RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 DAAM1Q9Y4D1 1078 aa5.08□□□□□ -1.6
HMGB3P5-201ENST00000428894 MYH3P11055 1940 aa5.07□□□□□ -1.6
HMGB3P5-201ENST00000428894 IGHV4-28A0A0C4DH34 117 aa5.07□□□□□ -1.6
HMGB3P5-201ENST00000428894 A0A1B0GUV1 79 aa5.07□□□□□ -1.6
HMGB3P5-201ENST00000428894 CLRN2A0PK11 232 aa5.07□□□□□ -1.6
HMGB3P5-201ENST00000428894 OR6C68A6NDL8 312 aa5.07□□□□□ -1.6
HMGB3P5-201ENST00000428894 SMTNL1A8MU46 457 aa5.07□□□□□ -1.6
HMGB3P5-201ENST00000428894 KRT86O43790 486 aa5.07□□□□□ -1.6
HMGB3P5-201ENST00000428894 CSF1P09603 554 aa5.07□□□□□ -1.6
HMGB3P5-201ENST00000428894 YWHAQP27348 245 aa5.07□□□□□ -1.6
HMGB3P5-201ENST00000428894 MVDP53602 400 aa5.07□□□□□ -1.6
HMGB3P5-201ENST00000428894 PRKAA2P54646 552 aa5.07□□□□□ -1.6
HMGB3P5-201ENST00000428894 ERVFC1-1P60608 527 aa5.07□□□□□ -1.6
HMGB3P5-201ENST00000428894 ARHGAP8P85298 464 aa5.07□□□□□ -1.6
HMGB3P5-201ENST00000428894 THOC5Q13769 683 aaKnown RBP5.07□□□□□ -1.6
HMGB3P5-201ENST00000428894 VGLL4Q14135 290 aa5.07□□□□□ -1.6
HMGB3P5-201ENST00000428894 KRT81Q14533 505 aa5.07□□□□□ -1.6
HMGB3P5-201ENST00000428894 AP5B1Q2VPB7 878 aa5.07□□□□□ -1.6
HMGB3P5-201ENST00000428894 H1FNTQ75WM6 255 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P5-201ENST00000428894 TMC8Q8IU68 726 aa5.07□□□□□ -1.6
HMGB3P5-201ENST00000428894 RBFAQ8N0V3 343 aa5.07□□□□□ -1.6
HMGB3P5-201ENST00000428894 RUBCNQ92622 972 aa5.07□□□□□ -1.6
HMGB3P5-201ENST00000428894 KTI12Q96EK9 354 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P5-201ENST00000428894 FIZ1Q96SL8 496 aa5.07□□□□□ -1.6
HMGB3P5-201ENST00000428894 SLC25A33Q9BSK2 321 aa5.07□□□□□ -1.6
HMGB3P5-201ENST00000428894 C1QTNF4Q9BXJ3 329 aa5.07□□□□□ -1.6
HMGB3P5-201ENST00000428894 G6PC2Q9NQR9 355 aa5.07□□□□□ -1.6
HMGB3P5-201ENST00000428894 OCIAD1Q9NX40 245 aa5.07□□□□□ -1.6
HMGB3P5-201ENST00000428894 GRHL1Q9NZI5 618 aa5.07□□□□□ -1.6
HMGB3P5-201ENST00000428894 GRHPRQ9UBQ7 328 aa5.07□□□□□ -1.6
HMGB3P5-201ENST00000428894 ICAM5Q9UMF0 924 aa5.07□□□□□ -1.6
HMGB3P5-201ENST00000428894 LAMA2P24043 3122 aaKnown RBP5.07□□□□□ -1.6
HMGB3P5-201ENST00000428894 MGAMO43451 1857 aa5.07□□□□□ -1.6
HMGB3P5-201ENST00000428894 FAM205AQ6ZU69 1335 aa5.06□□□□□ -1.6
HMGB3P5-201ENST00000428894 KDM4EB2RXH2 506 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P5-201ENST00000428894 CHL1O00533 1208 aa5.06□□□□□ -1.6
HMGB3P5-201ENST00000428894 SERPINI2O75830 405 aa5.06□□□□□ -1.6
HMGB3P5-201ENST00000428894 METTL18O95568 372 aa5.06□□□□□ -1.6
HMGB3P5-201ENST00000428894 CKMT1AP12532 417 aa5.06□□□□□ -1.6
HMGB3P5-201ENST00000428894 CST5P28325 142 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P5-201ENST00000428894 MTNR1AP48039 350 aa5.06□□□□□ -1.6
HMGB3P5-201ENST00000428894 EEF1A2Q05639 463 aaKnown RBP5.06□□□□□ -1.6
HMGB3P5-201ENST00000428894 PPIL2Q13356 520 aa5.06□□□□□ -1.6
HMGB3P5-201ENST00000428894 BYSLQ13895 437 aaKnown RBP5.06□□□□□ -1.6
HMGB3P5-201ENST00000428894 KIF19Q2TAC6 998 aa5.06□□□□□ -1.6
HMGB3P5-201ENST00000428894 Q7L0L9 218 aa5.06□□□□□ -1.6
HMGB3P5-201ENST00000428894 ANKRD23Q86SG2 305 aa5.06□□□□□ -1.6
HMGB3P5-201ENST00000428894 CNPY4Q8N129 248 aa5.06□□□□□ -1.6
HMGB3P5-201ENST00000428894 GALNT15Q8N3T1 639 aa5.06□□□□□ -1.6
HMGB3P5-201ENST00000428894 NEXN-AS1Q8NBZ9 246 aa5.06□□□□□ -1.6
HMGB3P5-201ENST00000428894 VPS37AQ8NEZ2 397 aa5.06□□□□□ -1.6
HMGB3P5-201ENST00000428894 NCSTNQ92542 709 aa5.06□□□□□ -1.6
HMGB3P5-201ENST00000428894 ATOH1Q92858 354 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P5-201ENST00000428894 CXorf56Q9H5V9 222 aa5.06□□□□□ -1.6
HMGB3P5-201ENST00000428894 ZNF556Q9HAH1 456 aa5.06□□□□□ -1.6
HMGB3P5-201ENST00000428894 NLKQ9UBE8 527 aa5.06□□□□□ -1.6
HMGB3P5-201ENST00000428894 EYSQ5T1H1 3165 aa5.05□□□□□ -1.6
HMGB3P5-201ENST00000428894 SSC5DA1L4H1 1573 aa5.05□□□□□ -1.6
HMGB3P5-201ENST00000428894 PRUNE2Q8WUY3 3088 aa5.05□□□□□ -1.6
HMGB3P5-201ENST00000428894 A0A096LPK6 155 aa5.05□□□□□ -1.6
HMGB3P5-201ENST00000428894 IGLV5-52A0A0A0MRZ9 124 aa5.05□□□□□ -1.6
HMGB3P5-201ENST00000428894 PLSCR5A0PG75 271 aa5.05□□□□□ -1.6
HMGB3P5-201ENST00000428894 LINC01553A4QN01 128 aa5.05□□□□□ -1.6
HMGB3P5-201ENST00000428894 IPO5O00410 1097 aaKnown RBP5.05□□□□□ -1.6
HMGB3P5-201ENST00000428894 LDB3O75112 727 aa5.05□□□□□ -1.6
HMGB3P5-201ENST00000428894 ZNF432O94892 652 aa5.05□□□□□ -1.6
HMGB3P5-201ENST00000428894 IL1AP01583 271 aa5.05□□□□□ -1.6
HMGB3P5-201ENST00000428894 IGKV3-20P01619 116 aa5.05□□□□□ -1.6
HMGB3P5-201ENST00000428894 PTMAP06454 111 aaKnown RBP5.05□□□□□ -1.6
HMGB3P5-201ENST00000428894 C21orf33P30042 268 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P5-201ENST00000428894 TMPOP42166 694 aaKnown RBP5.05□□□□□ -1.6
HMGB3P5-201ENST00000428894 BNC1Q01954 994 aa5.05□□□□□ -1.6
HMGB3P5-201ENST00000428894 NEXNQ0ZGT2 675 aa5.05□□□□□ -1.6
HMGB3P5-201ENST00000428894 GRSF1Q12849 480 aaKnown RBP eCLIP5.05□□□□□ -1.6
HMGB3P5-201ENST00000428894 CTTNQ14247 550 aaKnown RBP5.05□□□□□ -1.6
HMGB3P5-201ENST00000428894 IL13RA2Q14627 380 aa5.05□□□□□ -1.6
HMGB3P5-201ENST00000428894 SLC39A14Q15043 492 aa5.05□□□□□ -1.6
HMGB3P5-201ENST00000428894 ZNF484Q5JVG2 852 aa5.05□□□□□ -1.6
HMGB3P5-201ENST00000428894 NCAPH2Q6IBW4 605 aa5.05□□□□□ -1.6
HMGB3P5-201ENST00000428894 C15orf52Q6ZUT6 534 aaKnown RBP5.05□□□□□ -1.6
HMGB3P5-201ENST00000428894 DEFB118Q96PH6 123 aa5.05□□□□□ -1.6
HMGB3P5-201ENST00000428894 PARK7Q99497 189 aaKnown RBP5.05□□□□□ -1.6
HMGB3P5-201ENST00000428894 NPFFR1Q9GZQ6 430 aa5.05□□□□□ -1.6
HMGB3P5-201ENST00000428894 CHODLQ9H9P2 273 aa5.05□□□□□ -1.6
HMGB3P5-201ENST00000428894 FBXO40Q9UH90 709 aa5.05□□□□□ -1.6
HMGB3P5-201ENST00000428894 AGO1Q9UL18 857 aaKnown RBP5.05□□□□□ -1.6
HMGB3P5-201ENST00000428894 LAS1LQ9Y4W2 734 aaKnown RBP5.05□□□□□ -1.6
HMGB3P5-201ENST00000428894 OTOFQ9HC10 1997 aa5.05□□□□□ -1.6
HMGB3P5-201ENST00000428894 SPTBN5Q9NRC6 3674 aaKnown RBP5.05□□□□□ -1.6
HMGB3P5-201ENST00000428894 AK9Q5TCS8 1911 aa5.05□□□□□ -1.6
HMGB3P5-201ENST00000428894 COL4A1P02462 1669 aa5.05□□□□□ -1.6
HMGB3P5-201ENST00000428894 MUC3AQ02505 3323 aa5.05□□□□□ -1.6
HMGB3P5-201ENST00000428894 DOCK3Q8IZD9 2030 aa5.04□□□□□ -1.6
HMGB3P5-201ENST00000428894 TCP10L2B9ZVM9 353 aa5.04□□□□□ -1.6
HMGB3P5-201ENST00000428894 FAM157AC9JC47 383 aa5.04□□□□□ -1.6
HMGB3P5-201ENST00000428894 PDHXO00330 501 aa5.04□□□□□ -1.6
HMGB3P5-201ENST00000428894 GJC1P36383 396 aa5.04□□□□□ -1.6
HMGB3P5-201ENST00000428894 GPR12P47775 334 aa5.04□□□□□ -1.6
HMGB3P5-201ENST00000428894 MCM2P49736 904 aa5.04□□□□□ -1.6
HMGB3P5-201ENST00000428894 TUBA1BP68363 451 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms