RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 PHBP35232 272 aa14.76□□□□□ -0.05
CXCL12-201ENST00000343575 GALK1P51570 392 aa14.76□□□□□ -0.05
CXCL12-201ENST00000343575 LEXMQ3ZCV2 418 aa14.76□□□□□ -0.05
CXCL12-201ENST00000343575 CYP4X1Q8N118 509 aa14.76□□□□□ -0.05
CXCL12-201ENST00000343575 MDGA1Q8NFP4 955 aa14.76□□□□□ -0.05
CXCL12-201ENST00000343575 RANBP9Q96S59 729 aa14.76□□□□□ -0.05
CXCL12-201ENST00000343575 CPEB1Q9BZB8 566 aaKnown RBP14.76□□□□□ -0.05
CXCL12-201ENST00000343575 ZDHHC4Q9NPG8 344 aa14.76□□□□□ -0.05
CXCL12-201ENST00000343575 A0A0U1RQS6 177 aa14.75□□□□□ -0.05
CXCL12-201ENST00000343575 EXOC1LA0A1B0GW35 172 aa14.75□□□□□ -0.05
CXCL12-201ENST00000343575 TBC1D3BA6NDS4 549 aa14.75□□□□□ -0.05
CXCL12-201ENST00000343575 FAM159BA6NKW6 160 aa14.75□□□□□ -0.05
CXCL12-201ENST00000343575 SHISA7A6NL88 538 aa14.75□□□□□ -0.05
CXCL12-201ENST00000343575 WASH3PC4AMC7 463 aa14.75□□□□□ -0.05
CXCL12-201ENST00000343575 TIMM44O43615 452 aa14.75□□□□□ -0.05
CXCL12-201ENST00000343575 UGT1A9O60656 530 aa14.75□□□□□ -0.05
CXCL12-201ENST00000343575 POLBP06746 335 aa14.75□□□□□ -0.05
CXCL12-201ENST00000343575 CTSLP07711 333 aa14.75□□□□□ -0.05
CXCL12-201ENST00000343575 ADRA1DP25100 572 aa14.75□□□□□ -0.05
CXCL12-201ENST00000343575 ZNF234Q14588 700 aa14.75□□□□□ -0.05
CXCL12-201ENST00000343575 EIF4HQ15056 248 aaKnown RBP14.75□□□□□ -0.05
CXCL12-201ENST00000343575 SMAD1Q15797 465 aaKnown RBP14.75□□□□□ -0.05
CXCL12-201ENST00000343575 ESRP1Q6NXG1 681 aaKnown RBP14.75□□□□□ -0.05
CXCL12-201ENST00000343575 SPATA21Q7Z572 469 aa14.75□□□□□ -0.05
CXCL12-201ENST00000343575 LPCAT1Q8NF37 534 aa14.75□□□□□ -0.05
CXCL12-201ENST00000343575 PDCD6IPQ8WUM4 868 aaKnown RBP14.75□□□□□ -0.05
CXCL12-201ENST00000343575 ZNF669Q96BR6 464 aaPredicted RBP14.75□□□□□ -0.05
CXCL12-201ENST00000343575 ECHDC3Q96DC8 303 aa14.75□□□□□ -0.05
CXCL12-201ENST00000343575 ACOX2Q99424 681 aa14.75□□□□□ -0.05
CXCL12-201ENST00000343575 TMEM245Q9H330 911 aa14.75□□□□□ -0.05
CXCL12-201ENST00000343575 UGT1A7Q9HAW7 530 aa14.75□□□□□ -0.05
CXCL12-201ENST00000343575 UGT1A10Q9HAW8 530 aa14.75□□□□□ -0.05
CXCL12-201ENST00000343575 UGT1A8Q9HAW9 530 aa14.75□□□□□ -0.05
CXCL12-201ENST00000343575 MRM3Q9HC36 420 aaKnown RBP14.75□□□□□ -0.05
CXCL12-201ENST00000343575 TRPV5Q9NQA5 729 aa14.75□□□□□ -0.05
CXCL12-201ENST00000343575 TXLNGQ9NUQ3 528 aa14.75□□□□□ -0.05
CXCL12-201ENST00000343575 SPATS2LQ9NUQ6 558 aaKnown RBP14.75□□□□□ -0.05
CXCL12-201ENST00000343575 ABCF3Q9NUQ8 709 aa14.75□□□□□ -0.05
CXCL12-201ENST00000343575 SLC17A6Q9P2U8 582 aa14.75□□□□□ -0.05
CXCL12-201ENST00000343575 WASF2Q9Y6W5 498 aa14.75□□□□□ -0.05
CXCL12-201ENST00000343575 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.74□□□□□ -0.05
CXCL12-201ENST00000343575 FOXO6A8MYZ6 492 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 POP4O95707 220 aaKnown RBP14.74□□□□□ -0.05
CXCL12-201ENST00000343575 HLA-EP13747 358 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 GRIA2P42262 883 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 MAPK8P45983 427 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 ARCN1P48444 511 aaKnown RBP14.74□□□□□ -0.05
CXCL12-201ENST00000343575 TFF2Q03403 129 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 BCL2L1Q07817 233 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 FRG1Q14331 258 aaKnown RBP14.74□□□□□ -0.05
CXCL12-201ENST00000343575 PTPRCAPQ14761 206 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 CNGA3Q16281 694 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 SPANXN3Q5MJ09 141 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 CAPRIN2Q6IMN6 1127 aaKnown RBP14.74□□□□□ -0.05
CXCL12-201ENST00000343575 ASRGL1Q7L266 308 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 RYBPQ8N488 228 aaPredicted RBP14.74□□□□□ -0.05
CXCL12-201ENST00000343575 OR13J1Q8NGT2 312 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 PTCD2Q8WV60 388 aaKnown RBP14.74□□□□□ -0.05
CXCL12-201ENST00000343575 DCAKDQ8WVC6 231 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 CKAP2Q8WWK9 683 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 EID2BQ96D98 161 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 RMDN1Q96DB5 314 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 TUBGCP5Q96RT8 1024 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 CYTH2Q99418 400 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 PRDM6Q9NQX0 595 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 FETUBQ9UGM5 382 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 RPL26L1Q9UNX3 145 aaKnown RBP14.74□□□□□ -0.05
CXCL12-201ENST00000343575 ARL5AQ9Y689 179 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 POC1B-GALNT4F8VUJ3 575 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 K7EQS6 105 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 SOCS5O75159 536 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 SMNDC1O75940 238 aaKnown RBP eCLIP14.74□□□□□ -0.05
CXCL12-201ENST00000343575 ERVK-10P10266 1014 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 STX2P32856 288 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 CTHP32929 405 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 MSH2P43246 934 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 BLMHQ13867 455 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 TSTD2Q5T7W7 516 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 TDRPQ86YL5 185 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 KDM1BQ8NB78 822 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.74□□□□□ -0.05
CXCL12-201ENST00000343575 BRSK1Q8TDC3 778 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 BLOC1S5Q8TDH9 187 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 SPOCK2Q92563 424 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 MRRFQ96E11 262 aaKnown RBP14.74□□□□□ -0.05
CXCL12-201ENST00000343575 THOC1Q96FV9 657 aaKnown RBP14.74□□□□□ -0.05
CXCL12-201ENST00000343575 CERS2Q96G23 380 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 PAFAH2Q99487 392 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 ZDHHC6Q9H6R6 413 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 KLHL14Q9P2G3 628 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 PLA2G4CQ9UP65 541 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 ACTL7BQ9Y614 415 aa14.74□□□□□ -0.05
CXCL12-201ENST00000343575 COL6A3P12111 3177 aa14.73□□□□□ -0.05
CXCL12-201ENST00000343575 BPTFQ12830 3046 aa14.73□□□□□ -0.05
CXCL12-201ENST00000343575 HEATR9A2RTY3 570 aa14.73□□□□□ -0.05
CXCL12-201ENST00000343575 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.73□□□□□ -0.05
CXCL12-201ENST00000343575 SPECC1L-ADORA2AF8WAN1 911 aa14.73□□□□□ -0.05
CXCL12-201ENST00000343575 BUD23O43709 281 aaKnown RBP14.73□□□□□ -0.05
CXCL12-201ENST00000343575 NARSO43776 548 aaKnown RBP14.73□□□□□ -0.05
CXCL12-201ENST00000343575 FAM155BO75949 473 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms