RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 PDLIM4P50479 330 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 HSD17B4P51659 736 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 CLDN20P56880 219 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 DDR1Q08345 913 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 GRSF1Q12849 480 aaKnown RBP eCLIP4.38□□□□□ -1.71
CCDC54-201ENST00000261058 DLG1Q12959 904 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 SYT16Q17RD7 645 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 MYLK3Q32MK0 819 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 KRTCAP3Q53RY4 240 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 KCNT1Q5JUK3 1230 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 CCNI2Q6ZMN8 369 aaPredicted RBP4.38□□□□□ -1.71
CCDC54-201ENST00000261058 KBTBD6Q86V97 674 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 LINC00346Q8IVM7 164 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 ARID3BQ8IVW6 561 aaPredicted RBP4.38□□□□□ -1.71
CCDC54-201ENST00000261058 ZNF34Q8IZ26 560 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 C1orf87Q8N0U7 546 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 RASGEF1CQ8N431 466 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 ACVR1CQ8NER5 493 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 MARK4Q96L34 752 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 WACQ9BTA9 647 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 OCIAD1Q9NX40 245 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 NKIRAS2Q9NYR9 191 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 SIX4Q9UIU6 781 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 LOXL2Q9Y4K0 774 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 SNX9Q9Y5X1 595 aa4.38□□□□□ -1.71
CCDC54-201ENST00000261058 LILRA5A6NI73 299 aa4.37□□□□□ -1.71
CCDC54-201ENST00000261058 EIF4E1BA6NMX2 242 aaKnown RBP4.37□□□□□ -1.71
CCDC54-201ENST00000261058 ZNF587BE7ETH6 402 aa4.37□□□□□ -1.71
CCDC54-201ENST00000261058 H3BQ06 376 aaPredicted RBP4.37□□□□□ -1.71
CCDC54-201ENST00000261058 SH2B2O14492 632 aaPredicted RBP4.37□□□□□ -1.71
CCDC54-201ENST00000261058 ADAMDEC1O15204 470 aa4.37□□□□□ -1.71
CCDC54-201ENST00000261058 FIBPO43427 364 aa4.37□□□□□ -1.71
CCDC54-201ENST00000261058 PMS2P2O95744 297 aa4.37□□□□□ -1.71
CCDC54-201ENST00000261058 STARD3NLO95772 234 aa4.37□□□□□ -1.71
CCDC54-201ENST00000261058 PRLRP16471 622 aa4.37□□□□□ -1.71
CCDC54-201ENST00000261058 NNMTP40261 264 aa4.37□□□□□ -1.71
CCDC54-201ENST00000261058 DSCR9P59020 149 aa4.37□□□□□ -1.71
CCDC54-201ENST00000261058 CDC16Q13042 620 aa4.37□□□□□ -1.71
CCDC54-201ENST00000261058 HNRNPA0Q13151 305 aaKnown RBP4.37□□□□□ -1.71
CCDC54-201ENST00000261058 TNFAIP1Q13829 316 aa4.37□□□□□ -1.71
CCDC54-201ENST00000261058 KCNC3Q14003 757 aa4.37□□□□□ -1.71
CCDC54-201ENST00000261058 BAATQ14032 418 aaPredicted RBP4.37□□□□□ -1.71
CCDC54-201ENST00000261058 NTRK2Q16620 822 aa4.37□□□□□ -1.71
CCDC54-201ENST00000261058 CCDC184Q52MB2 194 aa4.37□□□□□ -1.71
CCDC54-201ENST00000261058 GARNL3Q5VVW2 1013 aa4.37□□□□□ -1.71
CCDC54-201ENST00000261058 RGMBQ6NW40 437 aa4.37□□□□□ -1.71
CCDC54-201ENST00000261058 TPRG1Q6ZUI0 275 aa4.37□□□□□ -1.71
CCDC54-201ENST00000261058 GET4Q7L5D6 327 aaPredicted RBP4.37□□□□□ -1.71
CCDC54-201ENST00000261058 KRT74Q7RTS7 529 aa4.37□□□□□ -1.71
CCDC54-201ENST00000261058 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.37□□□□□ -1.71
CCDC54-201ENST00000261058 ZDHHC17Q8IUH5 632 aa4.37□□□□□ -1.71
CCDC54-201ENST00000261058 CEP97Q8IW35 865 aa4.37□□□□□ -1.71
CCDC54-201ENST00000261058 C9orf106Q8NAJ2 232 aa4.37□□□□□ -1.71
CCDC54-201ENST00000261058 PRPF31Q8WWY3 499 aaKnown RBP4.37□□□□□ -1.71
CCDC54-201ENST00000261058 ABTB1Q969K4 478 aaPredicted RBP4.37□□□□□ -1.71
CCDC54-201ENST00000261058 MOAP1Q96BY2 351 aa4.37□□□□□ -1.71
CCDC54-201ENST00000261058 C3orf30Q96M34 536 aa4.37□□□□□ -1.71
CCDC54-201ENST00000261058 ZNF385AQ96PM9 386 aaKnown RBP4.37□□□□□ -1.71
CCDC54-201ENST00000261058 OR1F2PQ96R84 312 aa4.37□□□□□ -1.71
CCDC54-201ENST00000261058 NUDCD1Q96RS6 583 aa4.37□□□□□ -1.71
CCDC54-201ENST00000261058 PCYT2Q99447 389 aa4.37□□□□□ -1.71
CCDC54-201ENST00000261058 CMKLR1Q99788 373 aa4.37□□□□□ -1.71
CCDC54-201ENST00000261058 MRPL1Q9BYD6 325 aaKnown RBP4.37□□□□□ -1.71
CCDC54-201ENST00000261058 RETREG1Q9H6L5 497 aa4.37□□□□□ -1.71
CCDC54-201ENST00000261058 MARCH4Q9P2E8 410 aaPredicted RBP4.37□□□□□ -1.71
CCDC54-201ENST00000261058 MORF4L1Q9UBU8 362 aa4.37□□□□□ -1.71
CCDC54-201ENST00000261058 RPS6KA6Q9UK32 745 aa4.37□□□□□ -1.71
CCDC54-201ENST00000261058 PLAGL1Q9UM63 463 aa4.37□□□□□ -1.71
CCDC54-201ENST00000261058 WBP11Q9Y2W2 641 aaKnown RBP4.37□□□□□ -1.71
CCDC54-201ENST00000261058 PCDHAC2Q9Y5I4 1007 aa4.37□□□□□ -1.71
CCDC54-201ENST00000261058 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.37□□□□□ -1.71
CCDC54-201ENST00000261058 ADAM20O43506 726 aa4.36□□□□□ -1.71
CCDC54-201ENST00000261058 KCNK5O95279 499 aa4.36□□□□□ -1.71
CCDC54-201ENST00000261058 RPN1P04843 607 aaKnown RBP4.36□□□□□ -1.71
CCDC54-201ENST00000261058 DAOP14920 347 aa4.36□□□□□ -1.71
CCDC54-201ENST00000261058 CORO1AP31146 461 aaKnown RBP4.36□□□□□ -1.71
CCDC54-201ENST00000261058 KRTAP10-11P60412 298 aa4.36□□□□□ -1.71
CCDC54-201ENST00000261058 ZXDBP98169 803 aa4.36□□□□□ -1.71
CCDC54-201ENST00000261058 RUNX1T1Q06455 604 aa4.36□□□□□ -1.71
CCDC54-201ENST00000261058 KEAP1Q14145 624 aa4.36□□□□□ -1.71
CCDC54-201ENST00000261058 C15orf59Q2T9L4 293 aaPredicted RBP4.36□□□□□ -1.71
CCDC54-201ENST00000261058 ALDH1L2Q3SY69 923 aa4.36□□□□□ -1.71
CCDC54-201ENST00000261058 Q75L30 129 aa4.36□□□□□ -1.71
CCDC54-201ENST00000261058 AACSQ86V21 672 aa4.36□□□□□ -1.71
CCDC54-201ENST00000261058 SATL1Q86VE3 508 aa4.36□□□□□ -1.71
CCDC54-201ENST00000261058 GCSAMQ8N6F7 178 aa4.36□□□□□ -1.71
CCDC54-201ENST00000261058 DUSP19Q8WTR2 217 aa4.36□□□□□ -1.71
CCDC54-201ENST00000261058 PTPMT1Q8WUK0 201 aaPredicted RBP4.36□□□□□ -1.71
CCDC54-201ENST00000261058 JAKMIP2Q96AA8 810 aa4.36□□□□□ -1.71
CCDC54-201ENST00000261058 MTBPQ96DY7 904 aa4.36□□□□□ -1.71
CCDC54-201ENST00000261058 SLC22A12Q96S37 553 aa4.36□□□□□ -1.71
CCDC54-201ENST00000261058 PPIL3Q9H2H8 161 aaKnown RBP4.36□□□□□ -1.71
CCDC54-201ENST00000261058 CHMP4BQ9H444 224 aaKnown RBP4.36□□□□□ -1.71
CCDC54-201ENST00000261058 OSGEPL1Q9H4B0 414 aa4.36□□□□□ -1.71
CCDC54-201ENST00000261058 PSD3Q9NYI0 1048 aa4.36□□□□□ -1.71
CCDC54-201ENST00000261058 CHORDC1Q9UHD1 332 aaPredicted RBP4.36□□□□□ -1.71
CCDC54-201ENST00000261058 FBXL2Q9UKC9 423 aa4.36□□□□□ -1.71
CCDC54-201ENST00000261058 PTRH2Q9Y3E5 179 aaKnown RBP4.36□□□□□ -1.71
CCDC54-201ENST00000261058 PTPRCP08575 1304 aa4.36□□□□□ -1.71
CCDC54-201ENST00000261058 ZNF541Q9H0D2 1346 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms