RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 KRT33AO76009 404 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 MMP3P08254 477 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 SPATA31C1P0DKV0 1188 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 HDCP19113 662 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 ATN1P54259 1190 aaPredicted RBP4.55□□□□□ -1.68
CHD9-221ENST00000615216 TAS2R40P59535 323 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 MAP2K5Q13163 448 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 TMEM44Q2T9K0 475 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 ZIK1Q3SY52 487 aaPredicted RBP4.55□□□□□ -1.68
CHD9-221ENST00000615216 TAPT1Q6NXT6 567 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 FAM171BQ6P995 826 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 ADGRD1Q6QNK2 874 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 GPR142Q7Z601 462 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 HDAC10Q969S8 669 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 FERD3LQ96RJ6 166 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 PRDM12Q9H4Q4 367 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 MCUBQ9NWR8 336 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 FBXO5Q9UKT4 447 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 ZNF490Q9ULM2 529 aaPredicted RBP4.55□□□□□ -1.68
CHD9-221ENST00000615216 STX16-NPEPL1H3BU86 382 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 STX16O14662 325 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 SERPINA1P01009 418 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 EPHA3P29320 983 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 ALDH4A1P30038 563 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 SLC7A2P52569 658 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 EIPR1Q53HC9 387 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 REP15Q6BDI9 236 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 SERPINA13PQ6UXR4 307 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 ZNF730Q6ZMV8 503 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 THAP5Q7Z6K1 395 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 SLCO6A1Q86UG4 719 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 SLC4A11Q8NBS3 891 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 FAM81AQ8TBF8 368 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 PIK3R3Q92569 461 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 LGMNQ99538 433 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 TTPALQ9BTX7 342 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 LRRC4CQ9HCJ2 640 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 CCDC59Q9P031 241 aaKnown RBP4.55□□□□□ -1.68
CHD9-221ENST00000615216 TLL2Q9Y6L7 1015 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 SCELO95171 688 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 CLDN9O95484 217 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 CCNCP24863 283 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 GNPDA1P46926 289 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 MTTPP55157 894 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 LIPEQ05469 1076 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 LARS2Q15031 903 aaKnown RBP4.55□□□□□ -1.68
CHD9-221ENST00000615216 SPATS1Q496A3 300 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 NKD2Q969F2 451 aaPredicted RBP4.55□□□□□ -1.68
CHD9-221ENST00000615216 COL26A1Q96A83 441 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 NUSAP1Q9BXS6 441 aaKnown RBP4.55□□□□□ -1.68
CHD9-221ENST00000615216 KCNN2Q9H2S1 579 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 ST6GALNAC4Q9H4F1 302 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 CALML5Q9NZT1 146 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 YDJCA8MPS7 323 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 TISP43B9A030 160 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 ENTPD5O75356 428 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 TNFRSF21O75509 655 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 BANF1O75531 89 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 DBTP11182 482 aaKnown RBP4.55□□□□□ -1.68
CHD9-221ENST00000615216 WNT3AP56704 352 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 RPL26P61254 145 aaKnown RBP4.55□□□□□ -1.68
CHD9-221ENST00000615216 FNBP1LQ5T0N5 605 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 CNSTQ6PJW8 725 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 MRPL45Q9BRJ2 306 aaKnown RBP4.55□□□□□ -1.68
CHD9-221ENST00000615216 IL1RAPQ9NPH3 570 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 SMPD3Q9NY59 655 aaPredicted RBP4.55□□□□□ -1.68
CHD9-221ENST00000615216 A0A1W2PQ72 361 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 PSMD11O00231 422 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 SYN3O14994 580 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 CCNE2O96020 404 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 C8GP07360 202 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 RHOQP17081 205 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 TNFSF9P41273 254 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 NDST2P52849 883 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 RPL7AP62424 266 aaKnown RBP4.55□□□□□ -1.68
CHD9-221ENST00000615216 BEX3Q00994 111 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 ABRQ12979 859 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 GPR107Q5VW38 600 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 RANBP3LQ86VV4 465 aaPredicted RBP4.55□□□□□ -1.68
CHD9-221ENST00000615216 REM2Q8IYK8 340 aaPredicted RBP4.55□□□□□ -1.68
CHD9-221ENST00000615216 OR52K2Q8NGK3 314 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 ZFYVE1Q9HBF4 777 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.55□□□□□ -1.68
CHD9-221ENST00000615216 MAT2BQ9NZL9 334 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.55□□□□□ -1.686e-8■■■□□ 15.1
CHD9-221ENST00000615216 E9PAM4 449 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 CILPO75339 1184 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 PAPSS2O95340 614 aaPredicted RBP4.55□□□□□ -1.68
CHD9-221ENST00000615216 ASLP04424 464 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 CDKN2BP42772 138 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 HADHBP55084 474 aaKnown RBP4.55□□□□□ -1.68
CHD9-221ENST00000615216 GTF2H2Q13888 395 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 TOMM20Q15388 145 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 NDUFA9Q16795 377 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 TEX44Q53QW1 395 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 SWT1Q5T5J6 900 aaKnown RBP4.55□□□□□ -1.68
CHD9-221ENST00000615216 GTF2H2CQ6P1K8 395 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 FIBCD1Q8N539 461 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 TWIST2Q8WVJ9 160 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 DPF3Q92784 378 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms