RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 COMTP21964 271 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 DNASE1P24855 282 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 ADRA1BP35368 520 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 FOLR3P41439 243 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 TDO2P48775 406 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 CLCNKBP51801 687 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 ATXN3P54252 364 aaPredicted RBP5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 NME5P56597 212 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 ST8SIA6P61647 398 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 PDK1Q15118 436 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 TRADDQ15628 312 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 SOWAHAQ2M3V2 549 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 FUT11Q495W5 492 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 AARDQ4LEZ3 155 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 ESCO2Q56NI9 601 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 ZNF789Q5FWF6 425 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 PLAC9Q5JTB6 97 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 KCNT1Q5JUK3 1230 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 KRT39Q6A163 491 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 SLC27A1Q6PCB7 646 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 ATG14Q6ZNE5 492 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 LINGO2Q7L985 606 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 SPATA21Q7Z572 469 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 ZBTB2Q8N680 514 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 MCPH1Q8NEM0 835 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 SPATA18Q8TC71 538 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 BCAS4Q8TDM0 211 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 SLC13A3Q8WWT9 602 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 KAT2AQ92830 837 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 GAL3ST4Q96RP7 486 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 CRAMP1Q96RY5 1269 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 ZNF304Q9HCX3 659 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 PNPLA3Q9NST1 481 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 HEY2Q9UBP5 337 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 ITGA11Q9UKX5 1188 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 AP1M2Q9Y6Q5 423 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 TCRBV5S1A1TA0A578 114 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 TMEM8BA6NDV4 472 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 DDTLA6NHG4 134 aaPredicted RBP5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 UNC119BA6NIH7 251 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 PTGESO14684 152 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 MAP2K7O14733 419 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 RNMTO43148 476 aaKnown RBP5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 APBB3O95704 486 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 SLC16A8O95907 504 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 ICAM1P05362 532 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 MMP2P08253 660 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 VPREB1P12018 145 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 CYP11B2P19099 503 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 NR2F2P24468 414 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 TKTP29401 623 aaKnown RBP5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 ACAA2P42765 397 aaKnown RBP5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 MATR3P43243 847 aaKnown RBP eCLIP5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 CAMLGP49069 296 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 PTENP60484 403 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 SREBF2Q12772 1141 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 NAE1Q13564 534 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 KPNB1Q14974 876 aaKnown RBP5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 SGCBQ16585 318 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 SMN1Q16637 294 aaKnown RBP5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 C2orf68Q2NKX9 166 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 ZXDCQ2QGD7 858 aaPredicted RBP5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 AARS2Q5JTZ9 985 aaKnown RBP5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 NT5DC1Q5TFE4 455 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 ETFRF1Q6IPR1 90 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 PAPD4Q6PIY7 484 aaKnown RBP5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 PQLC2Q6ZP29 291 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 ANKRD13BQ86YJ7 626 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 SAMD14Q8IZD0 417 aaPredicted RBP5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 TERB1Q8NA31 727 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 UXS1Q8NBZ7 420 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 LPCAT1Q8NF37 534 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 BEST2Q8NFU1 509 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 RASSF8Q8NHQ8 419 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 LRRC8CQ8TDW0 803 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 ATOH1Q92858 354 aaPredicted RBP5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 SNRNP40Q96DI7 357 aaKnown RBP5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 FAM89AQ96GI7 184 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 ZC3HAV1LQ96H79 300 aaKnown RBP5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 HES6Q96HZ4 224 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 MUS81Q96NY9 551 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 FAM111AQ96PZ2 611 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 RUFY1Q96T51 708 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 NTPCRQ9BSD7 190 aaKnown RBP5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 PIMREGQ9BSJ6 248 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 TEX13BQ9BXU2 312 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 PIGMQ9H3S5 423 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 ACTR5Q9H9F9 607 aaPredicted RBP5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 LMAN1LQ9HAT1 526 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 EPB41L5Q9HCM4 733 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 EQTNQ9NQ60 294 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 PRMT8Q9NR22 394 aaPredicted RBP5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 DNAJC11Q9NVH1 559 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 COMMD8Q9NX08 183 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 P4HTMQ9NXG6 502 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 NDRG3Q9UGV2 375 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 CHKBQ9Y259 395 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 TRIM17Q9Y577 477 aa5.26□□□□□ -1.57
TM9SF3-202ENST00000443638 IKBKGQ9Y6K9 419 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 254.1 ms