RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 RPL7AP62424 266 aaKnown RBP21.07■□□□□ 0.96
CHKA-206ENST00000531341 ACOX1Q15067 660 aa21.07■□□□□ 0.96
CHKA-206ENST00000531341 ARHGAP36Q6ZRI8 547 aa21.07■□□□□ 0.96
CHKA-206ENST00000531341 NAGSQ8N159 534 aa21.07■□□□□ 0.96
CHKA-206ENST00000531341 IL22RA1Q8N6P7 574 aa21.07■□□□□ 0.96
CHKA-206ENST00000531341 ART4Q93070 314 aa21.07■□□□□ 0.96
CHKA-206ENST00000531341 COQ10AQ96MF6 247 aa21.07■□□□□ 0.96
CHKA-206ENST00000531341 NLRC4Q9NPP4 1024 aa21.07■□□□□ 0.96
CHKA-206ENST00000531341 TAB2Q9NYJ8 693 aa21.07■□□□□ 0.96
CHKA-206ENST00000531341 PLEKHM1Q9Y4G2 1056 aa21.07■□□□□ 0.96
CHKA-206ENST00000531341 PALMO75781 387 aa21.06■□□□□ 0.96
CHKA-206ENST00000531341 CSF2RBP32927 897 aa21.06■□□□□ 0.96
CHKA-206ENST00000531341 SOX5P35711 763 aa21.06■□□□□ 0.96
CHKA-206ENST00000531341 POLD2P49005 469 aa21.06■□□□□ 0.96
CHKA-206ENST00000531341 ATP1A2P50993 1020 aa21.06■□□□□ 0.96
CHKA-206ENST00000531341 ZNF143P52747 638 aaPredicted RBP21.06■□□□□ 0.96
CHKA-206ENST00000531341 NDST2P52849 883 aa21.06■□□□□ 0.96
CHKA-206ENST00000531341 POLR2FP61218 127 aaKnown RBP21.06■□□□□ 0.96
CHKA-206ENST00000531341 FOXK1P85037 733 aa21.06■□□□□ 0.96
CHKA-206ENST00000531341 BCL2L1Q07817 233 aa21.06■□□□□ 0.96
CHKA-206ENST00000531341 CA9Q16790 459 aa21.06■□□□□ 0.96
CHKA-206ENST00000531341 CLEC16AQ2KHT3 1053 aa21.06■□□□□ 0.96
CHKA-206ENST00000531341 SLC30A9Q6PML9 568 aa21.06■□□□□ 0.96
CHKA-206ENST00000531341 C3orf20Q8ND61 904 aa21.06■□□□□ 0.96
CHKA-206ENST00000531341 B4GALT6Q9UBX8 382 aa21.06■□□□□ 0.96
CHKA-206ENST00000531341 SEPT3Q9UH03 358 aa21.06■□□□□ 0.96
CHKA-206ENST00000531341 SUFUQ9UMX1 484 aa21.06■□□□□ 0.96
CHKA-206ENST00000531341 ARHGEF17Q96PE2 2063 aaPredicted RBP21.06■□□□□ 0.96
CHKA-206ENST00000531341 NKX2-8O15522 239 aa21.05■□□□□ 0.96
CHKA-206ENST00000531341 MYCLP1P12525 358 aaPredicted RBP21.05■□□□□ 0.96
CHKA-206ENST00000531341 NSFP46459 744 aaKnown RBP21.05■□□□□ 0.96
CHKA-206ENST00000531341 GNPDA1P46926 289 aa21.05■□□□□ 0.96
CHKA-206ENST00000531341 OGDHQ02218 1023 aa21.05■□□□□ 0.96
CHKA-206ENST00000531341 PTPRRQ15256 657 aa21.05■□□□□ 0.96
CHKA-206ENST00000531341 TCP11X2Q5H9J9 407 aa21.05■□□□□ 0.96
CHKA-206ENST00000531341 HEATR4Q86WZ0 1026 aa21.05■□□□□ 0.96
CHKA-206ENST00000531341 PHF13Q86YI8 300 aaPredicted RBP21.05■□□□□ 0.96
CHKA-206ENST00000531341 ARHGAP12Q8IWW6 846 aa21.05■□□□□ 0.96
CHKA-206ENST00000531341 TP53INP2Q8IXH6 220 aa21.05■□□□□ 0.96
CHKA-206ENST00000531341 CACNA2D3Q8IZS8 1091 aa21.05■□□□□ 0.96
CHKA-206ENST00000531341 MCEEQ96PE7 176 aa21.05■□□□□ 0.96
CHKA-206ENST00000531341 TEX101Q9BY14 249 aa21.05■□□□□ 0.96
CHKA-206ENST00000531341 FRMD8Q9BZ67 464 aaPredicted RBP21.05■□□□□ 0.96
CHKA-206ENST00000531341 CDH19Q9H159 772 aa21.05■□□□□ 0.96
CHKA-206ENST00000531341 VPS16Q9H269 839 aa21.05■□□□□ 0.96
CHKA-206ENST00000531341 ZNF71Q9NQZ8 489 aaPredicted RBP21.05■□□□□ 0.96
CHKA-206ENST00000531341 FAM207AQ9NSI2 230 aaPredicted RBP21.05■□□□□ 0.96
CHKA-206ENST00000531341 IGHV1OR21-1A0A087WYE8 117 aa21.04■□□□□ 0.96
CHKA-206ENST00000531341 FGF10O15520 208 aaPredicted RBP21.04■□□□□ 0.96
CHKA-206ENST00000531341 DUX1O43812 170 aa21.04■□□□□ 0.96
CHKA-206ENST00000531341 RAD1O60671 282 aa21.04■□□□□ 0.96
CHKA-206ENST00000531341 THRAP10827 490 aa21.04■□□□□ 0.96
CHKA-206ENST00000531341 TPI1P60174 286 aa21.04■□□□□ 0.96
CHKA-206ENST00000531341 CTBSQ01459 385 aa21.04■□□□□ 0.96
CHKA-206ENST00000531341 CNGA3Q16281 694 aa21.04■□□□□ 0.96
CHKA-206ENST00000531341 TSR1Q2NL82 804 aaKnown RBP21.04■□□□□ 0.96
CHKA-206ENST00000531341 PPP1R15BQ5SWA1 713 aa21.04■□□□□ 0.96
CHKA-206ENST00000531341 DENND2CQ68D51 928 aa21.04■□□□□ 0.96
CHKA-206ENST00000531341 TRIM72Q6ZMU5 477 aa21.04■□□□□ 0.96
CHKA-206ENST00000531341 MON1BQ7L1V2 547 aa21.04■□□□□ 0.96
CHKA-206ENST00000531341 OR4D9Q8NGE8 314 aa21.04■□□□□ 0.96
CHKA-206ENST00000531341 NUS1Q96E22 293 aa21.04■□□□□ 0.96
CHKA-206ENST00000531341 GSDMCQ9BYG8 508 aa21.04■□□□□ 0.96
CHKA-206ENST00000531341 SLC39A1Q9NY26 324 aa21.04■□□□□ 0.96
CHKA-206ENST00000531341 LRRK2Q5S007 2527 aa21.04■□□□□ 0.96
CHKA-206ENST00000531341 CLEC18AA5D8T8 446 aa21.03■□□□□ 0.96
CHKA-206ENST00000531341 GPR3P46089 330 aa21.03■□□□□ 0.96
CHKA-206ENST00000531341 CCR10P46092 362 aa21.03■□□□□ 0.96
CHKA-206ENST00000531341 SCNN1BP51168 640 aa21.03■□□□□ 0.96
CHKA-206ENST00000531341 ILF3Q12906 894 aaKnown RBP eCLIP21.03■□□□□ 0.965e-8■■■□□ 15.1
CHKA-206ENST00000531341 TRA2AQ13595 282 aaKnown RBP eCLIP21.03■□□□□ 0.96
CHKA-206ENST00000531341 CLPPQ16740 277 aaPredicted RBP21.03■□□□□ 0.96
CHKA-206ENST00000531341 ANKS6Q68DC2 871 aa21.03■□□□□ 0.96
CHKA-206ENST00000531341 CLEC18BQ6UXF7 455 aa21.03■□□□□ 0.96
CHKA-206ENST00000531341 CBARPQ8N350 705 aaPredicted RBP21.03■□□□□ 0.96
CHKA-206ENST00000531341 CLEC18CQ8NCF0 446 aa21.03■□□□□ 0.96
CHKA-206ENST00000531341 AGBL5Q8NDL9 886 aa21.03■□□□□ 0.96
CHKA-206ENST00000531341 DDA1Q9BW61 102 aa21.03■□□□□ 0.96
CHKA-206ENST00000531341 CINPQ9BW66 212 aaPredicted RBP21.03■□□□□ 0.96
CHKA-206ENST00000531341 TRNAU1APQ9NX07 287 aaKnown RBP21.03■□□□□ 0.96
CHKA-206ENST00000531341 A0A0U1RQS6 177 aa21.02■□□□□ 0.96
CHKA-206ENST00000531341 EFCAB7A8K855 629 aa21.02■□□□□ 0.96
CHKA-206ENST00000531341 PDE2AO00408 941 aaPredicted RBP21.02■□□□□ 0.96
CHKA-206ENST00000531341 CALB1P05937 261 aa21.02■□□□□ 0.96
CHKA-206ENST00000531341 CR2P20023 1033 aa21.02■□□□□ 0.96
CHKA-206ENST00000531341 ERCC5P28715 1186 aaPredicted RBP21.02■□□□□ 0.96
CHKA-206ENST00000531341 CSTF2P33240 577 aaKnown RBP eCLIP21.02■□□□□ 0.963e-7■■□□□ 11.5
CHKA-206ENST00000531341 ADCY8P40145 1251 aa21.02■□□□□ 0.96
CHKA-206ENST00000531341 ETV3P41162 512 aa21.02■□□□□ 0.96
CHKA-206ENST00000531341 CASRP41180 1078 aa21.02■□□□□ 0.96
CHKA-206ENST00000531341 POLR2LP62875 67 aaKnown RBP21.02■□□□□ 0.96
CHKA-206ENST00000531341 NSUN2Q08J23 767 aaKnown RBP eCLIP21.02■□□□□ 0.96
CHKA-206ENST00000531341 SQSTM1Q13501 440 aa21.02■□□□□ 0.96
CHKA-206ENST00000531341 DNAJC24Q6P3W2 148 aa21.02■□□□□ 0.96
CHKA-206ENST00000531341 HSD11B1LQ7Z5J1 315 aa21.02■□□□□ 0.96
CHKA-206ENST00000531341 ZNF761Q86XN6 746 aaPredicted RBP21.02■□□□□ 0.96
CHKA-206ENST00000531341 UNC5BQ8IZJ1 945 aa21.02■□□□□ 0.96
CHKA-206ENST00000531341 NPWQ8N729 165 aa21.02■□□□□ 0.96
CHKA-206ENST00000531341 PAF1Q8N7H5 531 aa21.02■□□□□ 0.96
CHKA-206ENST00000531341 BMPERQ8N8U9 685 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms