMPD3-211ENST00000568373 C3orf30Q96M34 536 aa17.96■□□□□ 0.47
SMPD3-211ENST00000568373 ZNF570Q96NI8 536 aa17.96■□□□□ 0.47
SMPD3-211ENST00000568373 BBS2Q9BXC9 721 aa17.96■□□□□ 0.47
SMPD3-211ENST00000568373 NOTCH4Q99466 2003 aa17.96■□□□□ 0.46
SMPD3-211ENST00000568373 ATP6AP2A0A1C7CYW4 349 aa17.95■□□□□ 0.46
SMPD3-211ENST00000568373 NPIPB15A6NHN6 443 aaPredicted RBP17.95■□□□□ 0.46
SMPD3-211ENST00000568373 NCF1BA6NI72 391 aaPredicted RBP17.95■□□□□ 0.46
SMPD3-211ENST00000568373 NCF1CA8MVU1 366 aaPredicted RBP17.95■□□□□ 0.46
SMPD3-211ENST00000568373 PSMD12O00232 456 aaPredicted RBP17.95■□□□□ 0.46
SMPD3-211ENST00000568373 ATP6AP2O75787 350 aa17.95■□□□□ 0.46
SMPD3-211ENST00000568373 NCF1P14598 390 aaPredicted RBP17.95■□□□□ 0.46
SMPD3-211ENST00000568373 CA5AP35218 305 aa17.95■□□□□ 0.46
SMPD3-211ENST00000568373 HK3P52790 923 aa17.95■□□□□ 0.46
SMPD3-211ENST00000568373 ART3Q13508 389 aa17.95■□□□□ 0.46
SMPD3-211ENST00000568373 PTK2BQ14289 1009 aa17.95■□□□□ 0.46
SMPD3-211ENST00000568373 MAPRE2Q15555 327 aa17.95■□□□□ 0.46
SMPD3-211ENST00000568373 TCHHL1Q5QJ38 904 aaPredicted RBP17.95■□□□□ 0.46
SMPD3-211ENST00000568373 LYPLAL1Q5VWZ2 237 aa17.95■□□□□ 0.46
SMPD3-211ENST00000568373 GRAMD4Q6IC98 578 aa17.95■□□□□ 0.46
SMPD3-211ENST00000568373 AAGABQ6PD74 315 aa17.95■□□□□ 0.46
SMPD3-211ENST00000568373 PSRC1Q6PGN9 363 aaPredicted RBP17.95■□□□□ 0.46
SMPD3-211ENST00000568373 GK5Q6ZS86 529 aa17.95■□□□□ 0.46
SMPD3-211ENST00000568373 TSPAN33Q86UF1 283 aa17.95■□□□□ 0.46
SMPD3-211ENST00000568373 CBARPQ8N350 705 aaPredicted RBP17.95■□□□□ 0.46
SMPD3-211ENST00000568373 MICAL1Q8TDZ2 1067 aa17.95■□□□□ 0.46
SMPD3-211ENST00000568373 IRF7Q92985 503 aa17.95■□□□□ 0.46
SMPD3-211ENST00000568373 RSRC1Q96IZ7 334 aaKnown RBP17.95■□□□□ 0.46
SMPD3-211ENST00000568373 SERPINI1Q99574 410 aa17.95■□□□□ 0.46
SMPD3-211ENST00000568373 BOCQ9BWV1 1114 aa17.95■□□□□ 0.46
SMPD3-211ENST00000568373 CEP44Q9C0F1 390 aa17.95■□□□□ 0.46
SMPD3-211ENST00000568373 SUV39H2Q9H5I1 410 aa17.95■□□□□ 0.46
SMPD3-211ENST00000568373 SEMA4BQ9NPR2 832 aaPredicted RBP17.95■□□□□ 0.46
SMPD3-211ENST00000568373 GNPTGQ9UJJ9 305 aa17.95■□□□□ 0.46
SMPD3-211ENST00000568373 SLC4A7Q9Y6M7 1214 aa17.95■□□□□ 0.46
SMPD3-211ENST00000568373 A8MX80 341 aa17.95■□□□□ 0.46
SMPD3-211ENST00000568373 BNIP3LO60238 219 aa17.95■□□□□ 0.46
SMPD3-211ENST00000568373 PABPC1P11940 636 aaKnown RBP17.95■□□□□ 0.46
SMPD3-211ENST00000568373 ANPEPP15144 967 aa17.95■□□□□ 0.46
SMPD3-211ENST00000568373 ACRV1P26436 265 aa17.95■□□□□ 0.46
SMPD3-211ENST00000568373 HOXA9P31269 272 aa17.95■□□□□ 0.46
SMPD3-211ENST00000568373 SPAM1P38567 509 aa17.95■□□□□ 0.46
SMPD3-211ENST00000568373 AGTR2P50052 363 aa17.95■□□□□ 0.46
SMPD3-211ENST00000568373 CCNIQ14094 377 aa17.95■□□□□ 0.46
SMPD3-211ENST00000568373 FASTKQ14296 549 aaKnown RBP17.95■□□□□ 0.46
SMPD3-211ENST00000568373 TAF11Q15544 211 aa17.95■□□□□ 0.46
SMPD3-211ENST00000568373 FBXO48Q5FWF7 155 aa17.95■□□□□ 0.46
SMPD3-211ENST00000568373 CRTC1Q6UUV9 634 aa17.95■□□□□ 0.46
SMPD3-211ENST00000568373 BNC2Q6ZN30 1099 aaPredicted RBP17.95■□□□□ 0.46
SMPD3-211ENST00000568373 PCDH20Q8N6Y1 951 aaKnown RBP17.95■□□□□ 0.46
SMPD3-211ENST00000568373 ZNF483Q8TF39 744 aaPredicted RBP17.95■□□□□ 0.46
SMPD3-211ENST00000568373 SCRN2Q96FV2 425 aa17.95■□□□□ 0.46
SMPD3-211ENST00000568373 CPEB1Q9BZB8 566 aaKnown RBP17.95■□□□□ 0.46
SMPD3-211ENST00000568373 CIPCQ9C0C6 399 aa17.95■□□□□ 0.46
SMPD3-211ENST00000568373 AKTIPQ9H8T0 292 aa17.95■□□□□ 0.46
SMPD3-211ENST00000568373 PCTPQ9UKL6 214 aa17.95■□□□□ 0.46
SMPD3-211ENST00000568373 PRRC2BQ5JSZ5 2229 aaKnown RBP17.95■□□□□ 0.46
SMPD3-211ENST00000568373 SOBPA7XYQ1 873 aa17.94■□□□□ 0.46
SMPD3-211ENST00000568373 PIP5K1BO14986 540 aa17.94■□□□□ 0.46
SMPD3-211ENST00000568373 SNX2O60749 519 aa17.94■□□□□ 0.46
SMPD3-211ENST00000568373 ATP4BP51164 291 aa17.94■□□□□ 0.46
SMPD3-211ENST00000568373 CCNHP51946 323 aaPredicted RBP17.94■□□□□ 0.46
SMPD3-211ENST00000568373 CHRNA6Q15825 494 aa17.94■□□□□ 0.46
SMPD3-211ENST00000568373 GPR33Q49SQ1 333 aa17.94■□□□□ 0.46
SMPD3-211ENST00000568373 TPRG1Q6ZUI0 275 aa17.94■□□□□ 0.46
SMPD3-211ENST00000568373 USP45Q70EL2 814 aa17.94■□□□□ 0.46
SMPD3-211ENST00000568373 LEMD2Q8NC56 503 aa17.94■□□□□ 0.46
SMPD3-211ENST00000568373 KCNA7Q96RP8 456 aa17.94■□□□□ 0.46
SMPD3-211ENST00000568373 WDR41Q9HAD4 459 aa17.94■□□□□ 0.46
SMPD3-211ENST00000568373 SPHK2Q9NRA0 654 aa17.94■□□□□ 0.46
SMPD3-211ENST00000568373 NMRK1Q9NWW6 199 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms