RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 IRF3Q14653 427 aa5.76□□□□□ -1.49
RNU4-39P-201ENST00000362455 TWISTNBQ3B726 338 aaPredicted RBP5.76□□□□□ -1.49
RNU4-39P-201ENST00000362455 KRTAP15-1Q3LI76 137 aa5.76□□□□□ -1.49
RNU4-39P-201ENST00000362455 ESCO2Q56NI9 601 aa5.76□□□□□ -1.49
RNU4-39P-201ENST00000362455 PRAMEF19Q5SWL8 479 aa5.76□□□□□ -1.49
RNU4-39P-201ENST00000362455 NCAPH2Q6IBW4 605 aa5.76□□□□□ -1.49
RNU4-39P-201ENST00000362455 APOBEC3HQ6NTF7 200 aaKnown RBP5.76□□□□□ -1.49
RNU4-39P-201ENST00000362455 LCTLQ6UWM7 567 aa5.76□□□□□ -1.49
RNU4-39P-201ENST00000362455 DENND6AQ8IWF6 608 aa5.76□□□□□ -1.49
RNU4-39P-201ENST00000362455 TAGAPQ8N103 731 aa5.76□□□□□ -1.49
RNU4-39P-201ENST00000362455 ZKSCAN4Q969J2 545 aaPredicted RBP5.76□□□□□ -1.49
RNU4-39P-201ENST00000362455 MSI2Q96DH6 328 aaKnown RBP5.76□□□□□ -1.49
RNU4-39P-201ENST00000362455 MRIQ9BWK5 157 aa5.76□□□□□ -1.49
RNU4-39P-201ENST00000362455 MAK16Q9BXY0 300 aaKnown RBP5.76□□□□□ -1.49
RNU4-39P-201ENST00000362455 CDT1Q9H211 546 aa5.76□□□□□ -1.49
RNU4-39P-201ENST00000362455 BPIFA1Q9NP55 256 aa5.76□□□□□ -1.49
RNU4-39P-201ENST00000362455 CNOT8Q9UFF9 292 aaKnown RBP5.76□□□□□ -1.49
RNU4-39P-201ENST00000362455 RPS6KA6Q9UK32 745 aa5.76□□□□□ -1.49
RNU4-39P-201ENST00000362455 SNX8Q9Y5X2 465 aa5.76□□□□□ -1.49
RNU4-39P-201ENST00000362455 ZNF646O15015 1829 aaPredicted RBP5.76□□□□□ -1.49
RNU4-39P-201ENST00000362455 COL6A3P12111 3177 aa5.75□□□□□ -1.49
RNU4-39P-201ENST00000362455 FAM90A8PA6NJQ4 464 aa5.75□□□□□ -1.49
RNU4-39P-201ENST00000362455 KCNU1A8MYU2 1149 aa5.75□□□□□ -1.49
RNU4-39P-201ENST00000362455 STMND1H3BQB6 276 aa5.75□□□□□ -1.49
RNU4-39P-201ENST00000362455 KLK8O60259 260 aa5.75□□□□□ -1.49
RNU4-39P-201ENST00000362455 CNOT3O75175 753 aaKnown RBP5.75□□□□□ -1.49
RNU4-39P-201ENST00000362455 FAM90A13PP0C7W8 464 aa5.75□□□□□ -1.49
RNU4-39P-201ENST00000362455 FAM90A24PP0C7X0 464 aa5.75□□□□□ -1.49
RNU4-39P-201ENST00000362455 MYZAPP0CAP1 466 aa5.75□□□□□ -1.49
RNU4-39P-201ENST00000362455 TFPIP10646 304 aa5.75□□□□□ -1.49
RNU4-39P-201ENST00000362455 IL7RP16871 459 aa5.75□□□□□ -1.49
RNU4-39P-201ENST00000362455 SHMT1P34896 483 aa5.75□□□□□ -1.49
RNU4-39P-201ENST00000362455 KRT20P35900 424 aa5.75□□□□□ -1.49
RNU4-39P-201ENST00000362455 KCNJ4P48050 445 aa5.75□□□□□ -1.49
RNU4-39P-201ENST00000362455 DRAP1Q14919 205 aaPredicted RBP5.75□□□□□ -1.49
RNU4-39P-201ENST00000362455 TCTN1Q2MV58 587 aa5.75□□□□□ -1.49
RNU4-39P-201ENST00000362455 CXorf66Q5JRM2 361 aaPredicted RBP5.75□□□□□ -1.49
RNU4-39P-201ENST00000362455 PLEKHS1Q5SXH7 462 aa5.75□□□□□ -1.49
RNU4-39P-201ENST00000362455 MFSD4BQ5TF39 518 aa5.75□□□□□ -1.49
RNU4-39P-201ENST00000362455 KRBA2Q6ZNG9 492 aa5.75□□□□□ -1.49
RNU4-39P-201ENST00000362455 PRIMA1Q86XR5 153 aa5.75□□□□□ -1.49
RNU4-39P-201ENST00000362455 ANKRD13BQ86YJ7 626 aa5.75□□□□□ -1.49
RNU4-39P-201ENST00000362455 FEM1CQ96JP0 617 aa5.75□□□□□ -1.49
RNU4-39P-201ENST00000362455 KRTAP4-7Q9BYR0 210 aa5.75□□□□□ -1.49
RNU4-39P-201ENST00000362455 PRSS22Q9GZN4 317 aa5.75□□□□□ -1.49
RNU4-39P-201ENST00000362455 MAP6D1Q9H9H5 199 aa5.75□□□□□ -1.49
RNU4-39P-201ENST00000362455 MAGEE1Q9HCI5 957 aa5.75□□□□□ -1.49
RNU4-39P-201ENST00000362455 ANKRD10Q9NXR5 420 aa5.75□□□□□ -1.49
RNU4-39P-201ENST00000362455 MTMR6Q9Y217 621 aa5.75□□□□□ -1.49
RNU4-39P-201ENST00000362455 FAM237AA0A1B0GTK4 181 aa5.74□□□□□ -1.49
RNU4-39P-201ENST00000362455 A0A1W2PQ09 198 aa5.74□□□□□ -1.49
RNU4-39P-201ENST00000362455 ZNF814B7Z6K7 855 aa5.74□□□□□ -1.49
RNU4-39P-201ENST00000362455 ATG13O75143 517 aa5.74□□□□□ -1.49
RNU4-39P-201ENST00000362455 BEST1O76090 585 aa5.74□□□□□ -1.49
RNU4-39P-201ENST00000362455 NKX2-2O95096 273 aa5.74□□□□□ -1.49
RNU4-39P-201ENST00000362455 PGM3O95394 542 aa5.74□□□□□ -1.49
RNU4-39P-201ENST00000362455 PRR35P0CG20 571 aa5.74□□□□□ -1.49
RNU4-39P-201ENST00000362455 ETFAP13804 333 aa5.74□□□□□ -1.49
RNU4-39P-201ENST00000362455 ENO3P13929 434 aaPredicted RBP5.74□□□□□ -1.49
RNU4-39P-201ENST00000362455 AGAP20933 346 aa5.74□□□□□ -1.49
RNU4-39P-201ENST00000362455 GCH1P30793 250 aa5.74□□□□□ -1.49
RNU4-39P-201ENST00000362455 DCTDP32321 178 aa5.74□□□□□ -1.49
RNU4-39P-201ENST00000362455 AVPR1AP37288 418 aa5.74□□□□□ -1.49
RNU4-39P-201ENST00000362455 PPP3CCP48454 512 aa5.74□□□□□ -1.49
RNU4-39P-201ENST00000362455 CALD1Q05682 793 aaKnown RBP5.74□□□□□ -1.49
RNU4-39P-201ENST00000362455 FAM27E3Q08E93 113 aa5.74□□□□□ -1.49
RNU4-39P-201ENST00000362455 STK4Q13043 487 aa5.74□□□□□ -1.49
RNU4-39P-201ENST00000362455 AIMP2Q13155 320 aaKnown RBP5.74□□□□□ -1.49
RNU4-39P-201ENST00000362455 BECN1Q14457 450 aa5.74□□□□□ -1.49
RNU4-39P-201ENST00000362455 LPIN1Q14693 890 aa5.74□□□□□ -1.49
RNU4-39P-201ENST00000362455 HEPHL1Q6MZM0 1159 aa5.74□□□□□ -1.49
RNU4-39P-201ENST00000362455 SLC2A7Q6PXP3 512 aa5.74□□□□□ -1.49
RNU4-39P-201ENST00000362455 TMCO3Q6UWJ1 677 aa5.74□□□□□ -1.49
RNU4-39P-201ENST00000362455 QSOX2Q6ZRP7 698 aa5.74□□□□□ -1.49
RNU4-39P-201ENST00000362455 ERO1BQ86YB8 467 aa5.74□□□□□ -1.49
RNU4-39P-201ENST00000362455 PARP16Q8N5Y8 322 aa5.74□□□□□ -1.49
RNU4-39P-201ENST00000362455 SNAPC3Q92966 411 aa5.74□□□□□ -1.49
RNU4-39P-201ENST00000362455 TMEM18Q96B42 140 aa5.74□□□□□ -1.49
RNU4-39P-201ENST00000362455 FBXL8Q96CD0 374 aa5.74□□□□□ -1.49
RNU4-39P-201ENST00000362455 ARHGEF26Q96DR7 871 aa5.74□□□□□ -1.49
RNU4-39P-201ENST00000362455 NPFFR1Q9GZQ6 430 aa5.74□□□□□ -1.49
RNU4-39P-201ENST00000362455 KLHL31Q9H511 634 aa5.74□□□□□ -1.49
RNU4-39P-201ENST00000362455 RANGRFQ9HD47 186 aaPredicted RBP5.74□□□□□ -1.49
RNU4-39P-201ENST00000362455 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.74□□□□□ -1.49
RNU4-39P-201ENST00000362455 SESN1Q9Y6P5 492 aa5.74□□□□□ -1.49
RNU4-39P-201ENST00000362455 P4HA2O15460 535 aa5.73□□□□□ -1.49
RNU4-39P-201ENST00000362455 PLOD3O60568 738 aa5.73□□□□□ -1.49
RNU4-39P-201ENST00000362455 RB1P06400 928 aa5.73□□□□□ -1.49
RNU4-39P-201ENST00000362455 CETPP11597 493 aa5.73□□□□□ -1.49
RNU4-39P-201ENST00000362455 CCL5P13501 91 aa5.73□□□□□ -1.49
RNU4-39P-201ENST00000362455 GABRB1P18505 474 aa5.73□□□□□ -1.49
RNU4-39P-201ENST00000362455 PSMC4P43686 418 aa5.73□□□□□ -1.49
RNU4-39P-201ENST00000362455 HMGA2P52926 109 aa5.73□□□□□ -1.49
RNU4-39P-201ENST00000362455 CDH12P55289 794 aa5.73□□□□□ -1.49
RNU4-39P-201ENST00000362455 PPIL2Q13356 520 aa5.73□□□□□ -1.49
RNU4-39P-201ENST00000362455 MTX1Q13505 466 aa5.73□□□□□ -1.49
RNU4-39P-201ENST00000362455 ARHGEF6Q15052 776 aa5.73□□□□□ -1.49
RNU4-39P-201ENST00000362455 SHBQ15464 509 aa5.73□□□□□ -1.49
RNU4-39P-201ENST00000362455 INPP5JQ15735 1006 aaPredicted RBP5.73□□□□□ -1.49
RNU4-39P-201ENST00000362455 SOWAHAQ2M3V2 549 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms