RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 LIPT2A6NK58 231 aa5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 LIASO43766 372 aa5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 LATS1O95835 1130 aa5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 TUBB4AP04350 444 aa5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 ZNF8P17098 575 aaPredicted RBP5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 HADHAP40939 763 aa5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 SLC10A2Q12908 348 aaPredicted RBP5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 CUL4AQ13619 759 aa5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 VEPH1Q14D04 833 aa5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 RNPS1Q15287 305 aaKnown RBP5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 CCDC152Q4G0S7 254 aa5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 MIDNQ504T8 468 aa5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 CEP78Q5JTW2 689 aa5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 ENTPD8Q5MY95 495 aa5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 TTC39AQ5SRH9 613 aa5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 TTI2Q6NXR4 508 aa5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 UBE2Q1Q7Z7E8 422 aa5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 CCDC105Q8IYK2 499 aa5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 GALNT16Q8N428 558 aa5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 WDTC1Q8N5D0 677 aa5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 FRMD1Q8N878 549 aa5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 SLC16A11Q8NCK7 471 aa5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 WIPF2Q8TF74 440 aaPredicted RBP5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 SMARCE1Q969G3 411 aa5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 NSUN4Q96CB9 384 aaKnown RBP5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 CHFRQ96EP1 664 aa5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 FAM118BQ9BPY3 351 aa5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 CENPOQ9BU64 300 aa5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 NUF2Q9BZD4 464 aa5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 FTOQ9C0B1 505 aaKnown RBP eCLIP5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 RIOX1Q9H6W3 641 aa5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 PRKRIP1Q9H875 184 aaPredicted RBP5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 SPAG4Q9NPE6 437 aa5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 EHD2Q9NZN4 543 aa5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 NCKIPSDQ9NZQ3 722 aa5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 ADD3Q9UEY8 706 aaKnown RBP5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 PLEKHB1Q9UF11 243 aaPredicted RBP5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 TRPM7Q96QT4 1865 aa5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 A0A0C4DFX4 3053 aa5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 SSC5DA1L4H1 1573 aa5.84□□□□□ -1.47
RNU4-39P-201ENST00000362455 MED23Q9ULK4 1368 aa5.84□□□□□ -1.47
RNU4-39P-201ENST00000362455 KIR2DS5A0A0G2JLQ3 304 aa5.84□□□□□ -1.47
RNU4-39P-201ENST00000362455 LRRC53A6NM62 1247 aa5.84□□□□□ -1.47
RNU4-39P-201ENST00000362455 PTGES3LE9PB15 166 aa5.84□□□□□ -1.47
RNU4-39P-201ENST00000362455 F8W810 466 aa5.84□□□□□ -1.47
RNU4-39P-201ENST00000362455 KIR2DS3K7RE56 304 aa5.84□□□□□ -1.47
RNU4-39P-201ENST00000362455 EIF2S1P05198 315 aaKnown RBP5.84□□□□□ -1.47
RNU4-39P-201ENST00000362455 TTKP33981 857 aa5.84□□□□□ -1.47
RNU4-39P-201ENST00000362455 SLC16A2P36021 539 aa5.84□□□□□ -1.47
RNU4-39P-201ENST00000362455 GNAQP50148 359 aa5.84□□□□□ -1.47
RNU4-39P-201ENST00000362455 MC1RQ01726 317 aa5.84□□□□□ -1.47
RNU4-39P-201ENST00000362455 GHRHRQ02643 423 aa5.84□□□□□ -1.47
RNU4-39P-201ENST00000362455 NUCB1Q02818 461 aa5.84□□□□□ -1.47
RNU4-39P-201ENST00000362455 CREB5Q02930 508 aa5.84□□□□□ -1.47
RNU4-39P-201ENST00000362455 FOXF2Q12947 444 aa5.84□□□□□ -1.47
RNU4-39P-201ENST00000362455 NCEH1Q6PIU2 408 aa5.84□□□□□ -1.47
RNU4-39P-201ENST00000362455 G2E3Q7L622 706 aa5.84□□□□□ -1.47
RNU4-39P-201ENST00000362455 RPAP2Q8IXW5 612 aaPredicted RBP5.84□□□□□ -1.47
RNU4-39P-201ENST00000362455 KIAA2013Q8IYS2 634 aa5.84□□□□□ -1.47
RNU4-39P-201ENST00000362455 CADM3Q8N126 398 aa5.84□□□□□ -1.47
RNU4-39P-201ENST00000362455 DPP10Q8N608 796 aa5.84□□□□□ -1.47
RNU4-39P-201ENST00000362455 RASSF8Q8NHQ8 419 aa5.84□□□□□ -1.47
RNU4-39P-201ENST00000362455 DPF1Q92782 380 aa5.84□□□□□ -1.47
RNU4-39P-201ENST00000362455 EME1Q96AY2 570 aa5.84□□□□□ -1.47
RNU4-39P-201ENST00000362455 FAM149B1Q96BN6 582 aa5.84□□□□□ -1.47
RNU4-39P-201ENST00000362455 PRMT6Q96LA8 375 aaPredicted RBP5.84□□□□□ -1.47
RNU4-39P-201ENST00000362455 H2AFJQ9BTM1 129 aa5.84□□□□□ -1.47
RNU4-39P-201ENST00000362455 DEFB129Q9H1M3 183 aa5.84□□□□□ -1.47
RNU4-39P-201ENST00000362455 WDR6Q9NNW5 1121 aaKnown RBP5.84□□□□□ -1.47
RNU4-39P-201ENST00000362455 SMYD2Q9NRG4 433 aa5.84□□□□□ -1.47
RNU4-39P-201ENST00000362455 TMEM45AQ9NWC5 275 aa5.84□□□□□ -1.47
RNU4-39P-201ENST00000362455 CWC25Q9NXE8 425 aaPredicted RBP5.84□□□□□ -1.47
RNU4-39P-201ENST00000362455 ADAM18Q9Y3Q7 739 aa5.84□□□□□ -1.47
RNU4-39P-201ENST00000362455 TRIM17Q9Y577 477 aa5.84□□□□□ -1.47
RNU4-39P-201ENST00000362455 RPS6KL1Q9Y6S9 549 aa5.84□□□□□ -1.47
RNU4-39P-201ENST00000362455 POLR2AP24928 1970 aaKnown RBP5.84□□□□□ -1.48
RNU4-39P-201ENST00000362455 SCN9AQ15858 1988 aa5.84□□□□□ -1.48
RNU4-39P-201ENST00000362455 CENPFP49454 3210 aa5.84□□□□□ -1.48
RNU4-39P-201ENST00000362455 TAF1P21675 1872 aa5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 TTC36A6NLP5 189 aa5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 AGAP14A8MT82 685 aa5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 EIF3CLB5ME19 914 aaKnown RBP5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 VILLO15195 856 aa5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 KIF1CO43896 1103 aaKnown RBP5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 PAGE4O60829 102 aa5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 NUDT3O95989 172 aa5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 IRF1P10914 325 aa5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 UNGP13051 313 aaPredicted RBP5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 RARGP13631 454 aa5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 PTPN2P17706 415 aa5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 ATP5F1P24539 256 aaPredicted RBP5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 MPGP29372 298 aa5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 ACTN2P35609 894 aa5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 PPARGP37231 505 aaPredicted RBP5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 RAD52P43351 418 aa5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 CENPAP49450 140 aa5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 CLDN2P57739 230 aa5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 NLRP5P59047 1200 aa5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 RPS13P62277 151 aaKnown RBP5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 CEBPZQ03701 1054 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms