RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 PDZD8Q8NEN9 1154 aa15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 ADAMTS19Q8TE59 1207 aa15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 PDCD6IPQ8WUM4 868 aaKnown RBP15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 SCG3Q8WXD2 468 aaKnown RBP15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 CNDP1Q96KN2 507 aa15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 BPIFA1Q9NP55 256 aa15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 FAM50BQ9Y247 325 aa15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 PTGDR2Q9Y5Y4 395 aa15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 PDE4DIPQ5VU43 2346 aa15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 A0A1B0GVM2 712 aa15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 UBA6A0AVT1 1052 aaPredicted RBP15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 TCAF2A6NFQ2 919 aa15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 PFDN1O60925 122 aa15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 C1RP00736 705 aa15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 EPOP01588 193 aa15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 SOD2P04179 222 aa15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 MSX2P35548 267 aaPredicted RBP15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 DPP6P42658 865 aa15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 KPNA2P52292 529 aaKnown RBP15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 ZNF177Q13360 481 aaPredicted RBP15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 FAM45BPQ6NSW5 357 aa15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 KLC3Q6P597 504 aa15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 KLHDC10Q6PID8 442 aa15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 PIANPQ8IYJ0 282 aa15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 EFHBQ8N7U6 833 aa15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 PHC3Q8NDX5 983 aa15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 FAM45AQ8TCE6 357 aa15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 CCDC97Q96F63 343 aaPredicted RBP15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 MAELQ96JY0 434 aaKnown RBP15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 MYRFLQ96LU7 910 aa15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 CDK5RAP1Q96SZ6 601 aaKnown RBP15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 SLC30A3Q99726 388 aa15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 TMEM165Q9HC07 324 aa15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 SCUBE2Q9NQ36 999 aa15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 OGDHLQ9ULD0 1010 aa15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 ARHGAP26Q9UNA1 814 aa15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 POMPQ9Y244 141 aa15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 ILVBLA1L0T0 632 aa15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 STX16-NPEPL1H3BU86 382 aa15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 UBXN8O00124 270 aa15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 PRAMEF12O95522 483 aa15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 ASPHQ12797 758 aa15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 ATXN7L2Q5T6C5 722 aaPredicted RBP15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 PSAPL1Q6NUJ1 521 aa15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 SLC39A5Q6ZMH5 540 aa15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 GK5Q6ZS86 529 aa15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 CARNMT1Q8N4J0 409 aa15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 PPFIBP2Q8ND30 876 aa15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 PPP1R14BQ96C90 147 aa15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 NSUN5Q96P11 429 aaKnown RBP15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 RTKNQ9BST9 563 aa15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 VTI1BQ9UEU0 232 aa15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 TBC1D30Q9Y2I9 924 aa15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 FCF1Q9Y324 198 aaKnown RBP15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 RAI2Q9Y5P3 530 aa15.16■□□□□ 0.02
SCAMP4-202ENST00000409472 A0A1B0GTL3 188 aa15.15■□□□□ 0.02
SCAMP4-202ENST00000409472 ATP6AP2A0A1C7CYW4 349 aa15.15■□□□□ 0.02
SCAMP4-202ENST00000409472 OR1I1O60431 355 aa15.15■□□□□ 0.02
SCAMP4-202ENST00000409472 ATP6AP2O75787 350 aa15.15■□□□□ 0.02
SCAMP4-202ENST00000409472 MBL2P11226 248 aaPredicted RBP15.15■□□□□ 0.02
SCAMP4-202ENST00000409472 CCL5P13501 91 aa15.15■□□□□ 0.02
SCAMP4-202ENST00000409472 PRDX6P30041 224 aa15.15■□□□□ 0.02
SCAMP4-202ENST00000409472 FMO4P31512 558 aa15.15■□□□□ 0.02
SCAMP4-202ENST00000409472 TYSND1Q2T9J0 566 aa15.15■□□□□ 0.02
SCAMP4-202ENST00000409472 CNPY1Q3B7I2 92 aa15.15■□□□□ 0.02
SCAMP4-202ENST00000409472 TXNDC8Q6A555 127 aa15.15■□□□□ 0.02
SCAMP4-202ENST00000409472 MRNIPQ6NTE8 343 aa15.15■□□□□ 0.02
SCAMP4-202ENST00000409472 ANKRD33Q7Z3H0 272 aa15.15■□□□□ 0.02
SCAMP4-202ENST00000409472 SLC39A11Q8N1S5 342 aa15.15■□□□□ 0.02
SCAMP4-202ENST00000409472 RNF148Q8N7C7 305 aa15.15■□□□□ 0.02
SCAMP4-202ENST00000409472 GPR150Q8NGU9 434 aa15.15■□□□□ 0.02
SCAMP4-202ENST00000409472 OR6K2Q8NGY2 324 aa15.15■□□□□ 0.02
SCAMP4-202ENST00000409472 OVCA2Q8WZ82 227 aa15.15■□□□□ 0.02
SCAMP4-202ENST00000409472 LPGAT1Q92604 370 aa15.15■□□□□ 0.02
SCAMP4-202ENST00000409472 DOCK6Q96HP0 2047 aa15.15■□□□□ 0.02
SCAMP4-202ENST00000409472 CENPKQ9BS16 269 aa15.15■□□□□ 0.02
SCAMP4-202ENST00000409472 OCEL1Q9H607 264 aa15.15■□□□□ 0.02
SCAMP4-202ENST00000409472 NLE1Q9NVX2 485 aaPredicted RBP15.15■□□□□ 0.02
SCAMP4-202ENST00000409472 FKBPLQ9UIM3 349 aa15.15■□□□□ 0.02
SCAMP4-202ENST00000409472 K7ERQ8 282 aa15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 PRRG1O14668 218 aa15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 GREM1O60565 184 aa15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 TBL1XO60907 577 aa15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 SUPT7LO94864 414 aa15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 BAG2O95816 211 aa15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 RBP1P09455 135 aa15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 MTHFD2P13995 350 aa15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 ITGB8P26012 769 aa15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 ALDH1A3P47895 512 aa15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 APLP1P51693 650 aa15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 SMAD3P84022 425 aaKnown RBP15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 TAF12Q16514 161 aa15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 UNC50Q53HI1 259 aa15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 ZNF678Q5SXM1 525 aa15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 DNAJB7Q7Z6W7 309 aaPredicted RBP15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 PELI3Q8N2H9 469 aa15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 CPSF7Q8N684 471 aaKnown RBP15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 PTGR2Q8N8N7 351 aaPredicted RBP15.14■□□□□ 0.01
SCAMP4-202ENST00000409472 ARL14EPQ8N8R7 260 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms