RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 GLB1P16278 677 aa11.52□□□□□ -0.57
RAB5C-203ENST00000546881 KELP23276 732 aa11.52□□□□□ -0.57
RAB5C-203ENST00000546881 PSMA2P25787 234 aa11.52□□□□□ -0.57
RAB5C-203ENST00000546881 CCKBRP32239 447 aa11.52□□□□□ -0.57
RAB5C-203ENST00000546881 NDST2P52849 883 aa11.52□□□□□ -0.57
RAB5C-203ENST00000546881 KIAA1024LP59773 190 aa11.52□□□□□ -0.57
RAB5C-203ENST00000546881 OGDHQ02218 1023 aa11.52□□□□□ -0.57
RAB5C-203ENST00000546881 IQCB1Q15051 598 aa11.52□□□□□ -0.57
RAB5C-203ENST00000546881 ACOX1Q15067 660 aa11.52□□□□□ -0.57
RAB5C-203ENST00000546881 CA9Q16790 459 aa11.52□□□□□ -0.57
RAB5C-203ENST00000546881 MAP9Q49MG5 647 aa11.52□□□□□ -0.57
RAB5C-203ENST00000546881 C14orf28Q4W4Y0 310 aa11.52□□□□□ -0.57
RAB5C-203ENST00000546881 CERCAMQ5T4B2 595 aa11.52□□□□□ -0.57
RAB5C-203ENST00000546881 DENND2CQ68D51 928 aa11.52□□□□□ -0.57
RAB5C-203ENST00000546881 ACAD10Q6JQN1 1059 aa11.52□□□□□ -0.57
RAB5C-203ENST00000546881 VASH2Q86V25 355 aa11.52□□□□□ -0.57
RAB5C-203ENST00000546881 GPR156Q8NFN8 814 aa11.52□□□□□ -0.57
RAB5C-203ENST00000546881 CCL4L1Q8NHW4 92 aa11.52□□□□□ -0.57
RAB5C-203ENST00000546881 COL26A1Q96A83 441 aa11.52□□□□□ -0.57
RAB5C-203ENST00000546881 FAM117AQ9C073 453 aa11.52□□□□□ -0.57
RAB5C-203ENST00000546881 TMEM168Q9H0V1 697 aa11.52□□□□□ -0.57
RAB5C-203ENST00000546881 WDR26Q9H7D7 661 aa11.52□□□□□ -0.57
RAB5C-203ENST00000546881 SEPT10Q9P0V9 454 aa11.52□□□□□ -0.57
RAB5C-203ENST00000546881 LRIT1Q9P2V4 623 aa11.52□□□□□ -0.57
RAB5C-203ENST00000546881 DGKBQ9Y6T7 804 aa11.52□□□□□ -0.57
RAB5C-203ENST00000546881 FLNBO75369 2602 aaKnown RBP11.51□□□□□ -0.57
RAB5C-203ENST00000546881 ATMQ13315 3056 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 PRAMEF33A0A0G2JMD5 474 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 GOLGA6CA6NDK9 693 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 GOLGA6BA6NDN3 693 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 ATMINO43313 823 aaPredicted RBP11.51□□□□□ -0.57
RAB5C-203ENST00000546881 NOBOXO60393 691 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 PRAMEF10O60809 474 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 GOLGA6DP0CG33 693 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 LIPCP11150 499 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 HTR7P34969 479 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 SCNN1BP51168 640 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 POLR2LP62875 67 aaKnown RBP11.51□□□□□ -0.57
RAB5C-203ENST00000546881 KCNC4Q03721 635 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 RALGDSQ12967 914 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 BIRC2Q13490 618 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 AGERQ15109 404 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 AMZ1Q400G9 498 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 PPP6R3Q5H9R7 873 aaPredicted RBP11.51□□□□□ -0.57
RAB5C-203ENST00000546881 MANEAQ5SRI9 462 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 PPP1R15BQ5SWA1 713 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 SPECC1LQ69YQ0 1117 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 LIPIQ6XZB0 460 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 ARHGAP36Q6ZRI8 547 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 RFX8Q6ZV50 586 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 DPPA4Q7L190 304 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 SPRED1Q7Z699 444 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 ZFAND4Q86XD8 727 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 MCOLN2Q8IZK6 566 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 EXD3Q8N9H8 876 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 RNF214Q8ND24 703 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 PDCD6IPQ8WUM4 868 aaKnown RBP11.51□□□□□ -0.57
RAB5C-203ENST00000546881 EXTL1Q92935 676 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 USP7Q93009 1102 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 SGF29Q96ES7 293 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 KCTD15Q96SI1 283 aaPredicted RBP11.51□□□□□ -0.57
RAB5C-203ENST00000546881 CMKLR1Q99788 373 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 LGR4Q9BXB1 951 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 TRIM4Q9C037 500 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 HSD3B7Q9H2F3 369 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 CLMPQ9H6B4 373 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 GOLGA6AQ9NYA3 693 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 APPL1Q9UKG1 709 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 PCDHB11Q9Y5F2 797 aa11.51□□□□□ -0.57
RAB5C-203ENST00000546881 TENM4Q6N022 2769 aa11.5□□□□□ -0.57
RAB5C-203ENST00000546881 PRSS38A1L453 326 aa11.5□□□□□ -0.57
RAB5C-203ENST00000546881 TTC24A2A3L6 582 aaPredicted RBP11.5□□□□□ -0.57
RAB5C-203ENST00000546881 CFAP69A5D8W1 941 aa11.5□□□□□ -0.57
RAB5C-203ENST00000546881 NVLO15381 856 aaKnown RBP11.5□□□□□ -0.57
RAB5C-203ENST00000546881 TPM3P06753 285 aa11.5□□□□□ -0.57
RAB5C-203ENST00000546881 FERP16591 822 aa11.5□□□□□ -0.57
RAB5C-203ENST00000546881 ERCC2P18074 760 aa11.5□□□□□ -0.57
RAB5C-203ENST00000546881 TNFAIP3P21580 790 aa11.5□□□□□ -0.57
RAB5C-203ENST00000546881 ALDH4A1P30038 563 aa11.5□□□□□ -0.57
RAB5C-203ENST00000546881 ETV5P41161 510 aa11.5□□□□□ -0.57
RAB5C-203ENST00000546881 CSNK1DP48730 415 aa11.5□□□□□ -0.57
RAB5C-203ENST00000546881 MAZP56270 477 aaKnown RBP11.5□□□□□ -0.57
RAB5C-203ENST00000546881 FANCCQ00597 558 aa11.5□□□□□ -0.57
RAB5C-203ENST00000546881 HLTFQ14527 1009 aaKnown RBP eCLIP11.5□□□□□ -0.57
RAB5C-203ENST00000546881 ERMARDQ5T6L9 678 aa11.5□□□□□ -0.57
RAB5C-203ENST00000546881 PNCKQ6P2M8 343 aa11.5□□□□□ -0.57
RAB5C-203ENST00000546881 OGFOD3Q6PK18 319 aa11.5□□□□□ -0.57
RAB5C-203ENST00000546881 PELI3Q8N2H9 469 aa11.5□□□□□ -0.57
RAB5C-203ENST00000546881 KIAA1524Q8TCG1 905 aa11.5□□□□□ -0.57
RAB5C-203ENST00000546881 JPH3Q8WXH2 748 aaPredicted RBP11.5□□□□□ -0.57
RAB5C-203ENST00000546881 NUS1Q96E22 293 aa11.5□□□□□ -0.57
RAB5C-203ENST00000546881 SNRNP25Q9BV90 132 aaKnown RBP11.5□□□□□ -0.57
RAB5C-203ENST00000546881 SEMA6CQ9H3T2 930 aa11.5□□□□□ -0.57
RAB5C-203ENST00000546881 CARS2Q9HA77 564 aaKnown RBP11.5□□□□□ -0.57
RAB5C-203ENST00000546881 RDH14Q9HBH5 336 aa11.5□□□□□ -0.57
RAB5C-203ENST00000546881 PARVAQ9NVD7 372 aa11.5□□□□□ -0.57
RAB5C-203ENST00000546881 TAS2R14Q9NYV8 317 aa11.5□□□□□ -0.57
RAB5C-203ENST00000546881 FOXJ2Q9P0K8 574 aa11.5□□□□□ -0.57
RAB5C-203ENST00000546881 AKAP7Q9P0M2 348 aaPredicted RBP11.5□□□□□ -0.57
RAB5C-203ENST00000546881 B4GALT6Q9UBX8 382 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms