RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 NFKBIL1Q9UBC1 381 aaPredicted RBP30.43■■■□□ 2.46
CSNK1E-206ENST00000413574 SLC6A14Q9UN76 642 aa30.43■■■□□ 2.46
CSNK1E-206ENST00000413574 INPP4BO15327 924 aa30.42■■■□□ 2.46
CSNK1E-206ENST00000413574 TRIM23P36406 574 aa30.42■■■□□ 2.46
CSNK1E-206ENST00000413574 RABIFP47224 123 aa30.42■■■□□ 2.46
CSNK1E-206ENST00000413574 ARSDP51689 593 aa30.42■■■□□ 2.46
CSNK1E-206ENST00000413574 C21orf59P57076 290 aa30.42■■■□□ 2.46
CSNK1E-206ENST00000413574 CALCOCO2Q13137 446 aa30.42■■■□□ 2.46
CSNK1E-206ENST00000413574 PDE1CQ14123 709 aaPredicted RBP30.42■■■□□ 2.46
CSNK1E-206ENST00000413574 KIF19Q2TAC6 998 aa30.42■■■□□ 2.46
CSNK1E-206ENST00000413574 TSTD2Q5T7W7 516 aa30.42■■■□□ 2.46
CSNK1E-206ENST00000413574 CES3Q6UWW8 571 aa30.42■■■□□ 2.46
CSNK1E-206ENST00000413574 RABEPKQ7Z6M1 372 aa30.42■■■□□ 2.46
CSNK1E-206ENST00000413574 IQCHQ86VS3 1027 aa30.42■■■□□ 2.46
CSNK1E-206ENST00000413574 HEATR4Q86WZ0 1026 aa30.42■■■□□ 2.46
CSNK1E-206ENST00000413574 SPATS2Q86XZ4 545 aaKnown RBP30.42■■■□□ 2.46
CSNK1E-206ENST00000413574 BBOF1Q8ND07 529 aa30.42■■■□□ 2.46
CSNK1E-206ENST00000413574 STYXQ8WUJ0 223 aa30.42■■■□□ 2.46
CSNK1E-206ENST00000413574 RUBCNQ92622 972 aa30.42■■■□□ 2.46
CSNK1E-206ENST00000413574 CAAP1Q9H8G2 361 aa30.42■■■□□ 2.46
CSNK1E-206ENST00000413574 GLYATL1P3A0A0U1RQE8 302 aa30.41■■■□□ 2.46
CSNK1E-206ENST00000413574 PPFIA2O75334 1257 aa30.41■■■□□ 2.46
CSNK1E-206ENST00000413574 CA5AP35218 305 aa30.41■■■□□ 2.46
CSNK1E-206ENST00000413574 CHRNA6Q15825 494 aa30.41■■■□□ 2.46
CSNK1E-206ENST00000413574 CASC4Q6P4E1 433 aa30.41■■■□□ 2.46
CSNK1E-206ENST00000413574 OR13J1Q8NGT2 312 aa30.41■■■□□ 2.46
CSNK1E-206ENST00000413574 SIGLEC10Q96LC7 697 aa30.41■■■□□ 2.46
CSNK1E-206ENST00000413574 CDH19Q9H159 772 aa30.41■■■□□ 2.46
CSNK1E-206ENST00000413574 WDR26Q9H7D7 661 aa30.41■■■□□ 2.46
CSNK1E-206ENST00000413574 EPB41L5Q9HCM4 733 aa30.41■■■□□ 2.46
CSNK1E-206ENST00000413574 SEMA4GQ9NTN9 838 aa30.41■■■□□ 2.46
CSNK1E-206ENST00000413574 PLXNB3Q9ULL4 1909 aa30.41■■■□□ 2.46
CSNK1E-206ENST00000413574 SNX11Q9Y5W9 270 aa30.41■■■□□ 2.46
CSNK1E-206ENST00000413574 SDR42E2A6NKP2 422 aa30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 KHNYNO15037 678 aaKnown RBP30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 ZNF806P0C7X5 589 aa30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 NMBRP28336 390 aa30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 NXPH1P58417 271 aa30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 XIAPP98170 497 aa30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 GRIK2Q13002 908 aa30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 PEX6Q13608 980 aa30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 ATP13A5Q4VNC0 1218 aa30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 GLE1Q53GS7 698 aaKnown RBP30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 PRAMEF14Q5SWL7 426 aa30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 TRIM74Q86UV6 250 aa30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 TRAM1L1Q8N609 369 aa30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 TBATAQ96M53 351 aa30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 TEX101Q9BY14 249 aa30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 GPR27Q9NS67 375 aa30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 CNOT6Q9ULM6 557 aaKnown RBP30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 EP300Q09472 2414 aaPredicted RBP30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 UGT1A9O60656 530 aa30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 UGT1A6P19224 532 aa30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 UGT1A1P22309 533 aa30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 UGT1A4P22310 534 aa30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 UGT1A3P35503 534 aa30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 UGT1A5P35504 534 aa30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 PLTPP55058 493 aa30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 YPEL5P62699 121 aa30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 CDK3Q00526 305 aa30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 DHX9Q08211 1270 aaKnown RBP30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 OVGP1Q12889 678 aa30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 ZDHHC20Q5W0Z9 365 aa30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 ADAMTSL4Q6UY14 1074 aa30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 CDKN2AIPNLQ96HQ2 116 aa30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 ZSCAN5AQ9BUG6 496 aa30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 KIFC1Q9BW19 673 aa30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 NUSAP1Q9BXS6 441 aaKnown RBP30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 UGT1A7Q9HAW7 530 aa30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 UGT1A10Q9HAW8 530 aa30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 UGT1A8Q9HAW9 530 aa30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 TMPRSS11EQ9UL52 423 aa30.4■■■□□ 2.46
CSNK1E-206ENST00000413574 BHMG1C9JSJ3 638 aaPredicted RBP30.39■■■□□ 2.46
CSNK1E-206ENST00000413574 SMAPO00193 183 aa30.39■■■□□ 2.46
CSNK1E-206ENST00000413574 TGM1P22735 817 aa30.39■■■□□ 2.46
CSNK1E-206ENST00000413574 HADHAP40939 763 aa30.39■■■□□ 2.46
CSNK1E-206ENST00000413574 DRG2P55039 364 aaKnown RBP30.39■■■□□ 2.46
CSNK1E-206ENST00000413574 SKIDA1Q1XH10 827 aa30.39■■■□□ 2.46
CSNK1E-206ENST00000413574 BBS9Q3SYG4 887 aa30.39■■■□□ 2.46
CSNK1E-206ENST00000413574 HP1BP3Q5SSJ5 553 aaPredicted RBP30.39■■■□□ 2.46
CSNK1E-206ENST00000413574 ZDHHC24Q6UX98 284 aa30.39■■■□□ 2.46
CSNK1E-206ENST00000413574 FAM174AQ8TBP5 190 aa30.39■■■□□ 2.46
CSNK1E-206ENST00000413574 SEC14L1Q92503 715 aa30.39■■■□□ 2.46
CSNK1E-206ENST00000413574 ART4Q93070 314 aa30.39■■■□□ 2.46
CSNK1E-206ENST00000413574 SKA1Q96BD8 255 aa30.39■■■□□ 2.46
CSNK1E-206ENST00000413574 ARFGAP3Q9NP61 516 aa30.39■■■□□ 2.46
CSNK1E-206ENST00000413574 SOX13Q9UN79 622 aa30.39■■■□□ 2.46
CSNK1E-206ENST00000413574 MAD1L1Q9Y6D9 718 aa30.39■■■□□ 2.46
CSNK1E-206ENST00000413574 TDRD6O60522 2096 aaKnown RBP30.38■■■□□ 2.45
CSNK1E-206ENST00000413574 PRAMEF1O95521 474 aa30.38■■■□□ 2.45
CSNK1E-206ENST00000413574 RHOXF2BP0C7M4 288 aa30.38■■■□□ 2.45
CSNK1E-206ENST00000413574 THOP1P52888 689 aa30.38■■■□□ 2.45
CSNK1E-206ENST00000413574 LAMB3Q13751 1172 aa30.38■■■□□ 2.45
CSNK1E-206ENST00000413574 HIF1AQ16665 826 aa30.38■■■□□ 2.45
CSNK1E-206ENST00000413574 OR2I1PQ8NGU4 316 aa30.38■■■□□ 2.45
CSNK1E-206ENST00000413574 FBXO25Q8TCJ0 367 aa30.38■■■□□ 2.45
CSNK1E-206ENST00000413574 MFSD3Q96ES6 412 aa30.38■■■□□ 2.45
CSNK1E-206ENST00000413574 RHOXF2Q9BQY4 288 aa30.38■■■□□ 2.45
CSNK1E-206ENST00000413574 FAM96AQ9H5X1 160 aa30.38■■■□□ 2.45
CSNK1E-206ENST00000413574 TMEM202A6NGA9 273 aa30.37■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 159.2 ms