RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 LGR4Q9BXB1 951 aa27.59■■■□□ 2.01
ATPAF1-201ENST00000329231 TEX101Q9BY14 249 aa27.59■■■□□ 2.01
ATPAF1-201ENST00000329231 GOLGA6AQ9NYA3 693 aa27.59■■■□□ 2.01
ATPAF1-201ENST00000329231 U3KQA8 63 aa27.59■■■□□ 2.01
ATPAF1-201ENST00000329231 A0A0U1RQS6 177 aa27.58■■■□□ 2.01
ATPAF1-201ENST00000329231 CCDC66A2RUB6 948 aa27.58■■■□□ 2.01
ATPAF1-201ENST00000329231 ANKRD66B4E2M5 251 aa27.58■■■□□ 2.01
ATPAF1-201ENST00000329231 MYF5P13349 255 aa27.58■■■□□ 2.01
ATPAF1-201ENST00000329231 RPIAP49247 311 aa27.58■■■□□ 2.01
ATPAF1-201ENST00000329231 NR0B2Q15466 257 aa27.58■■■□□ 2.01
ATPAF1-201ENST00000329231 RAET1GQ6H3X3 334 aa27.58■■■□□ 2.01
ATPAF1-201ENST00000329231 HEATR4Q86WZ0 1026 aa27.58■■■□□ 2.01
ATPAF1-201ENST00000329231 GKN2Q86XP6 184 aa27.58■■■□□ 2.01
ATPAF1-201ENST00000329231 MARCH9Q86YJ5 346 aa27.58■■■□□ 2.01
ATPAF1-201ENST00000329231 RAVER1Q8IY67 606 aaKnown RBP27.58■■■□□ 2.01
ATPAF1-201ENST00000329231 ZCCHC14Q8WYQ9 949 aaKnown RBP27.58■■■□□ 2.01
ATPAF1-201ENST00000329231 OR1E3Q8WZA6 343 aa27.58■■■□□ 2.01
ATPAF1-201ENST00000329231 MLPHQ9BV36 600 aaPredicted RBP27.58■■■□□ 2.01
ATPAF1-201ENST00000329231 GRPEL1Q9HAV7 217 aa27.58■■■□□ 2.01
ATPAF1-201ENST00000329231 GLOD4Q9HC38 313 aa27.58■■■□□ 2.01
ATPAF1-201ENST00000329231 FGF22Q9HCT0 170 aa27.58■■■□□ 2.01
ATPAF1-201ENST00000329231 PLXNB3Q9ULL4 1909 aa27.58■■■□□ 2.01
ATPAF1-201ENST00000329231 GOLGA6L3A6NEY3 463 aa27.57■■■□□ 2
ATPAF1-201ENST00000329231 PTPN3P26045 913 aa27.57■■■□□ 2
ATPAF1-201ENST00000329231 CTNNA2P26232 953 aa27.57■■■□□ 2
ATPAF1-201ENST00000329231 STC1P52823 247 aa27.57■■■□□ 2
ATPAF1-201ENST00000329231 KIF5AQ12840 1032 aa27.57■■■□□ 2
ATPAF1-201ENST00000329231 SLC14A2Q15849 920 aa27.57■■■□□ 2
ATPAF1-201ENST00000329231 QPCTQ16769 361 aa27.57■■■□□ 2
ATPAF1-201ENST00000329231 BBS12Q6ZW61 710 aa27.57■■■□□ 2
ATPAF1-201ENST00000329231 ZNF765Q7L2R6 523 aa27.57■■■□□ 2
ATPAF1-201ENST00000329231 ZC3H18Q86VM9 953 aaKnown RBP27.57■■■□□ 2
ATPAF1-201ENST00000329231 NLRP8Q86W28 1048 aa27.57■■■□□ 2
ATPAF1-201ENST00000329231 NRSN1Q8IZ57 195 aa27.57■■■□□ 2
ATPAF1-201ENST00000329231 AP2M1Q96CW1 435 aa27.57■■■□□ 2
ATPAF1-201ENST00000329231 TEKT5Q96M29 485 aa27.57■■■□□ 2
ATPAF1-201ENST00000329231 HEMGNQ9BXL5 484 aa27.57■■■□□ 2
ATPAF1-201ENST00000329231 EFR3BQ9Y2G0 817 aa27.57■■■□□ 2
ATPAF1-201ENST00000329231 GOLGA4Q13439 2230 aaKnown RBP27.57■■■□□ 2
ATPAF1-201ENST00000329231 C1orf232A0A0U1RR37 186 aa27.56■■■□□ 2
ATPAF1-201ENST00000329231 CLDN7O95471 211 aa27.56■■■□□ 2
ATPAF1-201ENST00000329231 PYGLP06737 847 aa27.56■■■□□ 2
ATPAF1-201ENST00000329231 CELA2BP08218 269 aaPredicted RBP27.56■■■□□ 2
ATPAF1-201ENST00000329231 GPR1P46091 355 aa27.56■■■□□ 2
ATPAF1-201ENST00000329231 CLDN6P56747 220 aa27.56■■■□□ 2
ATPAF1-201ENST00000329231 RWDD2BP57060 319 aa27.56■■■□□ 2
ATPAF1-201ENST00000329231 CDK3Q00526 305 aa27.56■■■□□ 2
ATPAF1-201ENST00000329231 INSM1Q01101 510 aaPredicted RBP27.56■■■□□ 2
ATPAF1-201ENST00000329231 CDKN3Q16667 212 aa27.56■■■□□ 2
ATPAF1-201ENST00000329231 CCDC181Q5TID7 509 aa27.56■■■□□ 2
ATPAF1-201ENST00000329231 NYAP1Q6ZVC0 841 aa27.56■■■□□ 2
ATPAF1-201ENST00000329231 CACTIN-AS1Q8N1I8 211 aa27.56■■■□□ 2
ATPAF1-201ENST00000329231 PDCD7Q8N8D1 485 aaKnown RBP27.56■■■□□ 2
ATPAF1-201ENST00000329231 LRRC57Q8N9N7 239 aa27.56■■■□□ 2
ATPAF1-201ENST00000329231 IFI44Q8TCB0 444 aa27.56■■■□□ 2
ATPAF1-201ENST00000329231 HAUS1Q96CS2 278 aa27.56■■■□□ 2
ATPAF1-201ENST00000329231 ABCG8Q9H221 673 aa27.56■■■□□ 2
ATPAF1-201ENST00000329231 MRPL40Q9NQ50 206 aaKnown RBP27.56■■■□□ 2
ATPAF1-201ENST00000329231 CD84Q9UIB8 345 aa27.56■■■□□ 2
ATPAF1-201ENST00000329231 MOSPD1Q9UJG1 213 aa27.56■■■□□ 2
ATPAF1-201ENST00000329231 EPG5Q9HCE0 2579 aa27.55■■■□□ 2
ATPAF1-201ENST00000329231 GRID2IPA4D2P6 1211 aa27.55■■■□□ 2
ATPAF1-201ENST00000329231 HACD1B0YJ81 288 aa27.55■■■□□ 2
ATPAF1-201ENST00000329231 APOC4-APOC2K7ER74 178 aa27.55■■■□□ 2
ATPAF1-201ENST00000329231 APOC2P02655 101 aa27.55■■■□□ 2
ATPAF1-201ENST00000329231 CETN2P41208 172 aa27.55■■■□□ 2
ATPAF1-201ENST00000329231 CAMK2BQ13554 666 aa27.55■■■□□ 2
ATPAF1-201ENST00000329231 FAM182AQ5T1J6 154 aa27.55■■■□□ 2
ATPAF1-201ENST00000329231 KCTD16Q68DU8 428 aa27.55■■■□□ 2
ATPAF1-201ENST00000329231 RFLNAQ6ZTI6 216 aa27.55■■■□□ 2
ATPAF1-201ENST00000329231 SYCE1Q8N0S2 351 aa27.55■■■□□ 2
ATPAF1-201ENST00000329231 CCHCR1Q8TD31 782 aa27.55■■■□□ 2
ATPAF1-201ENST00000329231 TADA1Q96BN2 335 aa27.55■■■□□ 2
ATPAF1-201ENST00000329231 VAT1Q99536 393 aa27.55■■■□□ 2
ATPAF1-201ENST00000329231 DESI2Q9BSY9 194 aa27.55■■■□□ 2
ATPAF1-201ENST00000329231 ABCG4Q9H172 646 aa27.55■■■□□ 2
ATPAF1-201ENST00000329231 CYP4F12Q9HCS2 524 aa27.55■■■□□ 2
ATPAF1-201ENST00000329231 ZMIZ1Q9ULJ6 1067 aa27.55■■■□□ 2
ATPAF1-201ENST00000329231 CLCA2Q9UQC9 943 aa27.55■■■□□ 2
ATPAF1-201ENST00000329231 FRYQ5TBA9 3013 aa27.54■■■□□ 2
ATPAF1-201ENST00000329231 PRSS38A1L453 326 aa27.54■■■□□ 2
ATPAF1-201ENST00000329231 MACROD2A1Z1Q3 448 aa27.54■■■□□ 2
ATPAF1-201ENST00000329231 CPED1A4D0V7 1026 aa27.54■■■□□ 2
ATPAF1-201ENST00000329231 EME2A4GXA9 379 aaPredicted RBP27.54■■■□□ 2
ATPAF1-201ENST00000329231 OPA1O60313 960 aa27.54■■■□□ 2
ATPAF1-201ENST00000329231 PTPN7P35236 360 aa27.54■■■□□ 2
ATPAF1-201ENST00000329231 KNTC1P50748 2209 aa27.54■■■□□ 2
ATPAF1-201ENST00000329231 CDK18Q07002 472 aa27.54■■■□□ 2
ATPAF1-201ENST00000329231 WASHC5Q12768 1159 aa27.54■■■□□ 2
ATPAF1-201ENST00000329231 TARDBPQ13148 414 aaKnown RBP eCLIP27.54■■■□□ 2
ATPAF1-201ENST00000329231 XRCC4Q13426 336 aa27.54■■■□□ 2
ATPAF1-201ENST00000329231 GALNT3Q14435 633 aa27.54■■■□□ 2
ATPAF1-201ENST00000329231 TCEA2Q15560 299 aa27.54■■■□□ 2
ATPAF1-201ENST00000329231 SLC35F3Q8IY50 421 aa27.54■■■□□ 2
ATPAF1-201ENST00000329231 NAT6Q93015 286 aa27.54■■■□□ 2
ATPAF1-201ENST00000329231 QKIQ96PU8 341 aaKnown RBP eCLIP27.54■■■□□ 2
ATPAF1-201ENST00000329231 TRIB3Q96RU7 358 aa27.54■■■□□ 2
ATPAF1-201ENST00000329231 CCDC86Q9H6F5 360 aaKnown RBP27.54■■■□□ 2
ATPAF1-201ENST00000329231 AMFRQ9UKV5 643 aa27.54■■■□□ 2
ATPAF1-201ENST00000329231 GPR34Q9UPC5 381 aa27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms