RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 HERC3Q15034 1050 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 RALGPS1Q5JS13 557 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 TRIM68Q6AZZ1 485 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 ALG1LQ6GMV1 187 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 KLHDC10Q6PID8 442 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 AFTPHQ6ULP2 937 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 FRMD7Q6ZUT3 714 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 C16orf59Q7L2K0 433 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 HERC6Q8IVU3 1022 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 CPSF7Q8N684 471 aaKnown RBP10.46□□□□□ -0.73
CPNE1-218ENST00000439806 OR13C4Q8NGS5 318 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 GPR150Q8NGU9 434 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 RP9Q8TA86 221 aaKnown RBP10.46□□□□□ -0.73
CPNE1-218ENST00000439806 EXT2Q93063 718 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 ZNF333Q96JL9 665 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 PRICKLE1Q96MT3 831 aaPredicted RBP10.46□□□□□ -0.73
CPNE1-218ENST00000439806 SERPINI1Q99574 410 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 OSBPL1AQ9BXW6 950 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 CCDC68Q9H2F9 335 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 POPDC3Q9HBV1 291 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 TRPC7Q9HCX4 862 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 BATF3Q9NR55 127 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 NMRK1Q9NWW6 199 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 PRPF19Q9UMS4 504 aaKnown RBP10.46□□□□□ -0.73
CPNE1-218ENST00000439806 CRYL1Q9Y2S2 319 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 FIS1Q9Y3D6 152 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 YIPF1Q9Y548 306 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 TRIM17Q9Y577 477 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 A0A1B0GVM2 712 aa10.45□□□□□ -0.74
CPNE1-218ENST00000439806 TCAF2A6NFQ2 919 aa10.45□□□□□ -0.74
CPNE1-218ENST00000439806 SDHDO14521 159 aa10.45□□□□□ -0.74
CPNE1-218ENST00000439806 AIM2O14862 343 aa10.45□□□□□ -0.74
CPNE1-218ENST00000439806 SKAP2O75563 359 aaPredicted RBP10.45□□□□□ -0.74
CPNE1-218ENST00000439806 SEC24AO95486 1093 aa10.45□□□□□ -0.74
CPNE1-218ENST00000439806 MYCP01106 439 aaPredicted RBP10.45□□□□□ -0.74
CPNE1-218ENST00000439806 PIRTP0C851 137 aa10.45□□□□□ -0.74
CPNE1-218ENST00000439806 MBL2P11226 248 aaPredicted RBP10.45□□□□□ -0.74
CPNE1-218ENST00000439806 HNRNPLP14866 589 aaKnown RBP eCLIP10.45□□□□□ -0.74
CPNE1-218ENST00000439806 NUDT2P50583 147 aa10.45□□□□□ -0.74
CPNE1-218ENST00000439806 SCNN1BP51168 640 aa10.45□□□□□ -0.74
CPNE1-218ENST00000439806 PDAP1Q13442 181 aaKnown RBP10.45□□□□□ -0.74
CPNE1-218ENST00000439806 PEX6Q13608 980 aa10.45□□□□□ -0.74
CPNE1-218ENST00000439806 TAF1AQ15573 450 aaPredicted RBP10.45□□□□□ -0.74
CPNE1-218ENST00000439806 GPR158Q5T848 1215 aa10.45□□□□□ -0.74
CPNE1-218ENST00000439806 RNF219Q5W0B1 726 aaPredicted RBP10.45□□□□□ -0.74
CPNE1-218ENST00000439806 TPGS2Q68CL5 300 aa10.45□□□□□ -0.74
CPNE1-218ENST00000439806 GLT6D1Q7Z4J2 308 aa10.45□□□□□ -0.74
CPNE1-218ENST00000439806 CUZD1Q86UP6 607 aa10.45□□□□□ -0.74
CPNE1-218ENST00000439806 CRIPAKQ8N1N5 446 aa10.45□□□□□ -0.74
CPNE1-218ENST00000439806 KDM1BQ8NB78 822 aa10.45□□□□□ -0.74
CPNE1-218ENST00000439806 LPCAT1Q8NF37 534 aa10.45□□□□□ -0.74
CPNE1-218ENST00000439806 OR4L1Q8NH43 312 aa10.45□□□□□ -0.74
CPNE1-218ENST00000439806 CEP70Q8NHQ1 597 aa10.45□□□□□ -0.74
CPNE1-218ENST00000439806 ANKRD49Q8WVL7 239 aa10.45□□□□□ -0.74
CPNE1-218ENST00000439806 IGSF21Q96ID5 467 aa10.45□□□□□ -0.74
CPNE1-218ENST00000439806 LENG8Q96PV6 779 aaPredicted RBP10.45□□□□□ -0.74
CPNE1-218ENST00000439806 PSKH2Q96QS6 385 aa10.45□□□□□ -0.74
CPNE1-218ENST00000439806 TRIB3Q96RU7 358 aa10.45□□□□□ -0.74
CPNE1-218ENST00000439806 TTC1Q99614 292 aa10.45□□□□□ -0.74
CPNE1-218ENST00000439806 AARSD1Q9BTE6 412 aaKnown RBP10.45□□□□□ -0.74
CPNE1-218ENST00000439806 HERC2P3Q9BVR0 1158 aa10.45□□□□□ -0.74
CPNE1-218ENST00000439806 MUC3BQ9H195 1237 aa10.45□□□□□ -0.74
CPNE1-218ENST00000439806 ALG9Q9H6U8 611 aa10.45□□□□□ -0.74
CPNE1-218ENST00000439806 SUDS3Q9H7L9 328 aaPredicted RBP10.45□□□□□ -0.74
CPNE1-218ENST00000439806 S100A14Q9HCY8 104 aa10.45□□□□□ -0.74
CPNE1-218ENST00000439806 MRGBPQ9NV56 204 aa10.45□□□□□ -0.74
CPNE1-218ENST00000439806 INTS10Q9NVR2 710 aaKnown RBP10.45□□□□□ -0.74
CPNE1-218ENST00000439806 NLE1Q9NVX2 485 aaPredicted RBP10.45□□□□□ -0.74
CPNE1-218ENST00000439806 HSFX1Q9UBD0 423 aa10.45□□□□□ -0.74
CPNE1-218ENST00000439806 CDH22Q9UJ99 828 aa10.45□□□□□ -0.74
CPNE1-218ENST00000439806 AGO1Q9UL18 857 aaKnown RBP10.45□□□□□ -0.74
CPNE1-218ENST00000439806 ACTL7AQ9Y615 435 aa10.45□□□□□ -0.74
CPNE1-218ENST00000439806 WASF2Q9Y6W5 498 aa10.45□□□□□ -0.74
CPNE1-218ENST00000439806 UBA6A0AVT1 1052 aaPredicted RBP10.44□□□□□ -0.74
CPNE1-218ENST00000439806 TYW5A2RUC4 315 aaKnown RBP10.44□□□□□ -0.74
CPNE1-218ENST00000439806 TMEM233B4DJY2 109 aa10.44□□□□□ -0.74
CPNE1-218ENST00000439806 H3BNC9 293 aa10.44□□□□□ -0.74
CPNE1-218ENST00000439806 CBX4O00257 560 aa10.44□□□□□ -0.74
CPNE1-218ENST00000439806 PRRG1O14668 218 aa10.44□□□□□ -0.74
CPNE1-218ENST00000439806 PFDN6O15212 129 aa10.44□□□□□ -0.74
CPNE1-218ENST00000439806 GPC4O75487 556 aa10.44□□□□□ -0.74
CPNE1-218ENST00000439806 NDUFS3O75489 264 aa10.44□□□□□ -0.74
CPNE1-218ENST00000439806 RHOBTB1O94844 696 aa10.44□□□□□ -0.74
CPNE1-218ENST00000439806 WISP3O95389 354 aaPredicted RBP10.44□□□□□ -0.74
CPNE1-218ENST00000439806 SOD2P04179 222 aa10.44□□□□□ -0.74
CPNE1-218ENST00000439806 CD1DP15813 335 aa10.44□□□□□ -0.74
CPNE1-218ENST00000439806 HMGA1P17096 107 aaKnown RBP10.44□□□□□ -0.74
CPNE1-218ENST00000439806 IMPDH1P20839 514 aa10.44□□□□□ -0.74
CPNE1-218ENST00000439806 RGRP47804 291 aa10.44□□□□□ -0.74
CPNE1-218ENST00000439806 PPP3CCP48454 512 aa10.44□□□□□ -0.74
CPNE1-218ENST00000439806 ERFP50548 548 aa10.44□□□□□ -0.74
CPNE1-218ENST00000439806 PLK1P53350 603 aa10.44□□□□□ -0.74
CPNE1-218ENST00000439806 ATN1P54259 1190 aaPredicted RBP10.44□□□□□ -0.74
CPNE1-218ENST00000439806 BTKQ06187 659 aa10.44□□□□□ -0.74
CPNE1-218ENST00000439806 SULT2A1Q06520 285 aa10.44□□□□□ -0.74
CPNE1-218ENST00000439806 ART3Q13508 389 aa10.44□□□□□ -0.74
CPNE1-218ENST00000439806 IKBKEQ14164 716 aa10.44□□□□□ -0.74
CPNE1-218ENST00000439806 SEMA3AQ14563 771 aa10.44□□□□□ -0.74
CPNE1-218ENST00000439806 PTPRCAPQ14761 206 aa10.44□□□□□ -0.74
CPNE1-218ENST00000439806 CYTH1Q15438 398 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms