RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 COQ10AQ96MF6 247 aa11.47□□□□□ -0.57
RAB5C-203ENST00000546881 PSKH2Q96QS6 385 aa11.47□□□□□ -0.57
RAB5C-203ENST00000546881 NUDT22Q9BRQ3 303 aa11.47□□□□□ -0.57
RAB5C-203ENST00000546881 ZWILCHQ9H900 591 aa11.47□□□□□ -0.57
RAB5C-203ENST00000546881 CWC15Q9P013 229 aaKnown RBP11.47□□□□□ -0.57
RAB5C-203ENST00000546881 IFNKQ9P0W0 207 aa11.47□□□□□ -0.57
RAB5C-203ENST00000546881 MYO1AQ9UBC5 1043 aa11.47□□□□□ -0.57
RAB5C-203ENST00000546881 CNOT8Q9UFF9 292 aaKnown RBP11.47□□□□□ -0.57
RAB5C-203ENST00000546881 SUFUQ9UMX1 484 aa11.47□□□□□ -0.57
RAB5C-203ENST00000546881 PIEZO2Q9H5I5 2752 aa11.46□□□□□ -0.57
RAB5C-203ENST00000546881 A0A1W2PQC6 194 aa11.46□□□□□ -0.57
RAB5C-203ENST00000546881 TMEM191CA6NGB0 347 aa11.46□□□□□ -0.57
RAB5C-203ENST00000546881 H3BRJ5 948 aa11.46□□□□□ -0.57
RAB5C-203ENST00000546881 HEXIM1O94992 359 aaKnown RBP11.46□□□□□ -0.57
RAB5C-203ENST00000546881 CEACAM5P06731 702 aa11.46□□□□□ -0.57
RAB5C-203ENST00000546881 CYP2A6P11509 494 aaPredicted RBP11.46□□□□□ -0.57
RAB5C-203ENST00000546881 CTPS1P17812 591 aa11.46□□□□□ -0.57
RAB5C-203ENST00000546881 WT1P19544 449 aaPredicted RBP11.46□□□□□ -0.57
RAB5C-203ENST00000546881 MPSTP25325 297 aa11.46□□□□□ -0.57
RAB5C-203ENST00000546881 NFKBIAP25963 317 aa11.46□□□□□ -0.57
RAB5C-203ENST00000546881 ARL4AP40617 200 aa11.46□□□□□ -0.57
RAB5C-203ENST00000546881 POLD2P49005 469 aa11.46□□□□□ -0.57
RAB5C-203ENST00000546881 MAXP61244 160 aa11.46□□□□□ -0.57
RAB5C-203ENST00000546881 PTPRRQ15256 657 aa11.46□□□□□ -0.57
RAB5C-203ENST00000546881 ASIC2Q16515 512 aa11.46□□□□□ -0.57
RAB5C-203ENST00000546881 TBR1Q16650 682 aa11.46□□□□□ -0.57
RAB5C-203ENST00000546881 SMTNL2Q2TAL5 461 aa11.46□□□□□ -0.57
RAB5C-203ENST00000546881 NKAIN2Q5VXU1 208 aa11.46□□□□□ -0.57
RAB5C-203ENST00000546881 PLEKHA7Q6IQ23 1121 aa11.46□□□□□ -0.57
RAB5C-203ENST00000546881 HSD11B1LQ7Z5J1 315 aa11.46□□□□□ -0.57
RAB5C-203ENST00000546881 IRF2BP2Q7Z5L9 587 aa11.46□□□□□ -0.57
RAB5C-203ENST00000546881 BBS5Q8N3I7 341 aa11.46□□□□□ -0.57
RAB5C-203ENST00000546881 NSMCE1Q8WV22 266 aa11.46□□□□□ -0.57
RAB5C-203ENST00000546881 PTCD2Q8WV60 388 aaKnown RBP11.46□□□□□ -0.57
RAB5C-203ENST00000546881 HSPH1Q92598 858 aa11.46□□□□□ -0.57
RAB5C-203ENST00000546881 ZNF653Q96CK0 615 aa11.46□□□□□ -0.57
RAB5C-203ENST00000546881 DTD2Q96FN9 168 aa11.46□□□□□ -0.57
RAB5C-203ENST00000546881 ZNF599Q96NL3 588 aa11.46□□□□□ -0.57
RAB5C-203ENST00000546881 TEX101Q9BY14 249 aa11.46□□□□□ -0.57
RAB5C-203ENST00000546881 CD84Q9UIB8 345 aa11.46□□□□□ -0.57
RAB5C-203ENST00000546881 UNC13CQ8NB66 2214 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 IGHV5-10-1A0A0J9YXX1 117 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 A0A1W2PQ67 120 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 LRRC53A6NM62 1247 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 STMND1H3BQB6 276 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 ARHGAP6O43182 974 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 SOCS5O75159 536 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 LRCH4O75427 683 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 FTLP02792 175 aaPredicted RBP11.45□□□□□ -0.58
RAB5C-203ENST00000546881 FUCA1P04066 466 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 LHCGRP22888 699 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 AMPD1P23109 780 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 CD82P27701 267 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 ACTR1BP42025 376 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 GPR1P46091 355 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 ATP1A2P50993 1020 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 ACTR1AP61163 376 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 CDK3Q00526 305 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 CTBSQ01459 385 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 ITKQ08881 620 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 TRAF2Q12933 501 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 DPYSQ14117 519 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 NR1I3Q14994 352 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 TMCO3Q6UWJ1 677 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 XKR5Q6UX68 686 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 ZNF574Q6ZN55 896 aaPredicted RBP11.45□□□□□ -0.58
RAB5C-203ENST00000546881 ATG14Q6ZNE5 492 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 Q6ZVL8 140 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 CYP4V2Q6ZWL3 525 aaPredicted RBP11.45□□□□□ -0.58
RAB5C-203ENST00000546881 MARK2Q7KZI7 788 aaKnown RBP11.45□□□□□ -0.58
RAB5C-203ENST00000546881 TSPAN33Q86UF1 283 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 DTX1Q86Y01 620 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 PGBD5Q8N414 524 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 ATPAF2Q8N5M1 289 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 LZTR1Q8N653 840 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 PMEPA1Q969W9 287 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 NUDCD1Q96RS6 583 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 FRMD8Q9BZ67 464 aaPredicted RBP11.45□□□□□ -0.58
RAB5C-203ENST00000546881 HAUS4Q9H6D7 363 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 NOD2Q9HC29 1040 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 ETNK2Q9NVF9 386 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 TRNAU1APQ9NX07 287 aaKnown RBP11.45□□□□□ -0.58
RAB5C-203ENST00000546881 KCTD5Q9NXV2 234 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 IL17BQ9UHF5 180 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 PHTF1Q9UMS5 762 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 TMEM98Q9Y2Y6 226 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 PLEKHM1Q9Y4G2 1056 aa11.45□□□□□ -0.58
RAB5C-203ENST00000546881 MYO18BQ8IUG5 2567 aa11.44□□□□□ -0.58
RAB5C-203ENST00000546881 TRBV23OR9-2A0A075B6M9 112 aa11.44□□□□□ -0.58
RAB5C-203ENST00000546881 A0A0U1RQS6 177 aa11.44□□□□□ -0.58
RAB5C-203ENST00000546881 NPIPB15A6NHN6 443 aaPredicted RBP11.44□□□□□ -0.58
RAB5C-203ENST00000546881 HGSO14964 777 aaPredicted RBP11.44□□□□□ -0.58
RAB5C-203ENST00000546881 HTRA2O43464 458 aaPredicted RBP11.44□□□□□ -0.58
RAB5C-203ENST00000546881 PPFIA2O75334 1257 aa11.44□□□□□ -0.58
RAB5C-203ENST00000546881 SFTPCP11686 197 aa11.44□□□□□ -0.58
RAB5C-203ENST00000546881 CD1CP29017 333 aa11.44□□□□□ -0.58
RAB5C-203ENST00000546881 CSTF2P33240 577 aaKnown RBP eCLIP11.44□□□□□ -0.58
RAB5C-203ENST00000546881 HSPA9P38646 679 aaKnown RBP11.44□□□□□ -0.58
RAB5C-203ENST00000546881 ADCY8P40145 1251 aa11.44□□□□□ -0.58
RAB5C-203ENST00000546881 MMP13P45452 471 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 221 ms