RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 RAD18Q9NS91 495 aa14.48□□□□□ -0.09
FANCA-220ENST00000566409 IL17CQ9P0M4 197 aa14.48□□□□□ -0.09
FANCA-220ENST00000566409 TRIM10Q9UDY6 481 aa14.48□□□□□ -0.09
FANCA-220ENST00000566409 EFR3BQ9Y2G0 817 aa14.48□□□□□ -0.09
FANCA-220ENST00000566409 ZNF106Q9H2Y7 1883 aaKnown RBP14.47□□□□□ -0.09
FANCA-220ENST00000566409 CCDC66A2RUB6 948 aa14.47□□□□□ -0.09
FANCA-220ENST00000566409 PRR19A6NJB7 356 aa14.47□□□□□ -0.09
FANCA-220ENST00000566409 H7C0C1 242 aa14.47□□□□□ -0.09
FANCA-220ENST00000566409 AGTP01019 485 aa14.47□□□□□ -0.09
FANCA-220ENST00000566409 CCL4P13236 92 aa14.47□□□□□ -0.09
FANCA-220ENST00000566409 MPSTP25325 297 aa14.47□□□□□ -0.09
FANCA-220ENST00000566409 ATP5OP48047 213 aa14.47□□□□□ -0.09
FANCA-220ENST00000566409 LIMK2P53671 638 aa14.47□□□□□ -0.09
FANCA-220ENST00000566409 NAP1L1P55209 391 aaKnown RBP14.47□□□□□ -0.09
FANCA-220ENST00000566409 MPP3Q13368 585 aa14.47□□□□□ -0.09
FANCA-220ENST00000566409 OLIG2Q13516 323 aa14.47□□□□□ -0.09
FANCA-220ENST00000566409 PTPRCAPQ14761 206 aa14.47□□□□□ -0.09
FANCA-220ENST00000566409 CLPPQ16740 277 aaPredicted RBP14.47□□□□□ -0.09
FANCA-220ENST00000566409 PCSK4Q6UW60 755 aa14.47□□□□□ -0.09
FANCA-220ENST00000566409 GPR155Q7Z3F1 870 aa14.47□□□□□ -0.09
FANCA-220ENST00000566409 CALR3Q96L12 384 aaKnown RBP14.47□□□□□ -0.09
FANCA-220ENST00000566409 PLEKHG4BQ96PX9 1271 aa14.47□□□□□ -0.09
FANCA-220ENST00000566409 SRPK1Q96SB4 655 aaKnown RBP14.47□□□□□ -0.09
FANCA-220ENST00000566409 DESI2Q9BSY9 194 aa14.47□□□□□ -0.09
FANCA-220ENST00000566409 PRDM8Q9NQV8 689 aa14.47□□□□□ -0.09
FANCA-220ENST00000566409 KCNK4Q9NYG8 393 aa14.47□□□□□ -0.09
FANCA-220ENST00000566409 SCHIP1Q9P0W5 487 aaPredicted RBP14.47□□□□□ -0.09
FANCA-220ENST00000566409 ACSL6Q9UKU0 697 aa14.47□□□□□ -0.09
FANCA-220ENST00000566409 TRHDEQ9UKU6 1024 aa14.47□□□□□ -0.09
FANCA-220ENST00000566409 PRAMEF33A0A0G2JMD5 474 aa14.46□□□□□ -0.09
FANCA-220ENST00000566409 C9orf172C9J069 976 aa14.46□□□□□ -0.09
FANCA-220ENST00000566409 GAPDHSO14556 408 aaPredicted RBP14.46□□□□□ -0.09
FANCA-220ENST00000566409 NVLO15381 856 aaKnown RBP14.46□□□□□ -0.09
FANCA-220ENST00000566409 GPR39O43194 453 aa14.46□□□□□ -0.09
FANCA-220ENST00000566409 EFSO43281 561 aa14.46□□□□□ -0.09
FANCA-220ENST00000566409 BUD23O43709 281 aaKnown RBP14.46□□□□□ -0.09
FANCA-220ENST00000566409 SNX2O60749 519 aa14.46□□□□□ -0.09
FANCA-220ENST00000566409 PRAMEF10O60809 474 aa14.46□□□□□ -0.09
FANCA-220ENST00000566409 JMJD7P0C870 316 aa14.46□□□□□ -0.09
FANCA-220ENST00000566409 F3P13726 295 aa14.46□□□□□ -0.09
FANCA-220ENST00000566409 ARSDP51689 593 aa14.46□□□□□ -0.09
FANCA-220ENST00000566409 CLCNKAP51800 687 aa14.46□□□□□ -0.09
FANCA-220ENST00000566409 RWDD2BP57060 319 aa14.46□□□□□ -0.09
FANCA-220ENST00000566409 MSLNQ13421 630 aaPredicted RBP14.46□□□□□ -0.09
FANCA-220ENST00000566409 BIRC2Q13490 618 aa14.46□□□□□ -0.09
FANCA-220ENST00000566409 TGIF1Q15583 401 aa14.46□□□□□ -0.09
FANCA-220ENST00000566409 CRTC3Q6UUV7 619 aa14.46□□□□□ -0.09
FANCA-220ENST00000566409 C11orf96Q7Z7L8 435 aa14.46□□□□□ -0.09
FANCA-220ENST00000566409 JAMLQ86YT9 394 aa14.46□□□□□ -0.09
FANCA-220ENST00000566409 OR4D9Q8NGE8 314 aa14.46□□□□□ -0.09
FANCA-220ENST00000566409 BLOC1S5Q8TDH9 187 aa14.46□□□□□ -0.09
FANCA-220ENST00000566409 USP7Q93009 1102 aa14.46□□□□□ -0.09
FANCA-220ENST00000566409 PMEPA1Q969W9 287 aa14.46□□□□□ -0.09
FANCA-220ENST00000566409 TMEM159Q96B96 161 aa14.46□□□□□ -0.09
FANCA-220ENST00000566409 CCDC74BQ96LY2 380 aa14.46□□□□□ -0.09
FANCA-220ENST00000566409 VPS35Q96QK1 796 aa14.46□□□□□ -0.09
FANCA-220ENST00000566409 UBL7Q96S82 380 aaPredicted RBP14.46□□□□□ -0.09
FANCA-220ENST00000566409 CMKLR1Q99788 373 aa14.46□□□□□ -0.09
FANCA-220ENST00000566409 GBA3Q9H227 469 aa14.46□□□□□ -0.09
FANCA-220ENST00000566409 TRABDQ9H4I3 376 aa14.46□□□□□ -0.09
FANCA-220ENST00000566409 SARS2Q9NP81 518 aaKnown RBP14.46□□□□□ -0.09
FANCA-220ENST00000566409 KLC4Q9NSK0 619 aa14.46□□□□□ -0.09
FANCA-220ENST00000566409 FOXJ2Q9P0K8 574 aa14.46□□□□□ -0.09
FANCA-220ENST00000566409 PDP2Q9P2J9 529 aa14.46□□□□□ -0.09
FANCA-220ENST00000566409 RSPH14Q9UHP6 348 aa14.46□□□□□ -0.09
FANCA-220ENST00000566409 PACSIN2Q9UNF0 486 aaPredicted RBP14.46□□□□□ -0.09
FANCA-220ENST00000566409 ZNF462Q96JM2 2506 aa14.45□□□□□ -0.1
FANCA-220ENST00000566409 UGT1A9O60656 530 aa14.45□□□□□ -0.1
FANCA-220ENST00000566409 IPO7O95373 1038 aaKnown RBP14.45□□□□□ -0.1
FANCA-220ENST00000566409 RBP3P10745 1247 aa14.45□□□□□ -0.1
FANCA-220ENST00000566409 THRAP10827 490 aa14.45□□□□□ -0.1
FANCA-220ENST00000566409 FGF3P11487 239 aaPredicted RBP14.45□□□□□ -0.1
FANCA-220ENST00000566409 UGT1A6P19224 532 aa14.45□□□□□ -0.1
FANCA-220ENST00000566409 HLA-DPA1P20036 260 aa14.45□□□□□ -0.1
FANCA-220ENST00000566409 UGT1A1P22309 533 aa14.45□□□□□ -0.1
FANCA-220ENST00000566409 UGT1A4P22310 534 aa14.45□□□□□ -0.1
FANCA-220ENST00000566409 ADRA1AP35348 466 aa14.45□□□□□ -0.1
FANCA-220ENST00000566409 UGT1A3P35503 534 aa14.45□□□□□ -0.1
FANCA-220ENST00000566409 TMPRSS3P57727 454 aa14.45□□□□□ -0.1
FANCA-220ENST00000566409 EIF3EP60228 445 aaKnown RBP14.45□□□□□ -0.1
FANCA-220ENST00000566409 GPLD1P80108 840 aa14.45□□□□□ -0.1
FANCA-220ENST00000566409 HHEXQ03014 270 aa14.45□□□□□ -0.1
FANCA-220ENST00000566409 SRSF6Q13247 344 aaKnown RBP14.45□□□□□ -0.1
FANCA-220ENST00000566409 NFATC2Q13469 925 aa14.45□□□□□ -0.1
FANCA-220ENST00000566409 CHRNA6Q15825 494 aa14.45□□□□□ -0.1
FANCA-220ENST00000566409 PLA2G4EQ3MJ16 856 aa14.45□□□□□ -0.1
FANCA-220ENST00000566409 ANKRD20A2Q5SQ80 823 aa14.45□□□□□ -0.1
FANCA-220ENST00000566409 ARHGAP40Q5TG30 622 aa14.45□□□□□ -0.1
FANCA-220ENST00000566409 CCDC181Q5TID7 509 aa14.45□□□□□ -0.1
FANCA-220ENST00000566409 ANKRD20A1Q5TYW2 823 aa14.45□□□□□ -0.1
FANCA-220ENST00000566409 ANKRD20A3Q5VUR7 823 aa14.45□□□□□ -0.1
FANCA-220ENST00000566409 BROXQ5VW32 411 aa14.45□□□□□ -0.1
FANCA-220ENST00000566409 RANBP10Q6VN20 620 aa14.45□□□□□ -0.1
FANCA-220ENST00000566409 PHYKPLQ8IUZ5 450 aa14.45□□□□□ -0.1
FANCA-220ENST00000566409 DTX3LQ8TDB6 740 aa14.45□□□□□ -0.1
FANCA-220ENST00000566409 SNRNP27Q8WVK2 155 aaKnown RBP14.45□□□□□ -0.1
FANCA-220ENST00000566409 CCDC97Q96F63 343 aaPredicted RBP14.45□□□□□ -0.1
FANCA-220ENST00000566409 SLC38A3Q99624 504 aa14.45□□□□□ -0.1
FANCA-220ENST00000566409 UGT1A7Q9HAW7 530 aa14.45□□□□□ -0.1
FANCA-220ENST00000566409 UGT1A10Q9HAW8 530 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms