RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 ROR2Q01974 943 aaKnown RBP3.78□□□□□ -1.8
HDAC2-208ENST00000520746 FAM27E3Q08E93 113 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 GPS2Q13227 327 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 MYBPC2Q14324 1141 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 ARHGEF6Q15052 776 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 HSPB2Q16082 182 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 TSTQ16762 297 aaKnown RBP3.78□□□□□ -1.8
HDAC2-208ENST00000520746 ZNF284Q2VY69 593 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 FSCBQ5H9T9 825 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 DNTTIP2Q5QJE6 756 aaKnown RBP3.78□□□□□ -1.8
HDAC2-208ENST00000520746 FAAH2Q6GMR7 532 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 INO80CQ6PI98 192 aaPredicted RBP3.78□□□□□ -1.8
HDAC2-208ENST00000520746 MAATS1Q7Z4T9 603 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 PATL1Q86TB9 770 aaKnown RBP3.78□□□□□ -1.8
HDAC2-208ENST00000520746 MB21D2Q8IYB1 491 aaPredicted RBP3.78□□□□□ -1.8
HDAC2-208ENST00000520746 CNTROBQ8N137 903 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 GJC3Q8NFK1 279 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 LMO3Q8TAP4 145 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 TMEM163Q8TC26 289 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 KCNG4Q8TDN1 519 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 MSTO1Q9BUK6 570 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 HIF1ANQ9NWT6 349 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 WNT16Q9UBV4 365 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 FAM96BQ9Y3D0 163 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 RAI2Q9Y5P3 530 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 PTGDR2Q9Y5Y4 395 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 COL5A2P05997 1499 aaPredicted RBP3.78□□□□□ -1.8
HDAC2-208ENST00000520746 IFT172Q9UG01 1749 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 THSD7AQ9UPZ6 1657 aa3.78□□□□□ -1.81
HDAC2-208ENST00000520746 KTN1Q86UP2 1357 aaKnown RBP3.77□□□□□ -1.81
HDAC2-208ENST00000520746 DLC1Q96QB1 1528 aa3.77□□□□□ -1.81
HDAC2-208ENST00000520746 OR6C75A6NL08 312 aa3.77□□□□□ -1.81
HDAC2-208ENST00000520746 B4E171 279 aa3.77□□□□□ -1.81
HDAC2-208ENST00000520746 INAFM1C9JVW0 142 aa3.77□□□□□ -1.81
HDAC2-208ENST00000520746 IFNL4K9M1U5 179 aa3.77□□□□□ -1.81
HDAC2-208ENST00000520746 SNAP23O00161 211 aa3.77□□□□□ -1.81
HDAC2-208ENST00000520746 VWA5AO00534 786 aa3.77□□□□□ -1.81
HDAC2-208ENST00000520746 MTA2O94776 668 aa3.77□□□□□ -1.81
HDAC2-208ENST00000520746 IRF1P10914 325 aa3.77□□□□□ -1.81
HDAC2-208ENST00000520746 NAGAP17050 411 aa3.77□□□□□ -1.81
HDAC2-208ENST00000520746 TSPAN7P41732 249 aa3.77□□□□□ -1.81
HDAC2-208ENST00000520746 GNAQP50148 359 aa3.77□□□□□ -1.81
HDAC2-208ENST00000520746 CCR9P51686 369 aa3.77□□□□□ -1.81
HDAC2-208ENST00000520746 ITGADQ13349 1161 aa3.77□□□□□ -1.81
HDAC2-208ENST00000520746 RNPS1Q15287 305 aaKnown RBP3.77□□□□□ -1.81
HDAC2-208ENST00000520746 HIST2H2ACQ16777 129 aaPredicted RBP3.77□□□□□ -1.81
HDAC2-208ENST00000520746 SOWAHAQ2M3V2 549 aa3.77□□□□□ -1.81
HDAC2-208ENST00000520746 ESCO2Q56NI9 601 aa3.77□□□□□ -1.81
HDAC2-208ENST00000520746 DCAF6Q58WW2 860 aa3.77□□□□□ -1.81
HDAC2-208ENST00000520746 RSRC2Q7L4I2 434 aaKnown RBP3.77□□□□□ -1.81
HDAC2-208ENST00000520746 SLC46A3Q7Z3Q1 461 aa3.77□□□□□ -1.81
HDAC2-208ENST00000520746 TDRPQ86YL5 185 aa3.77□□□□□ -1.81
HDAC2-208ENST00000520746 DHX40Q8IX18 779 aaKnown RBP3.77□□□□□ -1.81
HDAC2-208ENST00000520746 ZCCHC9Q8N567 271 aaKnown RBP3.77□□□□□ -1.81
HDAC2-208ENST00000520746 PARP16Q8N5Y8 322 aa3.77□□□□□ -1.81
HDAC2-208ENST00000520746 CADM4Q8NFZ8 388 aa3.77□□□□□ -1.81
HDAC2-208ENST00000520746 METTL6Q8TCB7 284 aa3.77□□□□□ -1.81
HDAC2-208ENST00000520746 UCMAQ8WVF2 138 aa3.77□□□□□ -1.81
HDAC2-208ENST00000520746 OTULINQ96BN8 352 aa3.77□□□□□ -1.81
HDAC2-208ENST00000520746 NR1H4Q96RI1 486 aaPredicted RBP3.77□□□□□ -1.81
HDAC2-208ENST00000520746 MXRA8Q9BRK3 442 aa3.77□□□□□ -1.81
HDAC2-208ENST00000520746 H2AFJQ9BTM1 129 aa3.77□□□□□ -1.81
HDAC2-208ENST00000520746 DCLK3Q9C098 648 aa3.77□□□□□ -1.81
HDAC2-208ENST00000520746 ZHX3Q9H4I2 956 aa3.77□□□□□ -1.81
HDAC2-208ENST00000520746 TERF2IPQ9NYB0 399 aa3.77□□□□□ -1.81
HDAC2-208ENST00000520746 IL36RNQ9UBH0 155 aa3.77□□□□□ -1.81
HDAC2-208ENST00000520746 AASSQ9UDR5 926 aa3.77□□□□□ -1.81
HDAC2-208ENST00000520746 FZD10Q9ULW2 581 aa3.77□□□□□ -1.81
HDAC2-208ENST00000520746 ICAM5Q9UMF0 924 aa3.77□□□□□ -1.81
HDAC2-208ENST00000520746 A4GNTQ9UNA3 340 aa3.77□□□□□ -1.81
HDAC2-208ENST00000520746 A3GALT2U3KPV4 340 aa3.77□□□□□ -1.81
HDAC2-208ENST00000520746 NRAPQ86VF7 1730 aa3.77□□□□□ -1.81
HDAC2-208ENST00000520746 ATP10DQ9P241 1426 aa3.77□□□□□ -1.81
HDAC2-208ENST00000520746 USP47Q96K76 1375 aa3.76□□□□□ -1.81
HDAC2-208ENST00000520746 RAB3GAP2Q9H2M9 1393 aa3.76□□□□□ -1.81
HDAC2-208ENST00000520746 TTC21AQ8NDW8 1320 aa3.76□□□□□ -1.81
HDAC2-208ENST00000520746 KDM3AQ9Y4C1 1321 aa3.76□□□□□ -1.81
HDAC2-208ENST00000520746 TNS1Q9HBL0 1735 aaKnown RBP3.76□□□□□ -1.81
HDAC2-208ENST00000520746 A0A1W2PQM1 296 aa3.76□□□□□ -1.81
HDAC2-208ENST00000520746 TTC36A6NLP5 189 aa3.76□□□□□ -1.81
HDAC2-208ENST00000520746 LRRC53A6NM62 1247 aa3.76□□□□□ -1.81
HDAC2-208ENST00000520746 NPIPB11E5RHQ5 1161 aa3.76□□□□□ -1.81
HDAC2-208ENST00000520746 BCAT2O15382 392 aaPredicted RBP3.76□□□□□ -1.81
HDAC2-208ENST00000520746 ASAP2O43150 1006 aa3.76□□□□□ -1.81
HDAC2-208ENST00000520746 SEC31AO94979 1220 aaKnown RBP3.76□□□□□ -1.81
HDAC2-208ENST00000520746 TFP02787 698 aa3.76□□□□□ -1.81
HDAC2-208ENST00000520746 SPARCP09486 303 aa3.76□□□□□ -1.81
HDAC2-208ENST00000520746 MYF6P23409 242 aa3.76□□□□□ -1.81
HDAC2-208ENST00000520746 HOXD3P31249 432 aaPredicted RBP3.76□□□□□ -1.81
HDAC2-208ENST00000520746 CPOXP36551 454 aa3.76□□□□□ -1.81
HDAC2-208ENST00000520746 EIF3BP55884 814 aaKnown RBP3.76□□□□□ -1.81
HDAC2-208ENST00000520746 FOXD4Q12950 439 aaPredicted RBP3.76□□□□□ -1.81
HDAC2-208ENST00000520746 GRIK3Q13003 919 aa3.76□□□□□ -1.81
HDAC2-208ENST00000520746 DCTN2Q13561 401 aaKnown RBP3.76□□□□□ -1.81
HDAC2-208ENST00000520746 HNF4GQ14541 408 aa3.76□□□□□ -1.81
HDAC2-208ENST00000520746 GSTA3Q16772 222 aa3.76□□□□□ -1.81
HDAC2-208ENST00000520746 TXNDC8Q6A555 127 aa3.76□□□□□ -1.81
HDAC2-208ENST00000520746 CPLX4Q7Z7G2 160 aa3.76□□□□□ -1.81
HDAC2-208ENST00000520746 NOXA1Q86UR1 476 aa3.76□□□□□ -1.81
HDAC2-208ENST00000520746 SFTPA2Q8IWL1 248 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms