RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 ENTPD7Q9NQZ7 604 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 MTMR4Q9NYA4 1195 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 IL1RAPL1Q9NZN1 696 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 KLQ9UEF7 1012 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 CNOT11Q9UKZ1 510 aaKnown RBP4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 FZD4Q9ULV1 537 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 KCNE2Q9Y6J6 123 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 PIAS3Q9Y6X2 628 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 SIPA1L1O43166 1804 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 RAD50Q92878 1312 aa4.92□□□□□ -1.62
HMGB1P23-201ENST00000518743 GOLGA4Q13439 2230 aaKnown RBP4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 ASCC3Q8N3C0 2202 aaKnown RBP4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 TEX13CA0A0J9YWL9 993 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 KANSL1LA0AUZ9 987 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 WDR27A2RRH5 827 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 NPIPB13A6NJU9 1138 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 NPIPB5A8MRT5 1133 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 NPIPB4C9JG80 1138 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 AP4M1O00189 453 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 SYN3O14994 580 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 KIF1CO43896 1103 aaKnown RBP4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 SPDEFO95238 335 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 TTLL1O95922 423 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 ZNF806P0C7X5 589 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 NR2F1P10589 423 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 IRF1P10914 325 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 PKMP14618 531 aaKnown RBP4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 CPOXP36551 454 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 PPARGP37231 505 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 MAGEA9P43362 315 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 GABRB2P47870 512 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 CPA2P48052 419 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 LMAN1P49257 510 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 DIO1P49895 249 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 SNX16P57768 344 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 NLRP5P59047 1200 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 GPC5P78333 572 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 SIM1P81133 766 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 EFNB1P98172 346 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 STK4Q13043 487 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 SRSF5Q13243 272 aaKnown RBP4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 KRTAP21-3Q3LHN1 58 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 CDC73Q6P1J9 531 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 FAM83HQ6ZRV2 1179 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 LIMS2Q7Z4I7 341 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 FBXO16Q8IX29 292 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 LRRC56Q8IYG6 542 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 CHCHD4Q8N4Q1 142 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 NKAIN3Q8N8D7 197 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 PI4KAP1Q8N8J0 262 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 SYT8Q8NBV8 401 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 OR6J1Q8NGC5 347 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 CLEC4CQ8WTT0 213 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 NELL1Q92832 810 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 HS6ST2Q96MM7 605 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 CDK5RAP1Q96SZ6 601 aaKnown RBP4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 MAP7D2Q96T17 732 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 NCAPGQ9BPX3 1015 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 ELOVL1Q9BW60 279 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 PUS3Q9BZE2 481 aaKnown RBP4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 CTDSP1Q9GZU7 261 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 SLC32A1Q9H598 525 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 NFKBIL1Q9UBC1 381 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 DKK2Q9UBU2 259 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 IL17BQ9UHF5 180 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 RPS6KA6Q9UK32 745 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 ZNF215Q9UL58 517 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 SIRT4Q9Y6E7 314 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 LAMA1P25391 3075 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 PCNX2A6NKB5 2137 aa4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 UTP20O75691 2785 aaKnown RBP4.91□□□□□ -1.62
HMGB1P23-201ENST00000518743 MTORP42345 2549 aa4.9□□□□□ -1.62
HMGB1P23-201ENST00000518743 C17orf113A0A1B0GUU1 675 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 SPAARA0A1B0GVQ0 90 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 LIPT2A6NK58 231 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 B8ZZF3 427 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 MPHOSPH10O00566 681 aaKnown RBP4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 HNRNPCL1O60812 293 aaKnown RBP4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 USP12O75317 370 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 EIF2S1P05198 315 aaKnown RBP4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 RHOP08100 348 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 HOXB7P09629 217 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 VDRP11473 427 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 ARSAP15289 507 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 TGM2P21980 687 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 PRPH2P23942 346 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 ACTN2P35609 894 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 THPOP40225 353 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 BLKP51451 505 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 RAE1P78406 368 aaKnown RBP4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 FAM189BP81408 668 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 DEUP1Q05D60 604 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 FZD5Q13467 585 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 DPCR1Q3MIW9 517 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 AARS2Q5JTZ9 985 aaKnown RBP4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 LRCH2Q5VUJ6 765 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 TCEAL6Q6IPX3 200 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 NAA16Q6N069 864 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 TMEM81Q6P7N7 255 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 VSTM1Q6UX27 236 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms