RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 TBATAQ96M53 351 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 SLC29A1Q99808 456 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 OSBPL11Q9BXB4 747 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 AKTIPQ9H8T0 292 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 RGS18Q9NS28 235 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 LOC285095A0A1B0GVY8 99 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 CCDC160A6NGH7 325 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 DUSP11O75319 330 aaKnown RBP15.26■□□□□ 0.03
DDX56-201ENST00000258772 IGHA2P01877 340 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 SLC2A3P11169 496 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 CD1DP15813 335 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 NR1H2P55055 460 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 TBX4P57082 545 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 STX1BP61266 288 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 SH3BP2P78314 561 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 SLC39A12Q504Y0 691 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 MTX3Q5HYI7 312 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 SDHAF4Q5VUM1 108 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 B3GNT6Q6ZMB0 384 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 DHFR2Q86XF0 187 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 ARRDC2Q8TBH0 407 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 PBXIP1Q96AQ6 731 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 TADA1Q96BN2 335 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 ROPN1LQ96C74 230 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 SLC39A3Q9BRY0 314 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 NOL11Q9H8H0 719 aaKnown RBP15.26■□□□□ 0.03
DDX56-201ENST00000258772 POLR3BQ9NW08 1133 aaPredicted RBP15.26■□□□□ 0.03
DDX56-201ENST00000258772 SCML2Q9UQR0 700 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 TANC1Q9C0D5 1861 aa15.26■□□□□ 0.03
DDX56-201ENST00000258772 SLC4A1P02730 911 aa15.25■□□□□ 0.03
DDX56-201ENST00000258772 ATXN1LP0C7T5 689 aaKnown RBP15.25■□□□□ 0.03
DDX56-201ENST00000258772 FDXRP22570 491 aa15.25■□□□□ 0.03
DDX56-201ENST00000258772 FGFR3P22607 806 aa15.25■□□□□ 0.03
DDX56-201ENST00000258772 CACNB2Q08289 660 aaPredicted RBP15.25■□□□□ 0.03
DDX56-201ENST00000258772 DSC3Q14574 896 aa15.25■□□□□ 0.03
DDX56-201ENST00000258772 HMBOX1Q6NT76 420 aa15.25■□□□□ 0.03
DDX56-201ENST00000258772 MSANTD2Q6P1R3 559 aa15.25■□□□□ 0.03
DDX56-201ENST00000258772 ZNF549Q6P9A3 640 aa15.25■□□□□ 0.03
DDX56-201ENST00000258772 RETREG3Q86VR2 466 aa15.25■□□□□ 0.03
DDX56-201ENST00000258772 ZNF354CQ86Y25 554 aa15.25■□□□□ 0.03
DDX56-201ENST00000258772 PGBD5Q8N414 524 aa15.25■□□□□ 0.03
DDX56-201ENST00000258772 PCYOX1LQ8NBM8 494 aa15.25■□□□□ 0.03
DDX56-201ENST00000258772 HIC2Q96JB3 615 aa15.25■□□□□ 0.03
DDX56-201ENST00000258772 UROC1Q96N76 676 aa15.25■□□□□ 0.03
DDX56-201ENST00000258772 EFHD1Q9BUP0 239 aa15.25■□□□□ 0.03
DDX56-201ENST00000258772 ABI2Q9NYB9 513 aaPredicted RBP15.25■□□□□ 0.03
DDX56-201ENST00000258772 DNAJC15Q9Y5T4 150 aa15.25■□□□□ 0.03
DDX56-201ENST00000258772 ARHGEF37A1IGU5 675 aa15.25■□□□□ 0.03
DDX56-201ENST00000258772 PPP6CO00743 305 aa15.25■□□□□ 0.03
DDX56-201ENST00000258772 CDK14O94921 469 aa15.25■□□□□ 0.03
DDX56-201ENST00000258772 FGF4P08620 206 aa15.25■□□□□ 0.03
DDX56-201ENST00000258772 THPOP40225 353 aa15.25■□□□□ 0.03
DDX56-201ENST00000258772 USP46P62068 366 aa15.25■□□□□ 0.03
DDX56-201ENST00000258772 TIAL1Q01085 375 aaKnown RBP eCLIP15.25■□□□□ 0.03
DDX56-201ENST00000258772 TNK2Q07912 1038 aa15.25■□□□□ 0.03
DDX56-201ENST00000258772 ADRM1Q16186 407 aa15.25■□□□□ 0.03
DDX56-201ENST00000258772 PITRM1Q5JRX3 1037 aa15.25■□□□□ 0.03
DDX56-201ENST00000258772 CIB1Q99828 191 aa15.25■□□□□ 0.03
DDX56-201ENST00000258772 ADAM2Q99965 735 aa15.25■□□□□ 0.03
DDX56-201ENST00000258772 GMPR2Q9P2T1 348 aaKnown RBP15.25■□□□□ 0.03
DDX56-201ENST00000258772 DMTF1Q9Y222 760 aa15.25■□□□□ 0.03
DDX56-201ENST00000258772 A0A0J9YYE9 177 aa15.24■□□□□ 0.03
DDX56-201ENST00000258772 A0A1B0GTW7 788 aa15.24■□□□□ 0.03
DDX56-201ENST00000258772 TNPO2O14787 897 aaKnown RBP15.24■□□□□ 0.03
DDX56-201ENST00000258772 GLP2RO95838 553 aa15.24■□□□□ 0.03
DDX56-201ENST00000258772 HSPA8P11142 646 aaKnown RBP15.24■□□□□ 0.03
DDX56-201ENST00000258772 BIRC2Q13490 618 aa15.24■□□□□ 0.03
DDX56-201ENST00000258772 CYTH1Q15438 398 aa15.24■□□□□ 0.03
DDX56-201ENST00000258772 DDR2Q16832 855 aa15.24■□□□□ 0.03
DDX56-201ENST00000258772 BORAQ6PGQ7 559 aa15.24■□□□□ 0.03
DDX56-201ENST00000258772 CARM1Q86X55 608 aa15.24■□□□□ 0.03
DDX56-201ENST00000258772 NUP93Q8N1F7 819 aa15.24■□□□□ 0.03
DDX56-201ENST00000258772 RYBPQ8N488 228 aaPredicted RBP15.24■□□□□ 0.03
DDX56-201ENST00000258772 PTGR2Q8N8N7 351 aaPredicted RBP15.24■□□□□ 0.03
DDX56-201ENST00000258772 C2orf69Q8N8R5 385 aa15.24■□□□□ 0.03
DDX56-201ENST00000258772 TRPV1Q8NER1 839 aa15.24■□□□□ 0.03
DDX56-201ENST00000258772 EXT2Q93063 718 aa15.24■□□□□ 0.03
DDX56-201ENST00000258772 PPWD1Q96BP3 646 aaKnown RBP15.24■□□□□ 0.03
DDX56-201ENST00000258772 DTNBP1Q96EV8 351 aa15.24■□□□□ 0.03
DDX56-201ENST00000258772 ASB2Q96Q27 587 aa15.24■□□□□ 0.03
DDX56-201ENST00000258772 MAP10Q9P2G4 905 aa15.24■□□□□ 0.03
DDX56-201ENST00000258772 CNOT6Q9ULM6 557 aaKnown RBP15.24■□□□□ 0.03
DDX56-201ENST00000258772 CENPFP49454 3210 aa15.23■□□□□ 0.03
DDX56-201ENST00000258772 IGLV3-10A0A075B6K4 115 aa15.23■□□□□ 0.03
DDX56-201ENST00000258772 BBIP1A8MTZ0 92 aa15.23■□□□□ 0.03
DDX56-201ENST00000258772 CD3EAPO15446 510 aaKnown RBP15.23■□□□□ 0.03
DDX56-201ENST00000258772 SIX3O95343 332 aaPredicted RBP15.23■□□□□ 0.03
DDX56-201ENST00000258772 STAMBPO95630 424 aa15.23■□□□□ 0.03
DDX56-201ENST00000258772 GOT2P00505 430 aaKnown RBP15.23■□□□□ 0.03
DDX56-201ENST00000258772 ASLP04424 464 aa15.23■□□□□ 0.03
DDX56-201ENST00000258772 ETFBP38117 255 aa15.23■□□□□ 0.03
DDX56-201ENST00000258772 ACVR1Q04771 509 aa15.23■□□□□ 0.03
DDX56-201ENST00000258772 PTPRCAPQ14761 206 aa15.23■□□□□ 0.03
DDX56-201ENST00000258772 KIF19Q2TAC6 998 aa15.23■□□□□ 0.03
DDX56-201ENST00000258772 IRAK1BP1Q5VVH5 260 aa15.23■□□□□ 0.03
DDX56-201ENST00000258772 MYO1HQ8N1T3 1032 aa15.23■□□□□ 0.03
DDX56-201ENST00000258772 OR2T34Q8NGX1 318 aa15.23■□□□□ 0.03
DDX56-201ENST00000258772 OR2T3Q8NH03 318 aa15.23■□□□□ 0.03
DDX56-201ENST00000258772 CANT1Q8WVQ1 401 aa15.23■□□□□ 0.03
DDX56-201ENST00000258772 IGSF8Q969P0 613 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms