RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 TLR9Q9NR96 1032 aa17.7■□□□□ 0.42
CDKN1B-201ENST00000228872 TMPRSS4Q9NRS4 437 aa17.7■□□□□ 0.42
CDKN1B-201ENST00000228872 SETD4Q9NVD3 440 aa17.7■□□□□ 0.42
CDKN1B-201ENST00000228872 FAM95CA0A1B0GW59 222 aa17.69■□□□□ 0.42
CDKN1B-201ENST00000228872 FXYD1O00168 92 aa17.69■□□□□ 0.42
CDKN1B-201ENST00000228872 ALBP02768 609 aa17.69■□□□□ 0.42
CDKN1B-201ENST00000228872 GSTM2P28161 218 aa17.69■□□□□ 0.42
CDKN1B-201ENST00000228872 TM4SF4P48230 202 aa17.69■□□□□ 0.42
CDKN1B-201ENST00000228872 YBX1P67809 324 aaKnown RBP17.69■□□□□ 0.42
CDKN1B-201ENST00000228872 CAPRIN1Q14444 709 aaKnown RBP17.69■□□□□ 0.42
CDKN1B-201ENST00000228872 CBX2Q14781 532 aaPredicted RBP17.69■□□□□ 0.42
CDKN1B-201ENST00000228872 CYP2U1Q7Z449 544 aa17.69■□□□□ 0.42
CDKN1B-201ENST00000228872 FUNDC2Q9BWH2 189 aa17.69■□□□□ 0.42
CDKN1B-201ENST00000228872 GMIPQ9P107 970 aa17.69■□□□□ 0.42
CDKN1B-201ENST00000228872 INPP4BO15327 924 aa17.69■□□□□ 0.42
CDKN1B-201ENST00000228872 ZBTB24O43167 697 aaPredicted RBP17.69■□□□□ 0.42
CDKN1B-201ENST00000228872 MSI1O43347 362 aaKnown RBP17.69■□□□□ 0.42
CDKN1B-201ENST00000228872 STAG3L1P0CL83 205 aa17.69■□□□□ 0.42
CDKN1B-201ENST00000228872 KCNA5P22460 613 aa17.69■□□□□ 0.42
CDKN1B-201ENST00000228872 NR4A1P22736 598 aa17.69■□□□□ 0.42
CDKN1B-201ENST00000228872 TRIM32Q13049 653 aa17.69■□□□□ 0.42
CDKN1B-201ENST00000228872 DNASE1L3Q13609 305 aa17.69■□□□□ 0.42
CDKN1B-201ENST00000228872 SNX17Q15036 470 aa17.69■□□□□ 0.42
CDKN1B-201ENST00000228872 PAFAH1B3Q15102 231 aaKnown RBP17.69■□□□□ 0.42
CDKN1B-201ENST00000228872 IQSEC1Q6DN90 963 aa17.69■□□□□ 0.42
CDKN1B-201ENST00000228872 TBPL2Q6SJ96 375 aa17.69■□□□□ 0.42
CDKN1B-201ENST00000228872 CRTC3Q6UUV7 619 aa17.69■□□□□ 0.42
CDKN1B-201ENST00000228872 CYHR1Q6ZMK1 362 aa17.69■□□□□ 0.42
CDKN1B-201ENST00000228872 SLC16A12Q6ZSM3 486 aa17.69■□□□□ 0.42
CDKN1B-201ENST00000228872 LARP4Q71RC2 724 aaKnown RBP eCLIP17.69■□□□□ 0.42
CDKN1B-201ENST00000228872 TFAP2DQ7Z6R9 452 aa17.69■□□□□ 0.42
CDKN1B-201ENST00000228872 DSG4Q86SJ6 1040 aa17.69■□□□□ 0.42
CDKN1B-201ENST00000228872 MINDY1Q8N5J2 469 aa17.69■□□□□ 0.42
CDKN1B-201ENST00000228872 SGCDQ92629 289 aa17.69■□□□□ 0.42
CDKN1B-201ENST00000228872 FZD8Q9H461 694 aa17.69■□□□□ 0.42
CDKN1B-201ENST00000228872 WARS2Q9UGM6 360 aaKnown RBP17.69■□□□□ 0.42
CDKN1B-201ENST00000228872 ZNF639Q9UID6 485 aa17.69■□□□□ 0.42
CDKN1B-201ENST00000228872 ZSWIM8A7E2V4 1837 aa17.69■□□□□ 0.42
CDKN1B-201ENST00000228872 TRIP11Q15643 1979 aa17.68■□□□□ 0.42
CDKN1B-201ENST00000228872 A0A0J9YYE9 177 aa17.68■□□□□ 0.42
CDKN1B-201ENST00000228872 ATP6AP2A0A1C7CYW4 349 aa17.68■□□□□ 0.42
CDKN1B-201ENST00000228872 TCRBV5S2A0A599 114 aa17.68■□□□□ 0.42
CDKN1B-201ENST00000228872 HBP1O60381 514 aa17.68■□□□□ 0.42
CDKN1B-201ENST00000228872 ATP6AP2O75787 350 aa17.68■□□□□ 0.42
CDKN1B-201ENST00000228872 ALDOCP09972 364 aaKnown RBP17.68■□□□□ 0.42
CDKN1B-201ENST00000228872 MTHFD1P11586 935 aaKnown RBP17.68■□□□□ 0.42
CDKN1B-201ENST00000228872 SNX16P57768 344 aa17.68■□□□□ 0.42
CDKN1B-201ENST00000228872 DUSP28Q4G0W2 176 aa17.68■□□□□ 0.42
CDKN1B-201ENST00000228872 ATP13A3Q9H7F0 1226 aa17.68■□□□□ 0.42
CDKN1B-201ENST00000228872 ERAP1Q9NZ08 941 aa17.68■□□□□ 0.42
CDKN1B-201ENST00000228872 NDUFAF1Q9Y375 327 aa17.68■□□□□ 0.42
CDKN1B-201ENST00000228872 GMNNO75496 209 aa17.68■□□□□ 0.42
CDKN1B-201ENST00000228872 LDLRP01130 860 aa17.68■□□□□ 0.42
CDKN1B-201ENST00000228872 CD68P34810 354 aaPredicted RBP17.68■□□□□ 0.42
CDKN1B-201ENST00000228872 CLCN3P51790 818 aa17.68■□□□□ 0.42
CDKN1B-201ENST00000228872 TPTEP56180 551 aa17.68■□□□□ 0.42
CDKN1B-201ENST00000228872 NDUFA5Q16718 116 aa17.68■□□□□ 0.42
CDKN1B-201ENST00000228872 STRADAQ7RTN6 431 aa17.68■□□□□ 0.42
CDKN1B-201ENST00000228872 DENND6AQ8IWF6 608 aa17.68■□□□□ 0.42
CDKN1B-201ENST00000228872 SPARTQ8N0X7 666 aa17.68■□□□□ 0.42
CDKN1B-201ENST00000228872 ZFP90Q8TF47 636 aa17.68■□□□□ 0.42
CDKN1B-201ENST00000228872 RPL10LQ96L21 214 aaKnown RBP17.68■□□□□ 0.42
CDKN1B-201ENST00000228872 ING2Q9H160 280 aa17.68■□□□□ 0.42
CDKN1B-201ENST00000228872 MRM3Q9HC36 420 aaKnown RBP17.68■□□□□ 0.42
CDKN1B-201ENST00000228872 MAGEE1Q9HCI5 957 aa17.68■□□□□ 0.42
CDKN1B-201ENST00000228872 MTRRQ9UBK8 725 aa17.68■□□□□ 0.42
CDKN1B-201ENST00000228872 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.67■□□□□ 0.42
CDKN1B-201ENST00000228872 TMEM88BA6NKF7 163 aa17.67■□□□□ 0.42
CDKN1B-201ENST00000228872 ERI2A8K979 691 aaKnown RBP17.67■□□□□ 0.42
CDKN1B-201ENST00000228872 NDUFB5O43674 189 aa17.67■□□□□ 0.42
CDKN1B-201ENST00000228872 CAPN3P20807 821 aa17.67■□□□□ 0.42
CDKN1B-201ENST00000228872 TCEA1P23193 301 aaKnown RBP17.67■□□□□ 0.42
CDKN1B-201ENST00000228872 SLC6A2P23975 617 aa17.67■□□□□ 0.42
CDKN1B-201ENST00000228872 TKTP29401 623 aaKnown RBP17.67■□□□□ 0.42
CDKN1B-201ENST00000228872 ZIK1Q3SY52 487 aaPredicted RBP17.67■□□□□ 0.42
CDKN1B-201ENST00000228872 VPS26BQ4G0F5 336 aa17.67■□□□□ 0.42
CDKN1B-201ENST00000228872 GJC2Q5T442 439 aaPredicted RBP17.67■□□□□ 0.42
CDKN1B-201ENST00000228872 LINC00523Q86TU6 105 aa17.67■□□□□ 0.42
CDKN1B-201ENST00000228872 TTC39CQ8N584 583 aa17.67■□□□□ 0.42
CDKN1B-201ENST00000228872 LEMD2Q8NC56 503 aa17.67■□□□□ 0.42
CDKN1B-201ENST00000228872 PAPD5Q8NDF8 572 aaKnown RBP17.67■□□□□ 0.42
CDKN1B-201ENST00000228872 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.67■□□□□ 0.422e-7■■■■■ 62.8
CDKN1B-201ENST00000228872 SCUBE2Q9NQ36 999 aa17.67■□□□□ 0.42
CDKN1B-201ENST00000228872 ANAPC2Q9UJX6 822 aa17.67■□□□□ 0.42
CDKN1B-201ENST00000228872 ABT1Q9ULW3 272 aaKnown RBP17.67■□□□□ 0.42
CDKN1B-201ENST00000228872 TNFSF13BQ9Y275 285 aa17.67■□□□□ 0.42
CDKN1B-201ENST00000228872 A8MT66 165 aa17.67■□□□□ 0.42
CDKN1B-201ENST00000228872 A8MU76 341 aa17.67■□□□□ 0.42
CDKN1B-201ENST00000228872 MT-ND1P03886 318 aa17.67■□□□□ 0.42
CDKN1B-201ENST00000228872 LGALS2P05162 132 aa17.67■□□□□ 0.42
CDKN1B-201ENST00000228872 MYL3P08590 195 aa17.67■□□□□ 0.42
CDKN1B-201ENST00000228872 HOXD8P13378 290 aaPredicted RBP17.67■□□□□ 0.42
CDKN1B-201ENST00000228872 LCP1P13796 627 aa17.67■□□□□ 0.42
CDKN1B-201ENST00000228872 SMPD1P17405 629 aa17.67■□□□□ 0.42
CDKN1B-201ENST00000228872 CRHBPP24387 322 aa17.67■□□□□ 0.42
CDKN1B-201ENST00000228872 TAS2R39P59534 338 aa17.67■□□□□ 0.42
CDKN1B-201ENST00000228872 CTBP1Q13363 440 aa17.67■□□□□ 0.42
CDKN1B-201ENST00000228872 MAPRE1Q15691 268 aaKnown RBP17.67■□□□□ 0.42
CDKN1B-201ENST00000228872 UGP2Q16851 508 aa17.67■□□□□ 0.42
CDKN1B-201ENST00000228872 KIF19Q2TAC6 998 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms