RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 CSF2P04141 144 aa9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 CDK4P11802 303 aa9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 MX2P20592 715 aa9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 MMP12P39900 470 aa9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 GARSP41250 739 aaKnown RBP9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 NOP2P46087 812 aaKnown RBP9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 PFN3P60673 137 aa9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 HNRNPKP61978 463 aaKnown RBP eCLIP9.79□□□□□ -0.849e-7■■□□□ 13.3
TNFRSF1A-214ENST00000543048 SEMG2Q02383 582 aa9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 ITKQ08881 620 aa9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 ZNF211Q13398 564 aaPredicted RBP9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 PDE1CQ14123 709 aaPredicted RBP9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 FZD2Q14332 565 aa9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 LRRC14Q15048 493 aa9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 AGERQ15109 404 aa9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 HS1BP3Q53T59 392 aa9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 ODF2Q5BJF6 829 aa9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 ZNF542PQ5EBM4 170 aa9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 LRRC38Q5VT99 294 aa9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 NCBP2-AS2Q69YL0 99 aa9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 TIGD7Q6NT04 549 aaPredicted RBP9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 TMPRSS7Q7RTY8 843 aa9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 VSIG1Q86XK7 387 aa9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 PQLC3Q8N755 202 aa9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 TP53I13Q8NBR0 393 aaPredicted RBP9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 RFFLQ8WZ73 363 aa9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 FATE1Q969F0 183 aa9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 PANX2Q96RD6 677 aa9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 MGME1Q9BQP7 344 aa9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 NT5MQ9NPB1 228 aa9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 MBNL1Q9NR56 388 aaKnown RBP9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 DNAJC28Q9NX36 388 aa9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 AMACRQ9UHK6 382 aa9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 KLK13Q9UKR3 277 aa9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 PHTF1Q9UMS5 762 aa9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 COQ6Q9Y2Z9 468 aa9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 PCDHGC4Q9Y5F7 938 aa9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 PCDHGA1Q9Y5H4 931 aa9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 PCDHA13Q9Y5I0 950 aa9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 CACNA1BQ00975 2339 aa9.79□□□□□ -0.84
TNFRSF1A-214ENST00000543048 LRP4O75096 1905 aa9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 ZFC3H1O60293 1989 aaKnown RBP9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 LRRD1A4D1F6 860 aa9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 ZNF487B1APH4 448 aa9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 H3BM21 787 aa9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 TRIM38O00635 465 aa9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 SCAMP1O15126 338 aa9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 MFSD11O43934 449 aa9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 SOCS5O75159 536 aa9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 PRKCGP05129 697 aa9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 PROS1P07225 676 aa9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 C6P13671 934 aa9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 ZFXP17010 805 aaPredicted RBP9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 CKMT2P17540 419 aa9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 COMTP21964 271 aa9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 NFKBIAP25963 317 aa9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 CYLC1P35663 651 aaPredicted RBP9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 IGFALSP35858 605 aa9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 PEX5P50542 639 aa9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 THOP1P52888 689 aa9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 HADHBP55084 474 aaKnown RBP9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 MAXP61244 160 aa9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 SLC10A2Q12908 348 aaPredicted RBP9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 EIF2B5Q13144 721 aaKnown RBP9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 DNAJC3Q13217 504 aa9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 SPA17Q15506 151 aa9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 WSCD2Q2TBF2 565 aa9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 CCDC157Q569K6 752 aa9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 LIPIQ6XZB0 460 aa9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 CCNI2Q6ZMN8 369 aaPredicted RBP9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 DPPA4Q7L190 304 aa9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 PARGQ86W56 976 aa9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 TMTC1Q8IUR5 882 aa9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 RHOT1Q8IXI2 618 aa9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 GALNT15Q8N3T1 639 aa9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 CCNYQ8ND76 341 aa9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 OR4C6Q8NH72 309 aa9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 PDCD6IPQ8WUM4 868 aaKnown RBP9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 BTN2A2Q8WVV5 523 aa9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 MAML1Q92585 1016 aa9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 LUC7LQ9NQ29 371 aaKnown RBP9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 HAUS2Q9NVX0 235 aa9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 RBM22Q9NW64 420 aaKnown RBP eCLIP9.78□□□□□ -0.846e-10■■□□□ 12.5
TNFRSF1A-214ENST00000543048 UCKL1Q9NWZ5 548 aa9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 DDX56Q9NY93 547 aaKnown RBP9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 ALG6Q9Y672 507 aa9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 EPN1Q9Y6I3 576 aaPredicted RBP9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 CSNK1G3Q9Y6M4 447 aa9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 SPEGQ15772 3267 aa9.78□□□□□ -0.84
TNFRSF1A-214ENST00000543048 C3orf70A6NLC5 250 aaPredicted RBP9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 A8MX80 341 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 C1QTNF9BB2RNN3 333 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 SIGLEC6O43699 453 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 MAP3K6O95382 1288 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 CPP00450 1065 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 ELFN1P0C7U0 828 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 C1QTNF9P0C862 333 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 ALPPL2P10696 532 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 CYP2A6P11509 494 aaPredicted RBP9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 KRT10P13645 584 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms