RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 S100ZQ8WXG8 99 aa13.9□□□□□ -0.18
VPS52-212ENST00000445902 TEKT5Q96M29 485 aa13.9□□□□□ -0.18
VPS52-212ENST00000445902 DACH2Q96NX9 599 aa13.9□□□□□ -0.18
VPS52-212ENST00000445902 GMLQ99445 158 aa13.9□□□□□ -0.18
VPS52-212ENST00000445902 TBL1YQ9BQ87 522 aa13.9□□□□□ -0.18
VPS52-212ENST00000445902 RMND5AQ9H871 391 aa13.9□□□□□ -0.18
VPS52-212ENST00000445902 IFT52Q9Y366 437 aa13.9□□□□□ -0.18
VPS52-212ENST00000445902 SBF1O95248 1867 aa13.9□□□□□ -0.19
VPS52-212ENST00000445902 IGKV6-21A0A0C4DH24 114 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 C16orf96A6NNT2 1141 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 DFFAO00273 331 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 UPK1AO00322 258 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 GUCY1B2O75343 617 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 CAMK2BQ13554 666 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 PCSK7Q16549 785 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 RBM48Q5RL73 367 aaKnown RBP13.89□□□□□ -0.19
VPS52-212ENST00000445902 PRAMEF18Q5VWM3 479 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 PAGE2Q7Z2X7 111 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 DCP1BQ8IZD4 617 aaKnown RBP13.89□□□□□ -0.19
VPS52-212ENST00000445902 PPHLN1Q8NEY8 458 aaKnown RBP13.89□□□□□ -0.19
VPS52-212ENST00000445902 AFG1LQ8WV93 481 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 NODALQ96S42 347 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 AMBRA1Q9C0C7 1298 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 TUBB1Q9H4B7 451 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 ZNF639Q9UID6 485 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 INVSQ9Y283 1065 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 TIMM22Q9Y584 194 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 SNPHO15079 494 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 IMPDH1P20839 514 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 PRKACGP22612 351 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 HOXD11P31277 338 aaPredicted RBP13.89□□□□□ -0.19
VPS52-212ENST00000445902 MTHFRP42898 656 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 CXCR3P49682 368 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 ATP4BP51164 291 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 COPZ1P61923 177 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 POU4F1Q01851 419 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 SNX17Q15036 470 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 LRIT3Q3SXY7 679 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 SMUG1Q53HV7 270 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 GLYATQ6IB77 296 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 PDZD4Q76G19 769 aaPredicted RBP13.89□□□□□ -0.19
VPS52-212ENST00000445902 CYP2U1Q7Z449 544 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 FAM86B1Q8N7N1 296 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 CNIH3Q8TBE1 160 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 COPS5Q92905 334 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 CCDC126Q96EE4 140 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 ZNF419Q96HQ0 510 aaPredicted RBP13.89□□□□□ -0.19
VPS52-212ENST00000445902 C12orf42Q96LP6 360 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 HOXD1Q9GZZ0 328 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 C8orf4Q9NR00 106 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 PRMT7Q9NVM4 692 aaPredicted RBP13.89□□□□□ -0.19
VPS52-212ENST00000445902 FAM118AQ9NWS6 357 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 POLG2Q9UHN1 485 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 NUDT5Q9UKK9 219 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 UTS2RQ9UKP6 389 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 AKT3Q9Y243 479 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 CNTN5O94779 1100 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 CDK14O94921 469 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 SEC24AO95486 1093 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 CYP2C8P10632 490 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 SPNP16150 400 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 PTPRAP18433 802 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 MZF1P28698 734 aaPredicted RBP13.89□□□□□ -0.19
VPS52-212ENST00000445902 CD40LGP29965 261 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 ADRA1BP35368 520 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 CCNA1P78396 465 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 LAIR2Q6ISS4 152 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 BLOC1S3Q6QNY0 202 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 TMEM207Q6UWW9 146 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 USP43Q70EL4 1123 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 ARMC8Q8IUR7 673 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 CNTN4Q8IWV2 1026 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 CLYBLQ8N0X4 340 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 MINDY2Q8NBR6 621 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 C2CD4AQ8NCU7 369 aaPredicted RBP13.89□□□□□ -0.19
VPS52-212ENST00000445902 HDAC2Q92769 488 aaKnown RBP13.89□□□□□ -0.19
VPS52-212ENST00000445902 FAM167AQ96KS9 214 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 NSMCE2Q96MF7 247 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 TRIT1Q9H3H1 467 aaKnown RBP13.89□□□□□ -0.19
VPS52-212ENST00000445902 PRDM8Q9NQV8 689 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 WDR70Q9NW82 654 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 GINS2Q9Y248 185 aa13.89□□□□□ -0.19
VPS52-212ENST00000445902 SYCE1LA8MT33 242 aa13.88□□□□□ -0.19
VPS52-212ENST00000445902 ZNF99A8MXY4 864 aaPredicted RBP13.88□□□□□ -0.19
VPS52-212ENST00000445902 TBX1O43435 398 aa13.88□□□□□ -0.19
VPS52-212ENST00000445902 TBC1D4O60343 1298 aa13.88□□□□□ -0.19
VPS52-212ENST00000445902 PARNO95453 639 aaKnown RBP13.88□□□□□ -0.19
VPS52-212ENST00000445902 C1RP00736 705 aa13.88□□□□□ -0.19
VPS52-212ENST00000445902 KCNK10P57789 538 aa13.88□□□□□ -0.19
VPS52-212ENST00000445902 MTPNP58546 118 aa13.88□□□□□ -0.19
VPS52-212ENST00000445902 UFM1P61960 85 aa13.88□□□□□ -0.19
VPS52-212ENST00000445902 TNFAIP2Q03169 654 aa13.88□□□□□ -0.19
VPS52-212ENST00000445902 UBE2UQ5VVX9 321 aa13.88□□□□□ -0.19
VPS52-212ENST00000445902 TAS2R42Q7RTR8 314 aa13.88□□□□□ -0.19
VPS52-212ENST00000445902 MMAAQ8IVH4 418 aaKnown RBP13.88□□□□□ -0.19
VPS52-212ENST00000445902 PTGR2Q8N8N7 351 aaPredicted RBP13.88□□□□□ -0.19
VPS52-212ENST00000445902 OR6Q1Q8NGQ2 317 aa13.88□□□□□ -0.19
VPS52-212ENST00000445902 RPL3LQ92901 407 aaKnown RBP13.88□□□□□ -0.19
VPS52-212ENST00000445902 PTERQ96BW5 349 aa13.88□□□□□ -0.19
VPS52-212ENST00000445902 ZNF486Q96H40 463 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms