RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 CBX2Q14781 532 aaPredicted RBP13.7□□□□□ -0.22
NPHP4-207ENST00000470763 LY6KQ17RY6 165 aa13.7□□□□□ -0.22
NPHP4-207ENST00000470763 LRIT3Q3SXY7 679 aa13.7□□□□□ -0.22
NPHP4-207ENST00000470763 SLC25A52Q3SY17 297 aa13.7□□□□□ -0.22
NPHP4-207ENST00000470763 PAGE3Q5JUK9 113 aa13.7□□□□□ -0.22
NPHP4-207ENST00000470763 RBM48Q5RL73 367 aaKnown RBP13.7□□□□□ -0.22
NPHP4-207ENST00000470763 SYPL2Q5VXT5 272 aa13.7□□□□□ -0.22
NPHP4-207ENST00000470763 ARHGAP17Q68EM7 881 aa13.7□□□□□ -0.22
NPHP4-207ENST00000470763 C14orf80Q86SX3 495 aa13.7□□□□□ -0.22
NPHP4-207ENST00000470763 RBM23Q86U06 439 aaKnown RBP13.7□□□□□ -0.22
NPHP4-207ENST00000470763 ARMC8Q8IUR7 673 aa13.7□□□□□ -0.22
NPHP4-207ENST00000470763 MTMR14Q8NCE2 650 aa13.7□□□□□ -0.22
NPHP4-207ENST00000470763 ACAD9Q9H845 621 aa13.7□□□□□ -0.22
NPHP4-207ENST00000470763 PARVBQ9HBI1 364 aa13.7□□□□□ -0.22
NPHP4-207ENST00000470763 TRPV5Q9NQA5 729 aa13.7□□□□□ -0.22
NPHP4-207ENST00000470763 PIGVQ9NUD9 493 aa13.7□□□□□ -0.22
NPHP4-207ENST00000470763 SNX10Q9Y5X0 201 aa13.7□□□□□ -0.22
NPHP4-207ENST00000470763 OAS3Q9Y6K5 1087 aaKnown RBP13.7□□□□□ -0.22
NPHP4-207ENST00000470763 MYLKQ15746 1914 aa13.7□□□□□ -0.22
NPHP4-207ENST00000470763 A0A087X1B8 175 aa13.7□□□□□ -0.22
NPHP4-207ENST00000470763 LINC00032P0C843 101 aa13.7□□□□□ -0.22
NPHP4-207ENST00000470763 HRH2P25021 359 aa13.7□□□□□ -0.22
NPHP4-207ENST00000470763 MZF1P28698 734 aaPredicted RBP13.7□□□□□ -0.22
NPHP4-207ENST00000470763 SH3BP2P78314 561 aa13.7□□□□□ -0.22
NPHP4-207ENST00000470763 ADIGQ0VDE8 80 aa13.7□□□□□ -0.22
NPHP4-207ENST00000470763 DGCR6Q14129 220 aa13.7□□□□□ -0.22
NPHP4-207ENST00000470763 NAPEPLDQ6IQ20 393 aa13.7□□□□□ -0.22
NPHP4-207ENST00000470763 PKN3Q6P5Z2 889 aa13.7□□□□□ -0.22
NPHP4-207ENST00000470763 RALGPS2Q86X27 583 aaPredicted RBP13.7□□□□□ -0.22
NPHP4-207ENST00000470763 ATP6V0D2Q8N8Y2 350 aa13.7□□□□□ -0.22
NPHP4-207ENST00000470763 GOLM1Q8NBJ4 401 aa13.7□□□□□ -0.22
NPHP4-207ENST00000470763 VMP1Q96GC9 406 aa13.7□□□□□ -0.22
NPHP4-207ENST00000470763 ZNF486Q96H40 463 aaPredicted RBP13.7□□□□□ -0.22
NPHP4-207ENST00000470763 TEX37Q96LM6 180 aa13.7□□□□□ -0.22
NPHP4-207ENST00000470763 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.7□□□□□ -0.22
NPHP4-207ENST00000470763 CITO14578 2027 aa13.7□□□□□ -0.22
NPHP4-207ENST00000470763 ERI2A8K979 691 aaKnown RBP13.69□□□□□ -0.22
NPHP4-207ENST00000470763 SNPHO15079 494 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 XPNPEP2O43895 674 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 SIX3O95343 332 aaPredicted RBP13.69□□□□□ -0.22
NPHP4-207ENST00000470763 DLGAP3O95886 979 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 EIF2S1P05198 315 aaKnown RBP13.69□□□□□ -0.22
NPHP4-207ENST00000470763 HGFP14210 728 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 CD40LGP29965 261 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 ATP4BP51164 291 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 OR4D2P58180 307 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 ARPC4P59998 168 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 COPZ1P61923 177 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 CD47Q08722 323 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 BST2Q10589 180 aaKnown RBP13.69□□□□□ -0.22
NPHP4-207ENST00000470763 MOB2Q70IA6 237 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 REPS2Q8NFH8 660 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 CLIP3Q96DZ5 547 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 DACH2Q96NX9 599 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 TRIT1Q9H3H1 467 aaKnown RBP13.69□□□□□ -0.22
NPHP4-207ENST00000470763 INTS7Q9NVH2 962 aaKnown RBP13.69□□□□□ -0.22
NPHP4-207ENST00000470763 PNMA8BQ9ULN7 279 aaPredicted RBP13.69□□□□□ -0.22
NPHP4-207ENST00000470763 SPO11Q9Y5K1 396 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 AP3B1O00203 1094 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 UPK1AO00322 258 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 LRIG2O94898 1065 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 TPI1P60174 286 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 NCS1P62166 190 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 AGAP9Q5VTM2 703 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 TAS2R42Q7RTR8 314 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 PAGE2Q7Z2X7 111 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 ABI1Q8IZP0 508 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 C2orf69Q8N8R5 385 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 OR6Q1Q8NGQ2 317 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 AFG1LQ8WV93 481 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 TRIB2Q92519 343 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 HDAC2Q92769 488 aaKnown RBP13.69□□□□□ -0.22
NPHP4-207ENST00000470763 NODALQ96S42 347 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 MID1IP1Q9NPA3 183 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 THG1LQ9NWX6 298 aaKnown RBP13.69□□□□□ -0.22
NPHP4-207ENST00000470763 FBXO5Q9UKT4 447 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 I6L893 689 aaPredicted RBP13.69□□□□□ -0.22
NPHP4-207ENST00000470763 NUAK1O60285 661 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 SEC24AO95486 1093 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 LTA4HP09960 611 aaKnown RBP13.69□□□□□ -0.22
NPHP4-207ENST00000470763 ILF2Q12905 390 aaKnown RBP13.69□□□□□ -0.22
NPHP4-207ENST00000470763 LAPTM5Q13571 262 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 FBXO48Q5FWF7 155 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 EFCAB12Q6NXP0 572 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 DCP1BQ8IZD4 617 aaKnown RBP13.69□□□□□ -0.22
NPHP4-207ENST00000470763 RYBPQ8N488 228 aaPredicted RBP13.69□□□□□ -0.22
NPHP4-207ENST00000470763 LEMD2Q8NC56 503 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 LILRB4Q8NHJ6 448 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 TWIST2Q8WVJ9 160 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 AMBRA1Q9C0C7 1298 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 ASB7Q9H672 318 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 ITM2CQ9NQX7 267 aa13.69□□□□□ -0.22
NPHP4-207ENST00000470763 MIA3Q5JRA6 1907 aa13.68□□□□□ -0.22
NPHP4-207ENST00000470763 A0A1W2PQ67 120 aa13.68□□□□□ -0.22
NPHP4-207ENST00000470763 ASPDHA6ND91 283 aa13.68□□□□□ -0.22
NPHP4-207ENST00000470763 ASNA1O43681 348 aa13.68□□□□□ -0.22
NPHP4-207ENST00000470763 LMO2P25791 158 aa13.68□□□□□ -0.22
NPHP4-207ENST00000470763 CHRNA4P43681 627 aa13.68□□□□□ -0.22
NPHP4-207ENST00000470763 NDUFV1P49821 464 aa13.68□□□□□ -0.22
NPHP4-207ENST00000470763 RABGGTBP53611 331 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms