RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 AGAP2Q99490 1192 aa14.89□□□□□ -0.03
NUP54-213ENST00000513352 ZSCAN5AQ9BUG6 496 aa14.89□□□□□ -0.03
NUP54-213ENST00000513352 SMOC1Q9H4F8 434 aa14.89□□□□□ -0.03
NUP54-213ENST00000513352 IL26Q9NPH9 171 aa14.89□□□□□ -0.03
NUP54-213ENST00000513352 RRAGDQ9NQL2 400 aaPredicted RBP14.89□□□□□ -0.03
NUP54-213ENST00000513352 PHPT1Q9NRX4 125 aaPredicted RBP14.89□□□□□ -0.03
NUP54-213ENST00000513352 MTRF1LQ9UGC7 380 aaKnown RBP14.89□□□□□ -0.03
NUP54-213ENST00000513352 APPL1Q9UKG1 709 aa14.89□□□□□ -0.03
NUP54-213ENST00000513352 CHMP2BQ9UQN3 213 aa14.89□□□□□ -0.03
NUP54-213ENST00000513352 PCDHGA5Q9Y5G8 931 aa14.89□□□□□ -0.03
NUP54-213ENST00000513352 HS3ST3A1Q9Y663 406 aa14.89□□□□□ -0.03
NUP54-213ENST00000513352 SLC30A1Q9Y6M5 507 aa14.89□□□□□ -0.03
NUP54-213ENST00000513352 A0A1B0GVT2 93 aa14.88□□□□□ -0.03
NUP54-213ENST00000513352 CACNB4O00305 520 aaPredicted RBP14.88□□□□□ -0.03
NUP54-213ENST00000513352 PRAMEF1O95521 474 aa14.88□□□□□ -0.03
NUP54-213ENST00000513352 WNT1P04628 370 aa14.88□□□□□ -0.03
NUP54-213ENST00000513352 PYGLP06737 847 aa14.88□□□□□ -0.03
NUP54-213ENST00000513352 RETP07949 1114 aa14.88□□□□□ -0.03
NUP54-213ENST00000513352 ITGALP20701 1170 aa14.88□□□□□ -0.03
NUP54-213ENST00000513352 NMBRP28336 390 aa14.88□□□□□ -0.03
NUP54-213ENST00000513352 MC4RP32245 332 aa14.88□□□□□ -0.03
NUP54-213ENST00000513352 HOXD12P35452 270 aa14.88□□□□□ -0.03
NUP54-213ENST00000513352 RABIFP47224 123 aa14.88□□□□□ -0.03
NUP54-213ENST00000513352 TRIM61Q5EBN2 209 aa14.88□□□□□ -0.03
NUP54-213ENST00000513352 DOK6Q6PKX4 331 aa14.88□□□□□ -0.03
NUP54-213ENST00000513352 ZDHHC24Q6UX98 284 aa14.88□□□□□ -0.03
NUP54-213ENST00000513352 ABI3BPQ7Z7G0 1075 aa14.88□□□□□ -0.03
NUP54-213ENST00000513352 AGGF1Q8N302 714 aaeCLIP14.88□□□□□ -0.03
NUP54-213ENST00000513352 TRAM1L1Q8N609 369 aa14.88□□□□□ -0.03
NUP54-213ENST00000513352 MFSD2AQ8NA29 543 aa14.88□□□□□ -0.03
NUP54-213ENST00000513352 OR6P1Q8NGX9 317 aa14.88□□□□□ -0.03
NUP54-213ENST00000513352 C1orf216Q8TAB5 229 aa14.88□□□□□ -0.03
NUP54-213ENST00000513352 CEP76Q8TAP6 659 aa14.88□□□□□ -0.03
NUP54-213ENST00000513352 HDAC10Q969S8 669 aa14.88□□□□□ -0.03
NUP54-213ENST00000513352 TBATAQ96M53 351 aa14.88□□□□□ -0.03
NUP54-213ENST00000513352 TRIM56Q9BRZ2 755 aaKnown RBP14.88□□□□□ -0.03
NUP54-213ENST00000513352 APOOQ9BUR5 198 aa14.88□□□□□ -0.03
NUP54-213ENST00000513352 KIFC1Q9BW19 673 aa14.88□□□□□ -0.03
NUP54-213ENST00000513352 SUDS3Q9H7L9 328 aaPredicted RBP14.88□□□□□ -0.03
NUP54-213ENST00000513352 MRM3Q9HC36 420 aaKnown RBP14.88□□□□□ -0.03
NUP54-213ENST00000513352 SAYSD1Q9NPB0 183 aa14.88□□□□□ -0.03
NUP54-213ENST00000513352 NFKBIL1Q9UBC1 381 aaPredicted RBP14.88□□□□□ -0.03
NUP54-213ENST00000513352 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.88□□□□□ -0.03
NUP54-213ENST00000513352 MOSPD1Q9UJG1 213 aa14.88□□□□□ -0.03
NUP54-213ENST00000513352 V9GYY5 206 aaPredicted RBP14.88□□□□□ -0.03
NUP54-213ENST00000513352 A0A1W2PR77 199 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 MAGEB16A2A368 324 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 OR51F1A6NGY5 319 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 FADS2P1A8MWK0 482 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 PATE3B3GLJ2 98 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 TP73O15350 636 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 GPR39O43194 453 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 UGT1A9O60656 530 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 MAGEC1O60732 1142 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 SRP72O76094 671 aaKnown RBP14.87□□□□□ -0.03
NUP54-213ENST00000513352 PGAM1P18669 254 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 PAMP19021 973 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 UGT1A6P19224 532 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 UGT1A1P22309 533 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 UGT1A4P22310 534 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 UGT1A3P35503 534 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 UGT1A5P35504 534 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 ELK3P41970 407 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 CARSP49589 748 aaKnown RBP14.87□□□□□ -0.03
NUP54-213ENST00000513352 ARSDP51689 593 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 NHLH1Q02575 133 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 CUL1Q13616 776 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 ITGA9Q13797 1035 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 PDE1CQ14123 709 aaPredicted RBP14.87□□□□□ -0.03
NUP54-213ENST00000513352 ATP13A5Q4VNC0 1218 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 AFTPHQ6ULP2 937 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 ADAMTSL4Q6UY14 1074 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 MICALCLQ6ZW33 695 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 TAS2R42Q7RTR8 314 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 TRIM74Q86UV6 250 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 ZBED8Q8IZ13 594 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 OR13J1Q8NGT2 312 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 FAM174AQ8TBP5 190 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 SEC14L1Q92503 715 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 UBXN4Q92575 508 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.87□□□□□ -0.03
NUP54-213ENST00000513352 MFSD3Q96ES6 412 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 CDKN2AIPNLQ96HQ2 116 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 SIGLEC10Q96LC7 697 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 PHOX2BQ99453 314 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 EBNA1BP2Q99848 306 aaKnown RBP14.87□□□□□ -0.03
NUP54-213ENST00000513352 NUSAP1Q9BXS6 441 aaKnown RBP14.87□□□□□ -0.03
NUP54-213ENST00000513352 FAM96AQ9H5X1 160 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 ASB8Q9H765 288 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 UGT1A7Q9HAW7 530 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 UGT1A10Q9HAW8 530 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 UGT1A8Q9HAW9 530 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 ARFGAP3Q9NP61 516 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 FSCN3Q9NQT6 498 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 CRLS1Q9UJA2 301 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 RIMKLBQ9ULI2 386 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 ANKRD6Q9Y2G4 727 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 RPS6KL1Q9Y6S9 549 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 ADAMTS9Q9P2N4 1935 aa14.87□□□□□ -0.03
NUP54-213ENST00000513352 FAM237BA0A1B0GVD1 139 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms