RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 GARNL3Q5VVW2 1013 aa5.53□□□□□ -1.52
SSR3-208ENST00000496050 SLC30A6Q6NXT4 461 aa5.53□□□□□ -1.52
SSR3-208ENST00000496050 CRELD2Q6UXH1 353 aaPredicted RBP5.53□□□□□ -1.52
SSR3-208ENST00000496050 PQLC2Q6ZP29 291 aa5.53□□□□□ -1.52
SSR3-208ENST00000496050 MTSS1LQ765P7 747 aa5.53□□□□□ -1.52
SSR3-208ENST00000496050 CACNA2D4Q7Z3S7 1137 aa5.53□□□□□ -1.52
SSR3-208ENST00000496050 CTU1Q7Z7A3 348 aaKnown RBP5.53□□□□□ -1.52
SSR3-208ENST00000496050 ADGRA1Q86SQ6 560 aa5.53□□□□□ -1.52
SSR3-208ENST00000496050 PIP4P1Q86T03 277 aa5.53□□□□□ -1.52
SSR3-208ENST00000496050 DNAAF5Q86Y56 855 aa5.53□□□□□ -1.52
SSR3-208ENST00000496050 SRRM1Q8IYB3 904 aaKnown RBP5.53□□□□□ -1.52
SSR3-208ENST00000496050 AVL9Q8NBF6 648 aa5.53□□□□□ -1.52
SSR3-208ENST00000496050 HJURPQ8NCD3 748 aaPredicted RBP5.53□□□□□ -1.52
SSR3-208ENST00000496050 C7orf57Q8NEG2 295 aa5.53□□□□□ -1.52
SSR3-208ENST00000496050 OR8K5Q8NH50 307 aa5.53□□□□□ -1.52
SSR3-208ENST00000496050 PRPF31Q8WWY3 499 aaKnown RBP5.53□□□□□ -1.52
SSR3-208ENST00000496050 ERGIC1Q969X5 290 aa5.53□□□□□ -1.52
SSR3-208ENST00000496050 SLC25A28Q96A46 364 aa5.53□□□□□ -1.52
SSR3-208ENST00000496050 LRRC59Q96AG4 307 aaKnown RBP5.53□□□□□ -1.52
SSR3-208ENST00000496050 ACOX2Q99424 681 aa5.53□□□□□ -1.52
SSR3-208ENST00000496050 KRCC1Q9NPI7 259 aaPredicted RBP5.53□□□□□ -1.52
SSR3-208ENST00000496050 SLC35C2Q9NQQ7 365 aa5.53□□□□□ -1.52
SSR3-208ENST00000496050 POT1Q9NUX5 634 aa5.53□□□□□ -1.52
SSR3-208ENST00000496050 OR6C3Q9NZP0 311 aa5.53□□□□□ -1.52
SSR3-208ENST00000496050 EXO1Q9UQ84 846 aaKnown RBP5.53□□□□□ -1.52
SSR3-208ENST00000496050 RPS10-NUDT3A0A1W2PQS6 291 aa5.52□□□□□ -1.53
SSR3-208ENST00000496050 OR2A25A4D2G3 310 aa5.52□□□□□ -1.53
SSR3-208ENST00000496050 H0YGN5 161 aa5.52□□□□□ -1.53
SSR3-208ENST00000496050 ASAP2O43150 1006 aa5.52□□□□□ -1.53
SSR3-208ENST00000496050 MITFO75030 526 aaPredicted RBP5.52□□□□□ -1.53
SSR3-208ENST00000496050 VNN2O95498 520 aa5.52□□□□□ -1.53
SSR3-208ENST00000496050 NAGAP17050 411 aa5.52□□□□□ -1.53
SSR3-208ENST00000496050 HOXC9P31274 260 aa5.52□□□□□ -1.53
SSR3-208ENST00000496050 THPOP40225 353 aa5.52□□□□□ -1.53
SSR3-208ENST00000496050 STAT2P52630 851 aa5.52□□□□□ -1.53
SSR3-208ENST00000496050 MYBPC2Q14324 1141 aa5.52□□□□□ -1.53
SSR3-208ENST00000496050 RABEP1Q15276 862 aa5.52□□□□□ -1.53
SSR3-208ENST00000496050 TMEM266Q2M3C6 531 aa5.52□□□□□ -1.53
SSR3-208ENST00000496050 C15orf59Q2T9L4 293 aaPredicted RBP5.52□□□□□ -1.53
SSR3-208ENST00000496050 LRIF1Q5T3J3 769 aa5.52□□□□□ -1.53
SSR3-208ENST00000496050 HIST2H2BCQ6DN03 193 aa5.52□□□□□ -1.53
SSR3-208ENST00000496050 HIST2H2BDQ6DRA6 164 aa5.52□□□□□ -1.53
SSR3-208ENST00000496050 CFAP77Q6ZQR2 320 aa5.52□□□□□ -1.53
SSR3-208ENST00000496050 Q6ZTK2 550 aa5.52□□□□□ -1.53
SSR3-208ENST00000496050 PIM3Q86V86 326 aa5.52□□□□□ -1.53
SSR3-208ENST00000496050 EPHX4Q8IUS5 362 aa5.52□□□□□ -1.53
SSR3-208ENST00000496050 CCDC191Q8NCU4 936 aa5.52□□□□□ -1.53
SSR3-208ENST00000496050 ARRDC2Q8TBH0 407 aa5.52□□□□□ -1.53
SSR3-208ENST00000496050 RPL36ALQ969Q0 106 aaKnown RBP5.52□□□□□ -1.53
SSR3-208ENST00000496050 PPP1R13BQ96KQ4 1090 aa5.52□□□□□ -1.53
SSR3-208ENST00000496050 LRFN5Q96NI6 719 aa5.52□□□□□ -1.53
SSR3-208ENST00000496050 NUDCD1Q96RS6 583 aa5.52□□□□□ -1.53
SSR3-208ENST00000496050 MMTAG2Q9BU76 263 aaKnown RBP5.52□□□□□ -1.53
SSR3-208ENST00000496050 HRH4Q9H3N8 390 aa5.52□□□□□ -1.53
SSR3-208ENST00000496050 UBA2Q9UBT2 640 aaPredicted RBP5.52□□□□□ -1.53
SSR3-208ENST00000496050 CFDP1Q9UEE9 299 aaPredicted RBP5.52□□□□□ -1.53
SSR3-208ENST00000496050 TTC7AQ9ULT0 858 aaPredicted RBP5.52□□□□□ -1.53
SSR3-208ENST00000496050 FRMD4BQ9Y2L6 1034 aa5.52□□□□□ -1.53
SSR3-208ENST00000496050 WNT9BO14905 357 aa5.51□□□□□ -1.53
SSR3-208ENST00000496050 OGG1O15527 345 aa5.51□□□□□ -1.53
SSR3-208ENST00000496050 DKC1O60832 514 aaKnown RBP eCLIP5.51□□□□□ -1.53
SSR3-208ENST00000496050 CSPG5O95196 566 aa5.51□□□□□ -1.53
SSR3-208ENST00000496050 ANXA7P20073 488 aaKnown RBP5.51□□□□□ -1.53
SSR3-208ENST00000496050 RRM1P23921 792 aa5.51□□□□□ -1.53
SSR3-208ENST00000496050 PIGAP37287 484 aa5.51□□□□□ -1.53
SSR3-208ENST00000496050 ABCG1P45844 678 aa5.51□□□□□ -1.53
SSR3-208ENST00000496050 KCNJ4P48050 445 aa5.51□□□□□ -1.53
SSR3-208ENST00000496050 PSMC6P62333 389 aa5.51□□□□□ -1.53
SSR3-208ENST00000496050 KCNC3Q14003 757 aa5.51□□□□□ -1.53
SSR3-208ENST00000496050 PRTGQ2VWP7 1150 aa5.51□□□□□ -1.53
SSR3-208ENST00000496050 MMEL1Q495T6 779 aa5.51□□□□□ -1.53
SSR3-208ENST00000496050 FSCBQ5H9T9 825 aa5.51□□□□□ -1.53
SSR3-208ENST00000496050 DNTTIP2Q5QJE6 756 aaKnown RBP5.51□□□□□ -1.53
SSR3-208ENST00000496050 ANKRD54Q6NXT1 300 aa5.51□□□□□ -1.53
SSR3-208ENST00000496050 PDXDC1Q6P996 788 aa5.51□□□□□ -1.53
SSR3-208ENST00000496050 DPPA4Q7L190 304 aa5.51□□□□□ -1.53
SSR3-208ENST00000496050 SHFQ7M4L6 423 aa5.51□□□□□ -1.53
SSR3-208ENST00000496050 TSPAN33Q86UF1 283 aa5.51□□□□□ -1.53
SSR3-208ENST00000496050 ARID3BQ8IVW6 561 aaPredicted RBP5.51□□□□□ -1.53
SSR3-208ENST00000496050 MCEMP1Q8IX19 187 aa5.51□□□□□ -1.53
SSR3-208ENST00000496050 MIGA1Q8NAN2 632 aa5.51□□□□□ -1.53
SSR3-208ENST00000496050 POMGNT2Q8NAT1 580 aa5.51□□□□□ -1.53
SSR3-208ENST00000496050 ZNF548Q8NEK5 533 aaPredicted RBP5.51□□□□□ -1.53
SSR3-208ENST00000496050 APPL2Q8NEU8 664 aa5.51□□□□□ -1.53
SSR3-208ENST00000496050 NSMCE1Q8WV22 266 aa5.51□□□□□ -1.53
SSR3-208ENST00000496050 APOLD1Q96LR9 279 aa5.51□□□□□ -1.53
SSR3-208ENST00000496050 APOL6Q9BWW8 343 aa5.51□□□□□ -1.53
SSR3-208ENST00000496050 FOXP1Q9H334 677 aaPredicted RBP5.51□□□□□ -1.53
SSR3-208ENST00000496050 SLITRK6Q9H5Y7 841 aa5.51□□□□□ -1.53
SSR3-208ENST00000496050 LTB4R2Q9NPC1 389 aa5.51□□□□□ -1.53
SSR3-208ENST00000496050 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.51□□□□□ -1.53
SSR3-208ENST00000496050 PSD3Q9NYI0 1048 aa5.51□□□□□ -1.53
SSR3-208ENST00000496050 MARCH4Q9P2E8 410 aaPredicted RBP5.51□□□□□ -1.53
SSR3-208ENST00000496050 CPSF2Q9P2I0 782 aaKnown RBP5.51□□□□□ -1.53
SSR3-208ENST00000496050 NFKBIL1Q9UBC1 381 aaPredicted RBP5.51□□□□□ -1.53
SSR3-208ENST00000496050 FBXW11Q9UKB1 542 aa5.51□□□□□ -1.53
SSR3-208ENST00000496050 PTRH2Q9Y3E5 179 aaKnown RBP5.51□□□□□ -1.53
SSR3-208ENST00000496050 MAGED1Q9Y5V3 778 aaPredicted RBP5.51□□□□□ -1.53
SSR3-208ENST00000496050 ARHGEF40Q8TER5 1519 aa5.51□□□□□ -1.53
SSR3-208ENST00000496050 I6L893 689 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms