RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 MOV10Q9HCE1 1003 aaKnown RBP14.59□□□□□ -0.07
VPS36-207ENST00000611132 ZNF221Q9UK13 617 aa14.59□□□□□ -0.07
VPS36-207ENST00000611132 FZD1Q9UP38 647 aa14.59□□□□□ -0.07
VPS36-207ENST00000611132 MFHAS1Q9Y4C4 1052 aa14.59□□□□□ -0.07
VPS36-207ENST00000611132 GNG14A0A1W2PPG7 69 aa14.59□□□□□ -0.07
VPS36-207ENST00000611132 TPD52L2O43399 206 aaKnown RBP14.59□□□□□ -0.07
VPS36-207ENST00000611132 RHOCP08134 193 aa14.59□□□□□ -0.07
VPS36-207ENST00000611132 RAP2AP10114 183 aa14.59□□□□□ -0.07
VPS36-207ENST00000611132 PIK3CGP48736 1102 aa14.59□□□□□ -0.07
VPS36-207ENST00000611132 NFE2Q16621 373 aaPredicted RBP14.59□□□□□ -0.07
VPS36-207ENST00000611132 MAP1SQ66K74 1059 aaPredicted RBP14.59□□□□□ -0.07
VPS36-207ENST00000611132 IQSEC1Q6DN90 963 aa14.59□□□□□ -0.07
VPS36-207ENST00000611132 CNSTQ6PJW8 725 aa14.59□□□□□ -0.07
VPS36-207ENST00000611132 SLC44A2Q8IWA5 706 aaPredicted RBP14.59□□□□□ -0.07
VPS36-207ENST00000611132 STK40Q8N2I9 435 aa14.59□□□□□ -0.07
VPS36-207ENST00000611132 STYXQ8WUJ0 223 aa14.59□□□□□ -0.07
VPS36-207ENST00000611132 CNTN3Q9P232 1028 aa14.59□□□□□ -0.07
VPS36-207ENST00000611132 ELOVL7A1L3X0 281 aa14.59□□□□□ -0.07
VPS36-207ENST00000611132 PRR23D1E9PI22 279 aaPredicted RBP14.59□□□□□ -0.07
VPS36-207ENST00000611132 AHSGP02765 367 aa14.59□□□□□ -0.07
VPS36-207ENST00000611132 PRR23D2P0DMB1 279 aaPredicted RBP14.59□□□□□ -0.07
VPS36-207ENST00000611132 PWP1Q13610 501 aa14.59□□□□□ -0.07
VPS36-207ENST00000611132 C17orf50Q8WW18 174 aa14.59□□□□□ -0.07
VPS36-207ENST00000611132 SELENOMQ8WWX9 145 aa14.59□□□□□ -0.07
VPS36-207ENST00000611132 MLPHQ9BV36 600 aaPredicted RBP14.59□□□□□ -0.07
VPS36-207ENST00000611132 OXCT2Q9BYC2 517 aaPredicted RBP14.59□□□□□ -0.07
VPS36-207ENST00000611132 RASSF1Q9NS23 344 aa14.59□□□□□ -0.07
VPS36-207ENST00000611132 TMED5Q9Y3A6 229 aa14.59□□□□□ -0.07
VPS36-207ENST00000611132 IPPQ9Y573 584 aa14.59□□□□□ -0.07
VPS36-207ENST00000611132 PTCH2Q9Y6C5 1203 aa14.59□□□□□ -0.07
VPS36-207ENST00000611132 FBP2O00757 339 aa14.59□□□□□ -0.07
VPS36-207ENST00000611132 RSL1D1O76021 490 aaKnown RBP14.59□□□□□ -0.07
VPS36-207ENST00000611132 IMPDH1P20839 514 aa14.59□□□□□ -0.07
VPS36-207ENST00000611132 CHI3L1P36222 383 aaPredicted RBP14.59□□□□□ -0.07
VPS36-207ENST00000611132 AFTPHQ6ULP2 937 aa14.59□□□□□ -0.07
VPS36-207ENST00000611132 SVOPLQ8N434 492 aa14.59□□□□□ -0.07
VPS36-207ENST00000611132 TOP6BLQ8N6T0 577 aa14.59□□□□□ -0.07
VPS36-207ENST00000611132 FEM1CQ96JP0 617 aa14.59□□□□□ -0.07
VPS36-207ENST00000611132 FBXO44Q9H4M3 255 aa14.59□□□□□ -0.07
VPS36-207ENST00000611132 AKTIPQ9H8T0 292 aa14.59□□□□□ -0.07
VPS36-207ENST00000611132 SH3BP4Q9P0V3 963 aa14.59□□□□□ -0.07
VPS36-207ENST00000611132 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.59□□□□□ -0.07
VPS36-207ENST00000611132 SYNDIG1LA6NDD5 238 aa14.58□□□□□ -0.07
VPS36-207ENST00000611132 SLC22A1O15245 554 aa14.58□□□□□ -0.07
VPS36-207ENST00000611132 ENDOD1O94919 500 aa14.58□□□□□ -0.07
VPS36-207ENST00000611132 IRF1P10914 325 aa14.58□□□□□ -0.07
VPS36-207ENST00000611132 EEFSECP57772 596 aaKnown RBP14.58□□□□□ -0.07
VPS36-207ENST00000611132 AP5B1Q2VPB7 878 aa14.58□□□□□ -0.07
VPS36-207ENST00000611132 ZFP69Q49AA0 526 aa14.58□□□□□ -0.07
VPS36-207ENST00000611132 ZNF772Q68DY9 489 aaPredicted RBP14.58□□□□□ -0.07
VPS36-207ENST00000611132 FAR1Q8WVX9 515 aa14.58□□□□□ -0.07
VPS36-207ENST00000611132 KAT8Q9H7Z6 458 aaKnown RBP14.58□□□□□ -0.07
VPS36-207ENST00000611132 RPRD1BQ9NQG5 326 aaKnown RBP14.58□□□□□ -0.07
VPS36-207ENST00000611132 FGF1P05230 155 aa14.58□□□□□ -0.08
VPS36-207ENST00000611132 MZF1P28698 734 aaPredicted RBP14.58□□□□□ -0.08
VPS36-207ENST00000611132 TTPAP49638 278 aa14.58□□□□□ -0.08
VPS36-207ENST00000611132 GSK3BP49841 420 aa14.58□□□□□ -0.08
VPS36-207ENST00000611132 NRG1Q02297 640 aaPredicted RBP14.58□□□□□ -0.08
VPS36-207ENST00000611132 OLIG2Q13516 323 aa14.58□□□□□ -0.08
VPS36-207ENST00000611132 GJC2Q5T442 439 aaPredicted RBP14.58□□□□□ -0.08
VPS36-207ENST00000611132 MFSD4BQ5TF39 518 aa14.58□□□□□ -0.08
VPS36-207ENST00000611132 TYW3Q6IPR3 259 aaKnown RBP14.58□□□□□ -0.08
VPS36-207ENST00000611132 ZNF773Q6PK81 442 aa14.58□□□□□ -0.08
VPS36-207ENST00000611132 ADAMTSL2Q86TH1 951 aa14.58□□□□□ -0.08
VPS36-207ENST00000611132 DEPDC4Q8N2C3 294 aa14.58□□□□□ -0.08
VPS36-207ENST00000611132 LOC110117498-PIK3R3F6TDL0 507 aa14.58□□□□□ -0.08
VPS36-207ENST00000611132 FOXD2O60548 495 aaPredicted RBP14.58□□□□□ -0.08
VPS36-207ENST00000611132 TFAP2AP05549 437 aa14.58□□□□□ -0.08
VPS36-207ENST00000611132 DNAJB1P25685 340 aa14.58□□□□□ -0.08
VPS36-207ENST00000611132 SCNN1AP37088 669 aa14.58□□□□□ -0.08
VPS36-207ENST00000611132 CYP4F2P78329 520 aa14.58□□□□□ -0.08
VPS36-207ENST00000611132 CYP4F3Q08477 520 aa14.58□□□□□ -0.08
VPS36-207ENST00000611132 RAB39AQ14964 217 aa14.58□□□□□ -0.08
VPS36-207ENST00000611132 VEPH1Q14D04 833 aa14.58□□□□□ -0.08
VPS36-207ENST00000611132 BRMS1LQ5PSV4 323 aa14.58□□□□□ -0.08
VPS36-207ENST00000611132 PPP4R4Q6NUP7 873 aa14.58□□□□□ -0.08
VPS36-207ENST00000611132 ZUFSPQ96AP4 578 aa14.58□□□□□ -0.08
VPS36-207ENST00000611132 SH3KBP1Q96B97 665 aa14.58□□□□□ -0.08
VPS36-207ENST00000611132 KLHL5Q96PQ7 755 aa14.58□□□□□ -0.08
VPS36-207ENST00000611132 CCDC182A6NF36 153 aa14.58□□□□□ -0.08
VPS36-207ENST00000611132 TNFRSF21O75509 655 aa14.58□□□□□ -0.08
VPS36-207ENST00000611132 TUBA3CQ13748 450 aa14.58□□□□□ -0.08
VPS36-207ENST00000611132 TGFBIQ15582 683 aa14.58□□□□□ -0.08
VPS36-207ENST00000611132 TSTD2Q5T7W7 516 aa14.58□□□□□ -0.08
VPS36-207ENST00000611132 CASP12Q6UXS9 341 aa14.58□□□□□ -0.08
VPS36-207ENST00000611132 SYT12Q8IV01 421 aa14.58□□□□□ -0.08
VPS36-207ENST00000611132 MTFMTQ96DP5 389 aaKnown RBP14.58□□□□□ -0.08
VPS36-207ENST00000611132 GAD1Q99259 594 aa14.58□□□□□ -0.08
VPS36-207ENST00000611132 LRRC3Q9BY71 257 aa14.58□□□□□ -0.08
VPS36-207ENST00000611132 NXF3Q9H4D5 531 aaKnown RBP14.58□□□□□ -0.08
VPS36-207ENST00000611132 DNAJB9Q9UBS3 223 aa14.58□□□□□ -0.08
VPS36-207ENST00000611132 EBF1Q9UH73 591 aa14.58□□□□□ -0.08
VPS36-207ENST00000611132 ZNF487B1APH4 448 aa14.57□□□□□ -0.08
VPS36-207ENST00000611132 BTBD19C9JJ37 291 aa14.57□□□□□ -0.08
VPS36-207ENST00000611132 SLC28A1O00337 649 aa14.57□□□□□ -0.08
VPS36-207ENST00000611132 CPT1AP50416 773 aa14.57□□□□□ -0.08
VPS36-207ENST00000611132 RHOAP61586 193 aa14.57□□□□□ -0.08
VPS36-207ENST00000611132 MYBPC1Q00872 1141 aa14.57□□□□□ -0.08
VPS36-207ENST00000611132 FBXO48Q5FWF7 155 aa14.57□□□□□ -0.08
VPS36-207ENST00000611132 CENPIQ92674 756 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms