RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	CDKN2B	P42772	138 aa		12.79	□□□□□ -0.36
FDPS-204	ENST00000461507	RWDD2B	P57060	319 aa		12.79	□□□□□ -0.36
FDPS-204	ENST00000461507	AP1S1	P61966	158 aa		12.79	□□□□□ -0.36
FDPS-204	ENST00000461507	E2F1	Q01094	437 aa		12.79	□□□□□ -0.36
FDPS-204	ENST00000461507	INSM1	Q01101	510 aa	Predicted RBP	12.79	□□□□□ -0.36
FDPS-204	ENST00000461507	SEMG2	Q02383	582 aa		12.79	□□□□□ -0.36
FDPS-204	ENST00000461507	SGCG	Q13326	291 aa		12.79	□□□□□ -0.36
FDPS-204	ENST00000461507	PDK1	Q15118	436 aa		12.79	□□□□□ -0.36
FDPS-204	ENST00000461507	SLC9A4	Q6AI14	798 aa		12.79	□□□□□ -0.36
FDPS-204	ENST00000461507	ERAP2	Q6P179	960 aa		12.79	□□□□□ -0.36
FDPS-204	ENST00000461507	PTAR1	Q7Z6K3	402 aa	Predicted RBP	12.79	□□□□□ -0.36
FDPS-204	ENST00000461507	PARG	Q86W56	976 aa		12.79	□□□□□ -0.36
FDPS-204	ENST00000461507	EXD1	Q8NHP7	514 aa		12.79	□□□□□ -0.36
FDPS-204	ENST00000461507	P3H4	Q92791	437 aa		12.79	□□□□□ -0.36
FDPS-204	ENST00000461507	ALS2CR12	Q96Q35	445 aa		12.79	□□□□□ -0.36
FDPS-204	ENST00000461507	PSKH2	Q96QS6	385 aa		12.79	□□□□□ -0.36
FDPS-204	ENST00000461507	TUBGCP5	Q96RT8	1024 aa		12.79	□□□□□ -0.36
FDPS-204	ENST00000461507	CEP41	Q9BYV8	373 aa		12.79	□□□□□ -0.36
FDPS-204	ENST00000461507	CPEB1	Q9BZB8	566 aa	Known RBP	12.79	□□□□□ -0.36
FDPS-204	ENST00000461507	POLR1E	Q9GZS1	481 aa	Known RBP	12.79	□□□□□ -0.36
FDPS-204	ENST00000461507	GGT7	Q9UJ14	662 aa		12.79	□□□□□ -0.36
FDPS-204	ENST00000461507	CSNK1G3	Q9Y6M4	447 aa		12.79	□□□□□ -0.36
FDPS-204	ENST00000461507		U3KQA8	63 aa		12.79	□□□□□ -0.36
FDPS-204	ENST00000461507	ASXL3	Q9C0F0	2248 aa		12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	hCG_1818297	A0A087WSY0	165 aa		12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	ZNF487	B1APH4	448 aa		12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	FPGT	O14772	594 aa		12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	SCAMP1	O15126	338 aa		12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	MATN3	O15232	486 aa		12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	PAK4	O96013	591 aa	Predicted RBP	12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	CP	P00450	1065 aa		12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	JCHAIN	P01591	159 aa		12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	GP1BA	P07359	652 aa		12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	CCNB1	P14635	433 aa		12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	ITIH2	P19823	946 aa		12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	TGM2	P21980	687 aa		12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	CCNC	P24863	283 aa		12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	SUOX	P51687	545 aa		12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	HNRNPK	P61978	463 aa	Known RBP eCLIP	12.78	□□□□□ -0.36	1e-6	■■□□□ 13.3
FDPS-204	ENST00000461507	CCZ1B	P86790	482 aa		12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	CCZ1	P86791	482 aa	Predicted RBP	12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	ELP6	Q0PNE2	266 aa		12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	SLC10A2	Q12908	348 aa	Predicted RBP	12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	TARDBP	Q13148	414 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	COL28A1	Q2UY09	1125 aa		12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	TPRG1L	Q5T0D9	272 aa		12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	CDCP2	Q5VXM1	449 aa		12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	BZW1	Q7L1Q6	419 aa	Known RBP	12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	PDZD3	Q86UT5	571 aa		12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	ZC3H18	Q86VM9	953 aa	Known RBP	12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	VSIG1	Q86XK7	387 aa		12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	PGBD5	Q8N414	524 aa		12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	ZNF548	Q8NEK5	533 aa	Predicted RBP	12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	HCAR2	Q8TDS4	363 aa		12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	CENPT	Q96BT3	561 aa		12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	HDAC11	Q96DB2	347 aa		12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	TBATA	Q96M53	351 aa		12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	ZNF641	Q96N77	438 aa	Predicted RBP	12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	NUDCD1	Q96RS6	583 aa		12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	SEMA3C	Q99985	751 aa		12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	MGME1	Q9BQP7	344 aa		12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	DUSP23	Q9BVJ7	150 aa		12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	CAAP1	Q9H8G2	361 aa		12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	SAE1	Q9UBE0	346 aa	Predicted RBP	12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	PCDHGC4	Q9Y5F7	938 aa		12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	PCDHA3	Q9Y5H8	950 aa		12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	CAPN6	Q9Y6Q1	641 aa		12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	FASN	P49327	2511 aa	Known RBP	12.78	□□□□□ -0.36
FDPS-204	ENST00000461507	NEMP2	A6NFY4	417 aa		12.77	□□□□□ -0.37
FDPS-204	ENST00000461507	IGLON5	A6NGN9	336 aa		12.77	□□□□□ -0.37
FDPS-204	ENST00000461507		A8MX80	341 aa		12.77	□□□□□ -0.37
FDPS-204	ENST00000461507		H3BM21	787 aa		12.77	□□□□□ -0.37
FDPS-204	ENST00000461507		H7C0C1	242 aa		12.77	□□□□□ -0.37
FDPS-204	ENST00000461507		K7ESM1	405 aa		12.77	□□□□□ -0.37
FDPS-204	ENST00000461507	TOR1B	O14657	336 aa		12.77	□□□□□ -0.37
FDPS-204	ENST00000461507	FFAR2	O15552	330 aa		12.77	□□□□□ -0.37
FDPS-204	ENST00000461507	MMP20	O60882	483 aa		12.77	□□□□□ -0.37
FDPS-204	ENST00000461507	HLA-DQB2	P05538	268 aa		12.77	□□□□□ -0.37
FDPS-204	ENST00000461507	ALPPL2	P10696	532 aa		12.77	□□□□□ -0.37
FDPS-204	ENST00000461507	PECAM1	P16284	738 aa	Predicted RBP	12.77	□□□□□ -0.37
FDPS-204	ENST00000461507	IGFALS	P35858	605 aa		12.77	□□□□□ -0.37
FDPS-204	ENST00000461507	ATP5O	P48047	213 aa		12.77	□□□□□ -0.37
FDPS-204	ENST00000461507	CSNK1D	P48730	415 aa		12.77	□□□□□ -0.37
FDPS-204	ENST00000461507	EPHB1	P54762	984 aa		12.77	□□□□□ -0.37
FDPS-204	ENST00000461507	DSC2	Q02487	901 aa		12.77	□□□□□ -0.37
FDPS-204	ENST00000461507	PPID	Q08752	370 aa	Known RBP	12.77	□□□□□ -0.37
FDPS-204	ENST00000461507	NSUN2	Q08J23	767 aa	Known RBP eCLIP	12.77	□□□□□ -0.37
FDPS-204	ENST00000461507	FAM182A	Q5T1J6	154 aa		12.77	□□□□□ -0.37
FDPS-204	ENST00000461507	DENND2C	Q68D51	928 aa		12.77	□□□□□ -0.37
FDPS-204	ENST00000461507	BRAT1	Q6PJG6	821 aa		12.77	□□□□□ -0.37
FDPS-204	ENST00000461507	C19orf48	Q6RUI8	117 aa		12.77	□□□□□ -0.37
FDPS-204	ENST00000461507	NT5DC3	Q86UY8	548 aa		12.77	□□□□□ -0.37
FDPS-204	ENST00000461507	LRRC57	Q8N9N7	239 aa		12.77	□□□□□ -0.37
FDPS-204	ENST00000461507	SNIP1	Q8TAD8	396 aa	Known RBP	12.77	□□□□□ -0.37
FDPS-204	ENST00000461507	TFB1M	Q8WVM0	346 aa	Known RBP	12.77	□□□□□ -0.37
FDPS-204	ENST00000461507	APOLD1	Q96LR9	279 aa		12.77	□□□□□ -0.37
FDPS-204	ENST00000461507	AGAP3	Q96P47	875 aa		12.77	□□□□□ -0.37
FDPS-204	ENST00000461507	NOD2	Q9HC29	1040 aa		12.77	□□□□□ -0.37
FDPS-204	ENST00000461507	PCDH12	Q9NPG4	1184 aa		12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms