RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 PCYT1AP49585 367 aa4.45□□□□□ -1.7
CCDC54-201ENST00000261058 GALCP54803 685 aa4.45□□□□□ -1.7
CCDC54-201ENST00000261058 BRWD1-AS2P59051 145 aa4.45□□□□□ -1.7
CCDC54-201ENST00000261058 SEC61BP60468 96 aaKnown RBP4.45□□□□□ -1.7
CCDC54-201ENST00000261058 GRIK2Q13002 908 aa4.45□□□□□ -1.7
CCDC54-201ENST00000261058 CHAF1BQ13112 559 aa4.45□□□□□ -1.7
CCDC54-201ENST00000261058 NAB2Q15742 525 aa4.45□□□□□ -1.7
CCDC54-201ENST00000261058 DECR1Q16698 335 aa4.45□□□□□ -1.7
CCDC54-201ENST00000261058 KRT77Q7Z794 578 aa4.45□□□□□ -1.7
CCDC54-201ENST00000261058 BEST3Q8N1M1 668 aa4.45□□□□□ -1.7
CCDC54-201ENST00000261058 CCDC89Q8N998 374 aa4.45□□□□□ -1.7
CCDC54-201ENST00000261058 TTC14Q96N46 770 aa4.45□□□□□ -1.7
CCDC54-201ENST00000261058 NCAPGQ9BPX3 1015 aa4.45□□□□□ -1.7
CCDC54-201ENST00000261058 PLK3Q9H4B4 646 aa4.45□□□□□ -1.7
CCDC54-201ENST00000261058 SMARCAD1Q9H4L7 1026 aa4.45□□□□□ -1.7
CCDC54-201ENST00000261058 PCDH9Q9HC56 1237 aa4.45□□□□□ -1.7
CCDC54-201ENST00000261058 WSB2Q9NYS7 404 aaPredicted RBP4.45□□□□□ -1.7
CCDC54-201ENST00000261058 C1RLQ9NZP8 487 aa4.45□□□□□ -1.7
CCDC54-201ENST00000261058 TTC7AQ9ULT0 858 aaPredicted RBP4.45□□□□□ -1.7
CCDC54-201ENST00000261058 RPGRIP1LQ68CZ1 1315 aa4.44□□□□□ -1.7
CCDC54-201ENST00000261058 ATXN2Q99700 1313 aaKnown RBP4.44□□□□□ -1.7
CCDC54-201ENST00000261058 TAF1P21675 1872 aa4.44□□□□□ -1.7
CCDC54-201ENST00000261058 A0A1W2PQ09 198 aa4.44□□□□□ -1.7
CCDC54-201ENST00000261058 PAPSS1O43252 624 aaPredicted RBP4.44□□□□□ -1.7
CCDC54-201ENST00000261058 HS6ST1O60243 411 aa4.44□□□□□ -1.7
CCDC54-201ENST00000261058 KCNJ13O60928 360 aa4.44□□□□□ -1.7
CCDC54-201ENST00000261058 RFPL2O75678 378 aa4.44□□□□□ -1.7
CCDC54-201ENST00000261058 CLTBP09497 229 aa4.44□□□□□ -1.7
CCDC54-201ENST00000261058 ITGB8P26012 769 aa4.44□□□□□ -1.7
CCDC54-201ENST00000261058 PRCPP42785 496 aa4.44□□□□□ -1.7
CCDC54-201ENST00000261058 IKQ13123 557 aaPredicted RBP4.44□□□□□ -1.7
CCDC54-201ENST00000261058 DHX34Q14147 1143 aaKnown RBP4.44□□□□□ -1.7
CCDC54-201ENST00000261058 NFATC4Q14934 902 aa4.44□□□□□ -1.7
CCDC54-201ENST00000261058 OASLQ15646 514 aaKnown RBP4.44□□□□□ -1.7
CCDC54-201ENST00000261058 ZNF805Q5CZA5 627 aa4.44□□□□□ -1.7
CCDC54-201ENST00000261058 RILPL1Q5EBL4 403 aa4.44□□□□□ -1.7
CCDC54-201ENST00000261058 PAPPA-AS1Q5QFB9 102 aa4.44□□□□□ -1.7
CCDC54-201ENST00000261058 DSELQ8IZU8 1212 aa4.44□□□□□ -1.7
CCDC54-201ENST00000261058 IQCF1Q8N6M8 205 aa4.44□□□□□ -1.7
CCDC54-201ENST00000261058 ZNF114Q8NC26 417 aa4.44□□□□□ -1.7
CCDC54-201ENST00000261058 OR2AK2Q8NG84 335 aa4.44□□□□□ -1.7
CCDC54-201ENST00000261058 MAGEC3Q8TD91 643 aa4.44□□□□□ -1.7
CCDC54-201ENST00000261058 ELP5Q8TE02 316 aa4.44□□□□□ -1.7
CCDC54-201ENST00000261058 RND1Q92730 232 aa4.44□□□□□ -1.7
CCDC54-201ENST00000261058 LRRC59Q96AG4 307 aaKnown RBP4.44□□□□□ -1.7
CCDC54-201ENST00000261058 RHBDF1Q96CC6 855 aa4.44□□□□□ -1.7
CCDC54-201ENST00000261058 GRAMD2BQ96HH9 432 aa4.44□□□□□ -1.7
CCDC54-201ENST00000261058 FEM1CQ96JP0 617 aa4.44□□□□□ -1.7
CCDC54-201ENST00000261058 NUDT16L1Q9BRJ7 211 aaKnown RBP4.44□□□□□ -1.7
CCDC54-201ENST00000261058 C1QTNF1Q9BXJ1 281 aa4.44□□□□□ -1.7
CCDC54-201ENST00000261058 IL25Q9H293 177 aa4.44□□□□□ -1.7
CCDC54-201ENST00000261058 WNT16Q9UBV4 365 aa4.44□□□□□ -1.7
CCDC54-201ENST00000261058 SEC63Q9UGP8 760 aaKnown RBP4.44□□□□□ -1.7
CCDC54-201ENST00000261058 EXO1Q9UQ84 846 aaKnown RBP4.44□□□□□ -1.7
CCDC54-201ENST00000261058 TNFRSF18Q9Y5U5 241 aa4.44□□□□□ -1.7
CCDC54-201ENST00000261058 TRIP12Q14669 1992 aaPredicted RBP4.44□□□□□ -1.7
CCDC54-201ENST00000261058 KANSL1LA0AUZ9 987 aa4.43□□□□□ -1.7
CCDC54-201ENST00000261058 LINC01553A4QN01 128 aa4.43□□□□□ -1.7
CCDC54-201ENST00000261058 SRRM3A6NNA2 597 aaPredicted RBP4.43□□□□□ -1.7
CCDC54-201ENST00000261058 M0QZ24 198 aa4.43□□□□□ -1.7
CCDC54-201ENST00000261058 SOCS6O14544 535 aa4.43□□□□□ -1.7
CCDC54-201ENST00000261058 TPPPO94811 219 aa4.43□□□□□ -1.7
CCDC54-201ENST00000261058 ICAM1P05362 532 aa4.43□□□□□ -1.7
CCDC54-201ENST00000261058 TUBBP07437 444 aa4.43□□□□□ -1.7
CCDC54-201ENST00000261058 SRCP12931 536 aa4.43□□□□□ -1.7
CCDC54-201ENST00000261058 RRM1P23921 792 aa4.43□□□□□ -1.7
CCDC54-201ENST00000261058 ACTN2P35609 894 aa4.43□□□□□ -1.7
CCDC54-201ENST00000261058 APOBEC1P41238 236 aaKnown RBP4.43□□□□□ -1.7
CCDC54-201ENST00000261058 KCNJ4P48050 445 aa4.43□□□□□ -1.7
CCDC54-201ENST00000261058 FOXG1P55316 489 aaPredicted RBP4.43□□□□□ -1.7
CCDC54-201ENST00000261058 CSNK2A1P68400 391 aaPredicted RBP4.43□□□□□ -1.7
CCDC54-201ENST00000261058 SPOCK1Q08629 439 aa4.43□□□□□ -1.7
CCDC54-201ENST00000261058 SREBF2Q12772 1141 aa4.43□□□□□ -1.7
CCDC54-201ENST00000261058 PNLIPRP3Q17RR3 467 aa4.43□□□□□ -1.7
CCDC54-201ENST00000261058 ATP13A5Q4VNC0 1218 aa4.43□□□□□ -1.7
CCDC54-201ENST00000261058 KCTD18Q6PI47 426 aaPredicted RBP4.43□□□□□ -1.7
CCDC54-201ENST00000261058 FBXL14Q8N1E6 418 aa4.43□□□□□ -1.7
CCDC54-201ENST00000261058 PGBD5Q8N414 524 aa4.43□□□□□ -1.7
CCDC54-201ENST00000261058 PCDH20Q8N6Y1 951 aaKnown RBP4.43□□□□□ -1.7
CCDC54-201ENST00000261058 CSNK2A3Q8NEV1 391 aa4.43□□□□□ -1.7
CCDC54-201ENST00000261058 SPATA22Q8NHS9 363 aa4.43□□□□□ -1.7
CCDC54-201ENST00000261058 TAAR8Q969N4 342 aa4.43□□□□□ -1.7
CCDC54-201ENST00000261058 ZBTB9Q96C00 473 aa4.43□□□□□ -1.7
CCDC54-201ENST00000261058 SERINC2Q96SA4 455 aa4.43□□□□□ -1.7
CCDC54-201ENST00000261058 SRSF8Q9BRL6 282 aaKnown RBP4.43□□□□□ -1.7
CCDC54-201ENST00000261058 SEBOXQ9HB31 216 aaPredicted RBP4.43□□□□□ -1.7
CCDC54-201ENST00000261058 NOX4Q9NPH5 578 aa4.43□□□□□ -1.7
CCDC54-201ENST00000261058 MCM9Q9NXL9 1143 aa4.43□□□□□ -1.7
CCDC54-201ENST00000261058 COPG2Q9UBF2 871 aa4.43□□□□□ -1.7
CCDC54-201ENST00000261058 OR14J1Q9UGF5 321 aa4.43□□□□□ -1.7
CCDC54-201ENST00000261058 POLG2Q9UHN1 485 aa4.43□□□□□ -1.7
CCDC54-201ENST00000261058 NENFQ9UMX5 172 aa4.43□□□□□ -1.7
CCDC54-201ENST00000261058 CMAHPQ9Y471 501 aa4.43□□□□□ -1.7
CCDC54-201ENST00000261058 TMEM184BQ9Y519 407 aaPredicted RBP4.43□□□□□ -1.7
CCDC54-201ENST00000261058 SNX8Q9Y5X2 465 aa4.43□□□□□ -1.7
CCDC54-201ENST00000261058 ZNF644Q9H582 1327 aaPredicted RBP4.43□□□□□ -1.7
CCDC54-201ENST00000261058 hDV102S1A0JD36 115 aa4.42□□□□□ -1.7
CCDC54-201ENST00000261058 OR2A25A4D2G3 310 aa4.42□□□□□ -1.7
CCDC54-201ENST00000261058 PROB1E7EW31 1015 aa4.42□□□□□ -1.7
CCDC54-201ENST00000261058 MAP2K7O14733 419 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms