RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 LDB2O43679 373 aa5.14□□□□□ -1.59
HMGB3P5-201ENST00000428894 CYP4B1P13584 511 aa5.14□□□□□ -1.59
HMGB3P5-201ENST00000428894 ENO3P13929 434 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P5-201ENST00000428894 CHN1P15882 459 aa5.14□□□□□ -1.59
HMGB3P5-201ENST00000428894 GNLYP22749 145 aa5.14□□□□□ -1.59
HMGB3P5-201ENST00000428894 AVPR2P30518 371 aa5.14□□□□□ -1.59
HMGB3P5-201ENST00000428894 CLCNKBP51801 687 aa5.14□□□□□ -1.59
HMGB3P5-201ENST00000428894 ART1P52961 327 aa5.14□□□□□ -1.59
HMGB3P5-201ENST00000428894 CDH12P55289 794 aa5.14□□□□□ -1.59
HMGB3P5-201ENST00000428894 KRTAP10-7P60409 375 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P5-201ENST00000428894 RPL36AP83881 106 aaKnown RBP5.14□□□□□ -1.59
HMGB3P5-201ENST00000428894 HYAL1Q12794 435 aa5.14□□□□□ -1.59
HMGB3P5-201ENST00000428894 PDCLQ13371 301 aa5.14□□□□□ -1.59
HMGB3P5-201ENST00000428894 HNF4GQ14541 408 aa5.14□□□□□ -1.59
HMGB3P5-201ENST00000428894 ZNF284Q2VY69 593 aa5.14□□□□□ -1.59
HMGB3P5-201ENST00000428894 CCDC152Q4G0S7 254 aa5.14□□□□□ -1.59
HMGB3P5-201ENST00000428894 GALNT7Q86SF2 657 aa5.14□□□□□ -1.59
HMGB3P5-201ENST00000428894 TICAM2Q86XR7 235 aa5.14□□□□□ -1.59
HMGB3P5-201ENST00000428894 PALB2Q86YC2 1186 aa5.14□□□□□ -1.59
HMGB3P5-201ENST00000428894 CLIP4Q8N3C7 705 aa5.14□□□□□ -1.59
HMGB3P5-201ENST00000428894 OR14A16Q8NHC5 309 aa5.14□□□□□ -1.59
HMGB3P5-201ENST00000428894 HDAC7Q8WUI4 952 aa5.14□□□□□ -1.59
HMGB3P5-201ENST00000428894 GFM1Q96RP9 751 aaKnown RBP5.14□□□□□ -1.59
HMGB3P5-201ENST00000428894 THUMPD2Q9BTF0 503 aaKnown RBP5.14□□□□□ -1.59
HMGB3P5-201ENST00000428894 DEFB129Q9H1M3 183 aa5.14□□□□□ -1.59
HMGB3P5-201ENST00000428894 PRO3102Q9H379 93 aa5.14□□□□□ -1.59
HMGB3P5-201ENST00000428894 TMLHEQ9NVH6 421 aa5.14□□□□□ -1.59
HMGB3P5-201ENST00000428894 IL36RNQ9UBH0 155 aa5.14□□□□□ -1.59
HMGB3P5-201ENST00000428894 TSPYL4Q9UJ04 414 aa5.14□□□□□ -1.59
HMGB3P5-201ENST00000428894 RAI2Q9Y5P3 530 aa5.14□□□□□ -1.59
HMGB3P5-201ENST00000428894 ZNF646O15015 1829 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P5-201ENST00000428894 DLG5Q8TDM6 1919 aa5.13□□□□□ -1.59
HMGB3P5-201ENST00000428894 FAM90A20PA6NIJ5 464 aa5.13□□□□□ -1.59
HMGB3P5-201ENST00000428894 DDAH2O95865 285 aa5.13□□□□□ -1.59
HMGB3P5-201ENST00000428894 FCGR1AP12314 374 aa5.13□□□□□ -1.59
HMGB3P5-201ENST00000428894 RFC1P35251 1148 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P5-201ENST00000428894 THPOP40225 353 aa5.13□□□□□ -1.59
HMGB3P5-201ENST00000428894 RPS6KA3P51812 740 aa5.13□□□□□ -1.59
HMGB3P5-201ENST00000428894 NUDT6P53370 316 aa5.13□□□□□ -1.59
HMGB3P5-201ENST00000428894 GAS1P54826 345 aa5.13□□□□□ -1.59
HMGB3P5-201ENST00000428894 UBXN2AP68543 259 aa5.13□□□□□ -1.59
HMGB3P5-201ENST00000428894 TRAF2Q12933 501 aa5.13□□□□□ -1.59
HMGB3P5-201ENST00000428894 AADACL2Q6P093 401 aa5.13□□□□□ -1.59
HMGB3P5-201ENST00000428894 PRSS57Q6UWY2 283 aa5.13□□□□□ -1.59
HMGB3P5-201ENST00000428894 SERPINA11Q86U17 422 aa5.13□□□□□ -1.59
HMGB3P5-201ENST00000428894 WDR5BQ86VZ2 330 aa5.13□□□□□ -1.59
HMGB3P5-201ENST00000428894 NR2C2APQ86WQ0 139 aa5.13□□□□□ -1.59
HMGB3P5-201ENST00000428894 ANKRD18AQ8IVF6 992 aa5.13□□□□□ -1.59
HMGB3P5-201ENST00000428894 BRSK2Q8IWQ3 736 aa5.13□□□□□ -1.59
HMGB3P5-201ENST00000428894 ZDHHC23Q8IYP9 409 aa5.13□□□□□ -1.59
HMGB3P5-201ENST00000428894 STT3BQ8TCJ2 826 aa5.13□□□□□ -1.59
HMGB3P5-201ENST00000428894 OTUD7AQ8TE49 926 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P5-201ENST00000428894 ISCA1Q9BUE6 129 aa5.13□□□□□ -1.59
HMGB3P5-201ENST00000428894 COA1Q9GZY4 146 aa5.13□□□□□ -1.59
HMGB3P5-201ENST00000428894 ZNF700Q9H0M5 742 aa5.13□□□□□ -1.59
HMGB3P5-201ENST00000428894 ZCCHC17Q9NP64 241 aaKnown RBP5.13□□□□□ -1.59
HMGB3P5-201ENST00000428894 UPB1Q9UBR1 384 aa5.13□□□□□ -1.59
HMGB3P5-201ENST00000428894 SEL1LQ9UBV2 794 aa5.13□□□□□ -1.59
HMGB3P5-201ENST00000428894 OSGIN2Q9Y236 505 aa5.13□□□□□ -1.59
HMGB3P5-201ENST00000428894 DDTLA6NHG4 134 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P5-201ENST00000428894 H0Y3Z8 333 aa5.12□□□□□ -1.59
HMGB3P5-201ENST00000428894 CSTBP04080 98 aaKnown RBP5.12□□□□□ -1.59
HMGB3P5-201ENST00000428894 ACP5P13686 325 aa5.12□□□□□ -1.59
HMGB3P5-201ENST00000428894 NAGAP17050 411 aa5.12□□□□□ -1.59
HMGB3P5-201ENST00000428894 HTR3AP46098 478 aa5.12□□□□□ -1.59
HMGB3P5-201ENST00000428894 AMTP48728 403 aa5.12□□□□□ -1.59
HMGB3P5-201ENST00000428894 COMPP49747 757 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P5-201ENST00000428894 PLCB4Q15147 1175 aa5.12□□□□□ -1.59
HMGB3P5-201ENST00000428894 ATG9BQ674R7 924 aa5.12□□□□□ -1.59
HMGB3P5-201ENST00000428894 C8orf82Q6P1X6 216 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P5-201ENST00000428894 SYT13Q7L8C5 426 aa5.12□□□□□ -1.59
HMGB3P5-201ENST00000428894 TRIM74Q86UV6 250 aa5.12□□□□□ -1.59
HMGB3P5-201ENST00000428894 TRIM73Q86UV7 250 aa5.12□□□□□ -1.59
HMGB3P5-201ENST00000428894 FJX1Q86VR8 437 aa5.12□□□□□ -1.59
HMGB3P5-201ENST00000428894 DEFB123Q8N688 67 aa5.12□□□□□ -1.59
HMGB3P5-201ENST00000428894 FSIP1Q8NA03 581 aa5.12□□□□□ -1.59
HMGB3P5-201ENST00000428894 DDX23Q9BUQ8 820 aaKnown RBP5.12□□□□□ -1.59
HMGB3P5-201ENST00000428894 PLSCR4Q9NRQ2 329 aa5.12□□□□□ -1.59
HMGB3P5-201ENST00000428894 THAP1Q9NVV9 213 aa5.12□□□□□ -1.59
HMGB3P5-201ENST00000428894 SRPRBQ9Y5M8 271 aaKnown RBP5.12□□□□□ -1.59
HMGB3P5-201ENST00000428894 VCANP13611 3396 aa5.11□□□□□ -1.59
HMGB3P5-201ENST00000428894 HMX3A6NHT5 357 aa5.11□□□□□ -1.59
HMGB3P5-201ENST00000428894 BTBD18B2RXH4 712 aa5.11□□□□□ -1.59
HMGB3P5-201ENST00000428894 E7EVH7 732 aa5.11□□□□□ -1.59
HMGB3P5-201ENST00000428894 EYA2O00167 538 aa5.11□□□□□ -1.59
HMGB3P5-201ENST00000428894 KRT38O76015 456 aa5.11□□□□□ -1.59
HMGB3P5-201ENST00000428894 CLDN7O95471 211 aa5.11□□□□□ -1.59
HMGB3P5-201ENST00000428894 ZBTB11O95625 1053 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P5-201ENST00000428894 ARSAP15289 507 aa5.11□□□□□ -1.59
HMGB3P5-201ENST00000428894 SKIV2L2P42285 1042 aaKnown RBP5.11□□□□□ -1.59
HMGB3P5-201ENST00000428894 CLCN5P51795 746 aa5.11□□□□□ -1.59
HMGB3P5-201ENST00000428894 IRX6P78412 446 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P5-201ENST00000428894 TNFAIP1Q13829 316 aa5.11□□□□□ -1.59
HMGB3P5-201ENST00000428894 C1orf228Q6PIY5 440 aa5.11□□□□□ -1.59
HMGB3P5-201ENST00000428894 MON1BQ7L1V2 547 aa5.11□□□□□ -1.59
HMGB3P5-201ENST00000428894 CCDC146Q8IYE0 955 aa5.11□□□□□ -1.59
HMGB3P5-201ENST00000428894 SCAIQ8N9R8 606 aa5.11□□□□□ -1.59
HMGB3P5-201ENST00000428894 MIGA1Q8NAN2 632 aa5.11□□□□□ -1.59
HMGB3P5-201ENST00000428894 TMEM163Q8TC26 289 aa5.11□□□□□ -1.59
HMGB3P5-201ENST00000428894 RAET1EQ8TD07 263 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms