RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 LPOP22079 712 aaPredicted RBP14.94□□□□□ -0.02
NUP54-213ENST00000513352 NPY2RP49146 381 aa14.94□□□□□ -0.02
NUP54-213ENST00000513352 SPINT3P49223 89 aa14.94□□□□□ -0.02
NUP54-213ENST00000513352 CLDN2P57739 230 aa14.94□□□□□ -0.02
NUP54-213ENST00000513352 TMPRSS15P98073 1019 aa14.94□□□□□ -0.02
NUP54-213ENST00000513352 PDE1BQ01064 536 aa14.94□□□□□ -0.02
NUP54-213ENST00000513352 IRF4Q15306 451 aa14.94□□□□□ -0.02
NUP54-213ENST00000513352 DNAJC21Q5F1R6 531 aaKnown RBP14.94□□□□□ -0.02
NUP54-213ENST00000513352 HIBCHQ6NVY1 386 aaPredicted RBP14.94□□□□□ -0.02
NUP54-213ENST00000513352 ZNF534Q76KX8 674 aa14.94□□□□□ -0.02
NUP54-213ENST00000513352 SLC6A18Q96N87 628 aa14.94□□□□□ -0.02
NUP54-213ENST00000513352 SERPINB12Q96P63 405 aa14.94□□□□□ -0.02
NUP54-213ENST00000513352 EBF2Q9HAK2 575 aa14.94□□□□□ -0.02
NUP54-213ENST00000513352 EPB41L5Q9HCM4 733 aa14.94□□□□□ -0.02
NUP54-213ENST00000513352 SYBUQ9NX95 663 aa14.94□□□□□ -0.02
NUP54-213ENST00000513352 WHRNQ9P202 907 aa14.94□□□□□ -0.02
NUP54-213ENST00000513352 KCTD3Q9Y597 815 aa14.94□□□□□ -0.02
NUP54-213ENST00000513352 MAD1L1Q9Y6D9 718 aa14.94□□□□□ -0.02
NUP54-213ENST00000513352 SMAPO00193 183 aa14.93□□□□□ -0.02
NUP54-213ENST00000513352 FPGTO14772 594 aa14.93□□□□□ -0.02
NUP54-213ENST00000513352 SLU7O95391 586 aaKnown RBP14.93□□□□□ -0.02
NUP54-213ENST00000513352 MLNP12872 115 aa14.93□□□□□ -0.02
NUP54-213ENST00000513352 GNSP15586 552 aa14.93□□□□□ -0.02
NUP54-213ENST00000513352 GM2AP17900 193 aa14.93□□□□□ -0.02
NUP54-213ENST00000513352 ADRA1DP25100 572 aa14.93□□□□□ -0.02
NUP54-213ENST00000513352 IGFALSP35858 605 aa14.93□□□□□ -0.02
NUP54-213ENST00000513352 HMGCLP35914 325 aa14.93□□□□□ -0.02
NUP54-213ENST00000513352 PLTPP55058 493 aa14.93□□□□□ -0.02
NUP54-213ENST00000513352 ARL4CP56559 192 aa14.93□□□□□ -0.02
NUP54-213ENST00000513352 LAMB3Q13751 1172 aa14.93□□□□□ -0.02
NUP54-213ENST00000513352 PTPRCAPQ14761 206 aa14.93□□□□□ -0.02
NUP54-213ENST00000513352 STAT4Q14765 748 aa14.93□□□□□ -0.02
NUP54-213ENST00000513352 WSCD2Q2TBF2 565 aa14.93□□□□□ -0.02
NUP54-213ENST00000513352 BBS9Q3SYG4 887 aa14.93□□□□□ -0.02
NUP54-213ENST00000513352 LAIR1Q6GTX8 287 aa14.93□□□□□ -0.02
NUP54-213ENST00000513352 RAET1GQ6H3X3 334 aa14.93□□□□□ -0.02
NUP54-213ENST00000513352 PTAR1Q7Z6K3 402 aaPredicted RBP14.93□□□□□ -0.02
NUP54-213ENST00000513352 CAND1Q86VP6 1230 aaKnown RBP14.93□□□□□ -0.02
NUP54-213ENST00000513352 NRSN1Q8IZ57 195 aa14.93□□□□□ -0.02
NUP54-213ENST00000513352 TP53I13Q8NBR0 393 aaPredicted RBP14.93□□□□□ -0.02
NUP54-213ENST00000513352 DENND6BQ8NEG7 585 aa14.93□□□□□ -0.02
NUP54-213ENST00000513352 OR4K2Q8NGD2 314 aa14.93□□□□□ -0.02
NUP54-213ENST00000513352 OR13C4Q8NGS5 318 aa14.93□□□□□ -0.02
NUP54-213ENST00000513352 ASB12Q8WXK4 309 aa14.93□□□□□ -0.02
NUP54-213ENST00000513352 SCAMP4Q969E2 229 aa14.93□□□□□ -0.02
NUP54-213ENST00000513352 AP2M1Q96CW1 435 aa14.93□□□□□ -0.02
NUP54-213ENST00000513352 EID2BQ96D98 161 aa14.93□□□□□ -0.02
NUP54-213ENST00000513352 DNAJC1Q96KC8 554 aaKnown RBP14.93□□□□□ -0.02
NUP54-213ENST00000513352 PWWP2AQ96N64 755 aa14.93□□□□□ -0.02
NUP54-213ENST00000513352 RIOK2Q9BVS4 552 aaKnown RBP14.93□□□□□ -0.02
NUP54-213ENST00000513352 SPATA16Q9BXB7 569 aa14.93□□□□□ -0.02
NUP54-213ENST00000513352 IL22Q9GZX6 179 aa14.93□□□□□ -0.02
NUP54-213ENST00000513352 ABCG8Q9H221 673 aa14.93□□□□□ -0.02
NUP54-213ENST00000513352 TM9SF3Q9HD45 589 aa14.93□□□□□ -0.02
NUP54-213ENST00000513352 RAD18Q9NS91 495 aa14.93□□□□□ -0.02
NUP54-213ENST00000513352 KCTD5Q9NXV2 234 aa14.93□□□□□ -0.02
NUP54-213ENST00000513352 GMEB2Q9UKD1 530 aa14.93□□□□□ -0.02
NUP54-213ENST00000513352 TCAF1Q9Y4C2 921 aa14.93□□□□□ -0.02
NUP54-213ENST00000513352 RALGAPA1Q6GYQ0 2036 aa14.93□□□□□ -0.02
NUP54-213ENST00000513352 H0Y8X5 98 aa14.92□□□□□ -0.02
NUP54-213ENST00000513352 BCAT2O15382 392 aaPredicted RBP14.92□□□□□ -0.02
NUP54-213ENST00000513352 CFIP05156 583 aa14.92□□□□□ -0.02
NUP54-213ENST00000513352 BPIP17213 487 aa14.92□□□□□ -0.02
NUP54-213ENST00000513352 SPAM1P38567 509 aa14.92□□□□□ -0.02
NUP54-213ENST00000513352 GPR1P46091 355 aa14.92□□□□□ -0.02
NUP54-213ENST00000513352 ZNF140P52738 457 aaPredicted RBP14.92□□□□□ -0.02
NUP54-213ENST00000513352 HLTFQ14527 1009 aaKnown RBP eCLIP14.92□□□□□ -0.02
NUP54-213ENST00000513352 CCDC6Q16204 474 aa14.92□□□□□ -0.02
NUP54-213ENST00000513352 HIF1AQ16665 826 aa14.92□□□□□ -0.02
NUP54-213ENST00000513352 PCID2Q5JVF3 399 aa14.92□□□□□ -0.02
NUP54-213ENST00000513352 LAYNQ6UX15 382 aa14.92□□□□□ -0.02
NUP54-213ENST00000513352 FAM151BQ6UXP7 276 aa14.92□□□□□ -0.02
NUP54-213ENST00000513352 KDM7AQ6ZMT4 941 aa14.92□□□□□ -0.02
NUP54-213ENST00000513352 TECPR1Q7Z6L1 1165 aa14.92□□□□□ -0.02
NUP54-213ENST00000513352 SYT12Q8IV01 421 aa14.92□□□□□ -0.02
NUP54-213ENST00000513352 PDIK1LQ8N165 341 aa14.92□□□□□ -0.02
NUP54-213ENST00000513352 MPP5Q8N3R9 675 aa14.92□□□□□ -0.02
NUP54-213ENST00000513352 STYXQ8WUJ0 223 aa14.92□□□□□ -0.02
NUP54-213ENST00000513352 IFT81Q8WYA0 676 aa14.92□□□□□ -0.02
NUP54-213ENST00000513352 DNASE2BQ8WZ79 361 aa14.92□□□□□ -0.02
NUP54-213ENST00000513352 LENG8Q96PV6 779 aaPredicted RBP14.92□□□□□ -0.02
NUP54-213ENST00000513352 FRMD8Q9BZ67 464 aaPredicted RBP14.92□□□□□ -0.02
NUP54-213ENST00000513352 ARRDC1-AS1Q9H2J1 176 aa14.92□□□□□ -0.02
NUP54-213ENST00000513352 SEMA4AQ9H3S1 761 aa14.92□□□□□ -0.02
NUP54-213ENST00000513352 FAM83DQ9H4H8 585 aa14.92□□□□□ -0.02
NUP54-213ENST00000513352 MBNL1Q9NR56 388 aaKnown RBP14.92□□□□□ -0.02
NUP54-213ENST00000513352 FAM114A2Q9NRY5 505 aa14.92□□□□□ -0.02
NUP54-213ENST00000513352 GRHL1Q9NZI5 618 aa14.92□□□□□ -0.02
NUP54-213ENST00000513352 IL17CQ9P0M4 197 aa14.92□□□□□ -0.02
NUP54-213ENST00000513352 SUSD2Q9UGT4 822 aa14.92□□□□□ -0.02
NUP54-213ENST00000513352 RAPGEFL1Q9UHV5 662 aa14.92□□□□□ -0.02
NUP54-213ENST00000513352 DMGDHQ9UI17 866 aaKnown RBP14.92□□□□□ -0.02
NUP54-213ENST00000513352 FKBPLQ9UIM3 349 aa14.92□□□□□ -0.02
NUP54-213ENST00000513352 SLCO1B1Q9Y6L6 691 aa14.92□□□□□ -0.02
NUP54-213ENST00000513352 SDR42E2A6NKP2 422 aa14.91□□□□□ -0.02
NUP54-213ENST00000513352 A6NNZ2 444 aa14.91□□□□□ -0.02
NUP54-213ENST00000513352 CCL22O00626 93 aa14.91□□□□□ -0.02
NUP54-213ENST00000513352 LDB2O43679 373 aa14.91□□□□□ -0.02
NUP54-213ENST00000513352 BANF1O75531 89 aa14.91□□□□□ -0.02
NUP54-213ENST00000513352 EPN2O95208 641 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms