RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 DNTTIP2Q5QJE6 756 aaKnown RBP2.31□□□□□ -2.04
ITGB1-213ENST00000484088 C9orf47Q6ZRZ4 202 aa2.31□□□□□ -2.04
ITGB1-213ENST00000484088 DENND5BQ6ZUT9 1274 aa2.31□□□□□ -2.04
ITGB1-213ENST00000484088 SHFQ7M4L6 423 aa2.31□□□□□ -2.04
ITGB1-213ENST00000484088 AACSQ86V21 672 aa2.31□□□□□ -2.04
ITGB1-213ENST00000484088 RPAP2Q8IXW5 612 aaPredicted RBP2.31□□□□□ -2.04
ITGB1-213ENST00000484088 RNF168Q8IYW5 571 aaPredicted RBP2.31□□□□□ -2.04
ITGB1-213ENST00000484088 CLIP4Q8N3C7 705 aa2.31□□□□□ -2.04
ITGB1-213ENST00000484088 SRBD1Q8N5C6 995 aaKnown RBP2.31□□□□□ -2.04
ITGB1-213ENST00000484088 LSMEM1Q8N8F7 131 aa2.31□□□□□ -2.04
ITGB1-213ENST00000484088 MIGA1Q8NAN2 632 aa2.31□□□□□ -2.04
ITGB1-213ENST00000484088 SCCPDHQ8NBX0 429 aa2.31□□□□□ -2.04
ITGB1-213ENST00000484088 ZNF114Q8NC26 417 aa2.31□□□□□ -2.04
ITGB1-213ENST00000484088 OIT3Q8WWZ8 545 aa2.31□□□□□ -2.04
ITGB1-213ENST00000484088 SMARCE1Q969G3 411 aa2.31□□□□□ -2.04
ITGB1-213ENST00000484088 LRRC59Q96AG4 307 aaKnown RBP2.31□□□□□ -2.04
ITGB1-213ENST00000484088 MIB2Q96AX9 1013 aa2.31□□□□□ -2.04
ITGB1-213ENST00000484088 SLC22A18Q96BI1 424 aa2.31□□□□□ -2.04
ITGB1-213ENST00000484088 TMEM68Q96MH6 324 aa2.31□□□□□ -2.04
ITGB1-213ENST00000484088 GFM1Q96RP9 751 aaKnown RBP2.31□□□□□ -2.04
ITGB1-213ENST00000484088 FIZ1Q96SL8 496 aa2.31□□□□□ -2.04
ITGB1-213ENST00000484088 PCYT2Q99447 389 aa2.31□□□□□ -2.04
ITGB1-213ENST00000484088 MXD3Q9BW11 206 aa2.31□□□□□ -2.04
ITGB1-213ENST00000484088 DCLK3Q9C098 648 aa2.31□□□□□ -2.04
ITGB1-213ENST00000484088 FTOQ9C0B1 505 aaKnown RBP eCLIP2.31□□□□□ -2.04
ITGB1-213ENST00000484088 RAB6CQ9H0N0 254 aa2.31□□□□□ -2.04
ITGB1-213ENST00000484088 CCDC68Q9H2F9 335 aa2.31□□□□□ -2.04
ITGB1-213ENST00000484088 PPIL3Q9H2H8 161 aaKnown RBP2.31□□□□□ -2.04
ITGB1-213ENST00000484088 PIGMQ9H3S5 423 aa2.31□□□□□ -2.04
ITGB1-213ENST00000484088 PLK3Q9H4B4 646 aa2.31□□□□□ -2.04
ITGB1-213ENST00000484088 SYNCQ9H7C4 482 aa2.31□□□□□ -2.04
ITGB1-213ENST00000484088 KAT14Q9H8E8 782 aa2.31□□□□□ -2.04
ITGB1-213ENST00000484088 ACSS1Q9NUB1 689 aaPredicted RBP2.31□□□□□ -2.04
ITGB1-213ENST00000484088 IL36RNQ9UBH0 155 aa2.31□□□□□ -2.04
ITGB1-213ENST00000484088 ZNF215Q9UL58 517 aaPredicted RBP2.31□□□□□ -2.04
ITGB1-213ENST00000484088 PCDHA7Q9UN72 937 aa2.31□□□□□ -2.04
ITGB1-213ENST00000484088 CDC14AQ9UNH5 594 aa2.31□□□□□ -2.04
ITGB1-213ENST00000484088 LAS1LQ9Y4W2 734 aaKnown RBP2.31□□□□□ -2.04
ITGB1-213ENST00000484088 TCF20Q9UGU0 1960 aaKnown RBP2.3□□□□□ -2.04
ITGB1-213ENST00000484088 A0A0U1RQJ8 604 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 A0A1W2PP11 408 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 CD8B2A6NJW9 211 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 HMGB1P1B2RPK0 211 aaPredicted RBP2.3□□□□□ -2.04
ITGB1-213ENST00000484088 VWA5AO00534 786 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 ITM2AO43736 263 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 NDUFS3O75489 264 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 DAB1O75553 588 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 JRKO75564 520 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 SLC25A12O75746 678 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 WISP2O76076 250 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 PPP1R3DO95685 299 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 BMP15O95972 392 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 RB1P06400 928 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 KRT10P13645 584 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 AKR1B1P15121 316 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 TRIM21P19474 475 aaKnown RBP2.3□□□□□ -2.04
ITGB1-213ENST00000484088 HOXC9P31274 260 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 PPARGP37231 505 aaPredicted RBP2.3□□□□□ -2.04
ITGB1-213ENST00000484088 THBS3P49746 956 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 MMP14P50281 582 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 PDLIM4P50479 330 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 HSD17B4P51659 736 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 CLNS1AP54105 237 aaKnown RBP2.3□□□□□ -2.04
ITGB1-213ENST00000484088 RAD23BP54727 409 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 GALCP54803 685 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 HNRNPH2P55795 449 aaKnown RBP2.3□□□□□ -2.04
ITGB1-213ENST00000484088 MRPS34P82930 218 aaKnown RBP2.3□□□□□ -2.04
ITGB1-213ENST00000484088 CXCL9Q07325 125 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 CRYZQ08257 329 aaKnown RBP2.3□□□□□ -2.04
ITGB1-213ENST00000484088 DHX34Q14147 1143 aaKnown RBP2.3□□□□□ -2.04
ITGB1-213ENST00000484088 CRYMQ14894 314 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 WTAPQ15007 396 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 DECR1Q16698 335 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 MYLK3Q32MK0 819 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 FSCBQ5H9T9 825 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 RARS2Q5T160 578 aaKnown RBP2.3□□□□□ -2.04
ITGB1-213ENST00000484088 NSUN5P2Q63ZY6 315 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 RUSC1-AS1Q66K80 236 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 ZDHHC17Q8IUH5 632 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 PGBD5Q8N414 524 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 HMCESQ96FZ2 354 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 LRFN5Q96NI6 719 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 GFI1Q99684 422 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 SLC25A33Q9BSK2 321 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 IFIH1Q9BYX4 1025 aaKnown RBP2.3□□□□□ -2.04
ITGB1-213ENST00000484088 GAREM1Q9H706 876 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 PDE7BQ9NP56 450 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 GPR108Q9NPR9 543 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 RRP7BPQ9NSQ0 103 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 OGFRQ9NZT2 677 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 COPG2Q9UBF2 871 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 NENFQ9UMX5 172 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 ERVK-11Q9UQG0 969 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 TMEM184BQ9Y519 407 aaPredicted RBP2.3□□□□□ -2.04
ITGB1-213ENST00000484088 SESN1Q9Y6P5 492 aa2.3□□□□□ -2.04
ITGB1-213ENST00000484088 TRIP12Q14669 1992 aaPredicted RBP2.3□□□□□ -2.04
ITGB1-213ENST00000484088 LOC102723996A0A087X1L8 192 aa2.29□□□□□ -2.04
ITGB1-213ENST00000484088 LNP1A1A4G5 178 aa2.29□□□□□ -2.04
ITGB1-213ENST00000484088 OR6C75A6NL08 312 aa2.29□□□□□ -2.04
ITGB1-213ENST00000484088 TTC36A6NLP5 189 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms