RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 TMEM125Q96AQ2 219 aa13.72□□□□□ -0.21
NPHP4-207ENST00000470763 C2orf40Q9H1Z8 148 aa13.72□□□□□ -0.21
NPHP4-207ENST00000470763 TOR3AQ9H497 397 aa13.72□□□□□ -0.21
NPHP4-207ENST00000470763 ABCB10Q9NRK6 738 aa13.72□□□□□ -0.21
NPHP4-207ENST00000470763 SLAMF8Q9P0V8 285 aa13.72□□□□□ -0.21
NPHP4-207ENST00000470763 PDE10AQ9Y233 779 aa13.72□□□□□ -0.21
NPHP4-207ENST00000470763 PCDHGA3Q9Y5H0 932 aa13.72□□□□□ -0.21
NPHP4-207ENST00000470763 PCDHA9Q9Y5H5 950 aa13.72□□□□□ -0.21
NPHP4-207ENST00000470763 NOBOXO60393 691 aa13.72□□□□□ -0.21
NPHP4-207ENST00000470763 KRT75O95678 551 aa13.72□□□□□ -0.21
NPHP4-207ENST00000470763 ARNTP27540 789 aa13.72□□□□□ -0.21
NPHP4-207ENST00000470763 HOXD11P31277 338 aaPredicted RBP13.72□□□□□ -0.21
NPHP4-207ENST00000470763 BMPR1AP36894 532 aa13.72□□□□□ -0.21
NPHP4-207ENST00000470763 TMEM132BQ14DG7 1078 aa13.72□□□□□ -0.21
NPHP4-207ENST00000470763 PAFAH1B3Q15102 231 aaKnown RBP13.72□□□□□ -0.21
NPHP4-207ENST00000470763 UGP2Q16851 508 aa13.72□□□□□ -0.21
NPHP4-207ENST00000470763 CTU2Q2VPK5 515 aaKnown RBP13.72□□□□□ -0.21
NPHP4-207ENST00000470763 SMUG1Q53HV7 270 aa13.72□□□□□ -0.21
NPHP4-207ENST00000470763 ADCK1Q86TW2 530 aa13.72□□□□□ -0.21
NPHP4-207ENST00000470763 MIER2Q8N344 545 aa13.72□□□□□ -0.21
NPHP4-207ENST00000470763 S100ZQ8WXG8 99 aa13.72□□□□□ -0.21
NPHP4-207ENST00000470763 TMBIM1Q969X1 311 aa13.72□□□□□ -0.21
NPHP4-207ENST00000470763 BIRC7Q96CA5 298 aa13.72□□□□□ -0.21
NPHP4-207ENST00000470763 BDH2Q9BUT1 245 aa13.72□□□□□ -0.21
NPHP4-207ENST00000470763 SMURF2Q9HAU4 748 aa13.72□□□□□ -0.21
NPHP4-207ENST00000470763 SPC25Q9HBM1 224 aa13.72□□□□□ -0.21
NPHP4-207ENST00000470763 HPS4Q9NQG7 708 aa13.72□□□□□ -0.21
NPHP4-207ENST00000470763 ZNF214Q9UL59 606 aaPredicted RBP13.72□□□□□ -0.21
NPHP4-207ENST00000470763 PMF1-BGLAPU3KQ54 211 aa13.72□□□□□ -0.21
NPHP4-207ENST00000470763 A0A087WZ62 844 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 M0QYT0 321 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 DCLK1O15075 740 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 GUCY1B2O75343 617 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 DEAF1O75398 565 aaPredicted RBP13.71□□□□□ -0.21
NPHP4-207ENST00000470763 MT-CYBP00156 380 aaPredicted RBP13.71□□□□□ -0.21
NPHP4-207ENST00000470763 CPB1P15086 417 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 SEPHS1P49903 392 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 FOXA1P55317 472 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 HUNKP57058 714 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 RBP5P82980 135 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 MBTD1Q05BQ5 628 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 PPP1R8Q12972 351 aaKnown RBP13.71□□□□□ -0.21
NPHP4-207ENST00000470763 ADPRMQ3LIE5 342 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 STRADAQ7RTN6 431 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 ZDHHC17Q8IUH5 632 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 HS3ST5Q8IZT8 346 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 KCNA7Q96RP8 456 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 ZIC5Q96T25 663 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 MIR1-1HGQ9H1L0 117 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 ALG9Q9H6U8 611 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 NTN4Q9HB63 628 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 C8orf4Q9NR00 106 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 RCOR3Q9P2K3 495 aaPredicted RBP13.71□□□□□ -0.21
NPHP4-207ENST00000470763 SLCO3A1Q9UIG8 710 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 TNFSF13BQ9Y275 285 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 BTRCQ9Y297 605 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 DNAJC15Q9Y5T4 150 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 PIP5K1BO14986 540 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 PIGAP37287 484 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 MATKP42679 507 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 TSPY1Q01534 308 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 NDUFA5Q16718 116 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 OTUD1Q5VV17 481 aaPredicted RBP13.71□□□□□ -0.21
NPHP4-207ENST00000470763 FAM160B1Q5W0V3 765 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 TAF2Q6P1X5 1199 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 MMAAQ8IVH4 418 aaKnown RBP13.71□□□□□ -0.21
NPHP4-207ENST00000470763 OSCP1Q8WVF1 389 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 ANKRD49Q8WVL7 239 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 MUL1Q969V5 352 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 KIF12Q96FN5 646 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 KIFC1Q9BW19 673 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 HOXD1Q9GZZ0 328 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 ATXN3LQ9H3M9 355 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.71□□□□□ -0.21
NPHP4-207ENST00000470763 SNX5Q9Y5X3 404 aa13.71□□□□□ -0.21
NPHP4-207ENST00000470763 LRRC14BA6NHZ5 514 aa13.71□□□□□ -0.22
NPHP4-207ENST00000470763 NDUFS2O75306 463 aa13.71□□□□□ -0.22
NPHP4-207ENST00000470763 ALPLP05186 524 aa13.71□□□□□ -0.22
NPHP4-207ENST00000470763 PTPN2P17706 415 aa13.71□□□□□ -0.22
NPHP4-207ENST00000470763 KCNC1P48547 511 aa13.71□□□□□ -0.22
NPHP4-207ENST00000470763 ALDH3A2P51648 485 aa13.71□□□□□ -0.22
NPHP4-207ENST00000470763 DIO3P55073 304 aa13.71□□□□□ -0.22
NPHP4-207ENST00000470763 DAG1Q14118 895 aa13.71□□□□□ -0.22
NPHP4-207ENST00000470763 SNX17Q15036 470 aa13.71□□□□□ -0.22
NPHP4-207ENST00000470763 C6orf141Q5SZD1 244 aa13.71□□□□□ -0.22
NPHP4-207ENST00000470763 USP43Q70EL4 1123 aa13.71□□□□□ -0.22
NPHP4-207ENST00000470763 CHDHQ8NE62 594 aaPredicted RBP13.71□□□□□ -0.22
NPHP4-207ENST00000470763 IPMKQ8NFU5 416 aa13.71□□□□□ -0.22
NPHP4-207ENST00000470763 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.71□□□□□ -0.229e-7■■■■■ 66.7
NPHP4-207ENST00000470763 TUBGCP3Q96CW5 907 aa13.71□□□□□ -0.22
NPHP4-207ENST00000470763 CELF6Q96J87 481 aaKnown RBP13.71□□□□□ -0.22
NPHP4-207ENST00000470763 MARCH7Q9H992 704 aa13.71□□□□□ -0.22
NPHP4-207ENST00000470763 PAK1IP1Q9NWT1 392 aaPredicted RBP13.71□□□□□ -0.22
NPHP4-207ENST00000470763 ZNF639Q9UID6 485 aa13.71□□□□□ -0.22
NPHP4-207ENST00000470763 MRPL42Q9Y6G3 142 aaKnown RBP13.71□□□□□ -0.22
NPHP4-207ENST00000470763 C16orf96A6NNT2 1141 aa13.7□□□□□ -0.22
NPHP4-207ENST00000470763 ZBTB42B2RXF5 422 aa13.7□□□□□ -0.22
NPHP4-207ENST00000470763 TGFBR1P36897 503 aa13.7□□□□□ -0.22
NPHP4-207ENST00000470763 KPNA2P52292 529 aaKnown RBP13.7□□□□□ -0.22
NPHP4-207ENST00000470763 SNX16P57768 344 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms