RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 C5orf34Q96MH7 638 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 WDR24Q96S15 920 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 SECISBP2Q96T21 854 aaKnown RBP4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 CIB1Q99828 191 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 SLF1Q9BQI6 1058 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 SPATA16Q9BXB7 569 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 FTOQ9C0B1 505 aaKnown RBP eCLIP4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 INTS2Q9H0H0 1204 aaKnown RBP4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 NDST4Q9H3R1 872 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 C10orf88Q9H8K7 445 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 VPS37BQ9H9H4 285 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 C12orf4Q9NQ89 552 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 FBXO28Q9NVF7 368 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 ARHGEF38Q9NXL2 777 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 CDC23Q9UJX2 597 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 FAF1Q9UNN5 650 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 UBE2J1Q9Y385 318 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 NFE2L3Q9Y4A8 694 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 NRKQ7Z2Y5 1582 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 STRCP1A6NGW2 1772 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 AKAP12Q02952 1782 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 MON2Q7Z3U7 1717 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 MYOM1P52179 1685 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 BCL9LQ86UU0 1499 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 C17orf113A0A1B0GUU1 675 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 A0A1B0GVL5 298 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 ABHD14A-ACY1A0A1B0GW23 586 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 PVALEFA0A1B0GWK0 134 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 TCRBV5S1A1TA0A578 114 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 ARHGAP10A1A4S6 786 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 MAGEB16A2A368 324 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 FAM234BA2RU67 622 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 VPS37CA5D8V6 355 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 LRRC72A6NJI9 287 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 GOLGA8JA6NMD2 632 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 ERVV-1B6SEH8 477 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 F5H423 210 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 H3BQV1 296 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 FBP2O00757 339 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 ADAMTS3O15072 1205 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 ZW10O43264 779 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 PIP5K1CO60331 668 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 N4BP1O75113 896 aaKnown RBP4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 KLHL2O95198 593 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 LATS1O95835 1130 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 HMGN1P05114 100 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 PRR35P0CG20 571 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 ARP10275 920 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 ZNF12P17014 697 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 ATF6P18850 670 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 HNF1BP35680 557 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 ATP6V1E1P36543 226 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 IGHMBP2P38935 993 aaKnown RBP4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 SLC1A1P43005 524 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 HSPA7P48741 367 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 RGS7P49802 495 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 ETV1P50549 477 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 CCT4P50991 539 aaKnown RBP4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 AP3M2P53677 418 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 RCAN1P53805 252 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 SRP54P61011 504 aaKnown RBP4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 GPC5P78333 572 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 RPP38P78345 283 aaKnown RBP4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 PLIN5Q00G26 463 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 CDK18Q07002 472 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 CKAP4Q07065 602 aaKnown RBP4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 CUL4AQ13619 759 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 TRIM14Q14142 442 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 PTK2BQ14289 1009 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 ITIH4Q14624 930 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 TMEM95Q3KNT9 176 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 CFAP221Q4G0U5 840 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 CDONQ4KMG0 1287 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 ALFQ53S48 1182 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 INO80DQ53TQ3 878 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 RILPL1Q5EBL4 403 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 MTX3Q5HYI7 312 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 METTL21CQ5VZV1 264 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 KCTD16Q68DU8 428 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 OR52E8Q6IFG1 317 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 SLC18B1Q6NT16 456 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 METTL2BQ6P1Q9 378 aaKnown RBP4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 RBM43Q6ZSC3 357 aaKnown RBP4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 IKBIPQ70UQ0 350 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 ATG9AQ7Z3C6 839 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 ADCK1Q86TW2 530 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 ITIH5Q86UX2 942 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 CNGA4Q8IV77 575 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 NRSN1Q8IZ57 195 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 NOA1Q8NC60 698 aaKnown RBP4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 PPHLN1Q8NEY8 458 aaKnown RBP4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 OR52K2Q8NGK3 314 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 DENND1AQ8TEH3 1009 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 PIGOQ8TEQ8 1089 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 AGAP11Q8TF27 550 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 POF1BQ8WVV4 589 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 SEPT1Q8WYJ6 367 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 HERVK_113Q902F9 699 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 PIGBQ92521 554 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 SMG7Q92540 1137 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms