RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 PTGES3LE9PB15 166 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 FKBP9O95302 570 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 PRKCGP05129 697 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 MSH3P20585 1137 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 GRIA3P42263 894 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 UPP1Q16831 310 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 ARHGAP36Q6ZRI8 547 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 FKBP9P1Q75LS8 142 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 NANOGNBQ7Z5D8 188 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 NECAB2Q7Z6G3 386 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 DHRSXQ8N5I4 330 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 ARL10Q8N8L6 244 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 FAM47BQ8NA70 645 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 KCTD13Q8WZ19 329 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 NTAN1Q96AB6 310 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 FUBP3Q96I24 572 aaKnown RBP eCLIP11.32□□□□□ -0.6
SMPD4-218ENST00000482171 VPS45Q9NRW7 570 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 FCF1Q9Y324 198 aaKnown RBP11.32□□□□□ -0.6
SMPD4-218ENST00000482171 SH3GLB1Q9Y371 365 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 FFAR3O14843 346 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 GPR42O15529 346 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 SYNCRIPO60506 623 aaKnown RBP11.31□□□□□ -0.6
SMPD4-218ENST00000482171 SIN3BO75182 1162 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 HLA-DPA1P20036 260 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 SNRPD1P62314 119 aaKnown RBP11.31□□□□□ -0.6
SMPD4-218ENST00000482171 SFSWAPQ12872 951 aaKnown RBP11.31□□□□□ -0.6
SMPD4-218ENST00000482171 CBX3Q13185 183 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 MTA1Q13330 715 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 TRIP4Q15650 581 aaPredicted RBP11.31□□□□□ -0.6
SMPD4-218ENST00000482171 FNDC3BQ53EP0 1204 aaKnown RBP11.31□□□□□ -0.6
SMPD4-218ENST00000482171 EFL1Q7Z2Z2 1120 aaKnown RBP11.31□□□□□ -0.6
SMPD4-218ENST00000482171 BANPQ8N9N5 519 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 ZNF296Q8WUU4 475 aaPredicted RBP11.31□□□□□ -0.6
SMPD4-218ENST00000482171 DLG3Q92796 817 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 DGCR6LQ9BY27 220 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 ASPSCR1Q9BZE9 553 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 GPR62Q9BZJ7 368 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 SLC25A51Q9H1U9 297 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 NOL6Q9H6R4 1146 aaKnown RBP11.31□□□□□ -0.6
SMPD4-218ENST00000482171 DNAAF2Q9NVR5 837 aaKnown RBP11.31□□□□□ -0.6
SMPD4-218ENST00000482171 RAI2Q9Y5P3 530 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 CNTN5O94779 1100 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 HLA-DQB2P05538 268 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 LAG3P18627 525 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 ACVRL1P37023 503 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 SLC18A1P54219 525 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 SLC9A4Q6AI14 798 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 SYTL1Q8IYJ3 562 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 ARL15Q9NXU5 204 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 KIAA1551Q9HCM1 1747 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 TMEM247A6NEH6 219 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 UGT2B4P06133 528 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 ATP6V1B2P21281 511 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 YBEYP58557 167 aaPredicted RBP11.31□□□□□ -0.6
SMPD4-218ENST00000482171 SLC10A2Q12908 348 aaPredicted RBP11.31□□□□□ -0.6
SMPD4-218ENST00000482171 HNRNPDQ14103 355 aaKnown RBP11.31□□□□□ -0.6
SMPD4-218ENST00000482171 KCNJ11Q14654 390 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 NR1D2Q14995 579 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 LRRC73Q5JTD7 316 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 ATXN7L2Q5T6C5 722 aaPredicted RBP11.31□□□□□ -0.6
SMPD4-218ENST00000482171 TXNDC8Q6A555 127 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 SDE2Q6IQ49 451 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 CNSTQ6PJW8 725 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 RIN3Q8TB24 985 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 STAG3L4Q8TBR4 150 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 TMEM159Q96B96 161 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 PPP1R10Q96QC0 940 aaKnown RBP11.31□□□□□ -0.6
SMPD4-218ENST00000482171 ATP13A3Q9H7F0 1226 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 GIMAP4Q9NUV9 329 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 PTTG2Q9NZH5 202 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 COPG2Q9UBF2 871 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 ZNF180Q9UJW8 692 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 POMPQ9Y244 141 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 TMA7Q9Y2S6 64 aaKnown RBP11.31□□□□□ -0.6
SMPD4-218ENST00000482171 HS3ST4Q9Y661 456 aa11.31□□□□□ -0.6
SMPD4-218ENST00000482171 UBR3Q6ZT12 1888 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 A0A087X1B8 175 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 KPNA4O00629 521 aaPredicted RBP11.3□□□□□ -0.6
SMPD4-218ENST00000482171 RAD51BO15315 384 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 HDAC3O15379 428 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 CRHR1P34998 444 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 RAP1GDS1P52306 607 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 TAS2R39P59534 338 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 XIAPP98170 497 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 DLG1Q12959 904 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 KLF10Q13118 480 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 CYP51A1Q16850 503 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 RGS21Q2M5E4 152 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 PARP15Q460N3 678 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 ATP6AP1LQ52LC2 224 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 FAM45BPQ6NSW5 357 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 RD3Q7Z3Z2 195 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 BNIPLQ7Z465 357 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 TMCO2Q7Z6W1 182 aaPredicted RBP11.3□□□□□ -0.6
SMPD4-218ENST00000482171 CDYL2Q8N8U2 506 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 FAM45AQ8TCE6 357 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 MAGEE2Q8TD90 523 aaPredicted RBP11.3□□□□□ -0.6
SMPD4-218ENST00000482171 RBBP8Q99708 897 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 CIB1Q99828 191 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 EXOSC4Q9NPD3 245 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms