RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 Q6ZSR9 355 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 FAM160B2Q86V87 743 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 MARCH9Q86YJ5 346 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 PCDH20Q8N6Y1 951 aaKnown RBP0.7□□□□□ -2.3
COPB1-212ENST00000534771 ZNF527Q8NB42 609 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 CSNK2A3Q8NEV1 391 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 HMGCLL1Q8TB92 370 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 DNAAF4Q8WXU2 420 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 JDP2Q8WYK2 163 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 CNOT9Q92600 299 aaKnown RBP0.7□□□□□ -2.3
COPB1-212ENST00000534771 TMEM143Q96AN5 459 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 ORAI1Q96D31 301 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 TMEM41AQ96HV5 264 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 PRAC1Q96KF2 57 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 PRMT6Q96LA8 375 aaPredicted RBP0.7□□□□□ -2.3
COPB1-212ENST00000534771 ZSCAN31Q96LW9 406 aaPredicted RBP0.7□□□□□ -2.3
COPB1-212ENST00000534771 LCE3DQ9BYE3 92 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 NUF2Q9BZD4 464 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 TKTL2Q9H0I9 626 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 PPP1R3EQ9H7J1 279 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 PANK3Q9H999 370 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 BPIFA1Q9NP55 256 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 HINT3Q9NQE9 182 aaKnown RBP0.7□□□□□ -2.3
COPB1-212ENST00000534771 TUBE1Q9UJT0 475 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 LSM4Q9Y4Z0 139 aaKnown RBP0.7□□□□□ -2.3
COPB1-212ENST00000534771 A0A0G2JNG1 304 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 C5orf60A6NFR6 353 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 ANKRD66B4E2M5 251 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 APAF1O14727 1248 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 SLC22A2O15244 555 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 BCAT2O15382 392 aaPredicted RBP0.69□□□□□ -2.3
COPB1-212ENST00000534771 TRMUO75648 421 aaKnown RBP0.69□□□□□ -2.3
COPB1-212ENST00000534771 MT-CYBP00156 380 aaPredicted RBP0.69□□□□□ -2.3
COPB1-212ENST00000534771 NGFP01138 241 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 LIFP15018 202 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 ANXA7P20073 488 aaKnown RBP0.69□□□□□ -2.3
COPB1-212ENST00000534771 NR2F2P24468 414 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 ELF1P32519 619 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 SERPINF1P36955 418 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 AK2P54819 239 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 SORDQ00796 357 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 BTKQ06187 659 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 KIR2DS5Q14953 304 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 RRS1Q15050 365 aaKnown RBP0.69□□□□□ -2.3
COPB1-212ENST00000534771 PUM3Q15397 648 aaKnown RBP0.69□□□□□ -2.3
COPB1-212ENST00000534771 LONRF1Q17RB8 773 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 DUOXA1Q1HG43 343 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 SGSM1Q2NKQ1 1148 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 C15orf32Q32M92 178 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 DCST1Q5T197 706 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 SERTAD4-AS1Q5TG53 156 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 CCDC181Q5TID7 509 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 FRG2Q64ET8 278 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 C18orf63Q68DL7 685 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 SULT6B1Q6IMI4 303 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 PGBD2Q6P3X8 592 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 C17orf99Q6UX52 265 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 PLXDC2Q6UX71 529 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 TMEM64Q6YI46 380 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 TBC1D1Q86TI0 1168 aaPredicted RBP0.69□□□□□ -2.3
COPB1-212ENST00000534771 GPAT4Q86UL3 456 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 KCNMB4Q86W47 210 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 LONP2Q86WA8 852 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 WDR75Q8IWA0 830 aaKnown RBP0.69□□□□□ -2.3
COPB1-212ENST00000534771 SLC35F3Q8IY50 421 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 BEST3Q8N1M1 668 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 ZBTB2Q8N680 514 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 RBM15BQ8NDT2 890 aaKnown RBP0.69□□□□□ -2.3
COPB1-212ENST00000534771 SLC38A5Q8WUX1 472 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 RAB40AQ8WXH6 277 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 PHF21AQ96BD5 680 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 EIF2AK1Q9BQI3 630 aaKnown RBP0.69□□□□□ -2.3
COPB1-212ENST00000534771 RHNO1Q9BSD3 238 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 CLEC7AQ9BXN2 247 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 RTN4RQ9BZR6 473 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 LMAN2LQ9H0V9 348 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 UPF3AQ9H1J1 476 aaKnown RBP0.69□□□□□ -2.3
COPB1-212ENST00000534771 P2RY12Q9H244 342 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 EPHX3Q9H6B9 360 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 CHODLQ9H9P2 273 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 APOBEC3GQ9HC16 384 aaKnown RBP0.69□□□□□ -2.3
COPB1-212ENST00000534771 TRPC7Q9HCX4 862 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 G6PC2Q9NQR9 355 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 SLC38A7Q9NVC3 462 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 BEX4Q9NWD9 120 aaPredicted RBP0.69□□□□□ -2.3
COPB1-212ENST00000534771 DACT1Q9NYF0 836 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 NUDT4Q9NZJ9 180 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 DNAJB4Q9UDY4 337 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 LIMA1Q9UHB6 759 aaKnown RBP0.69□□□□□ -2.3
COPB1-212ENST00000534771 FBXL2Q9UKC9 423 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 ERVK-11Q9UQG0 969 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 FAM96BQ9Y3D0 163 aa0.69□□□□□ -2.3
COPB1-212ENST00000534771 A0A1W2PPR1 153 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 OR5K3A6NET4 321 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 PER2O15055 1255 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 ANKRD28O15084 1053 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 KCNN4O15554 427 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 BUD23O43709 281 aaKnown RBP0.68□□□□□ -2.3
COPB1-212ENST00000534771 SYNCRIPO60506 623 aaKnown RBP0.68□□□□□ -2.3
COPB1-212ENST00000534771 KRT19P08727 400 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms