RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 CACNA1EQ15878 2313 aa19.53■□□□□ 0.72
DDX55-207ENST00000540763 A0A0J9YYE9 177 aa19.52■□□□□ 0.72
DDX55-207ENST00000540763 CAPN8A6NHC0 703 aa19.52■□□□□ 0.72
DDX55-207ENST00000540763 PRAMEF26H0Y7S4 382 aa19.52■□□□□ 0.72
DDX55-207ENST00000540763 PSMD11O00231 422 aa19.52■□□□□ 0.72
DDX55-207ENST00000540763 BCAT2O15382 392 aaPredicted RBP19.52■□□□□ 0.72
DDX55-207ENST00000540763 MT-CYBP00156 380 aaPredicted RBP19.52■□□□□ 0.72
DDX55-207ENST00000540763 TRBC1P01850 177 aa19.52■□□□□ 0.72
DDX55-207ENST00000540763 PDHA1P08559 390 aa19.52■□□□□ 0.72
DDX55-207ENST00000540763 VIPR1P32241 457 aa19.52■□□□□ 0.72
DDX55-207ENST00000540763 EPHB1P54762 984 aa19.52■□□□□ 0.72
DDX55-207ENST00000540763 GEMP55040 296 aa19.52■□□□□ 0.72
DDX55-207ENST00000540763 ETF1P62495 437 aaKnown RBP19.52■□□□□ 0.72
DDX55-207ENST00000540763 RACK1P63244 317 aaKnown RBP19.52■□□□□ 0.72
DDX55-207ENST00000540763 CDK18Q07002 472 aa19.52■□□□□ 0.72
DDX55-207ENST00000540763 RALGDSQ12967 914 aa19.52■□□□□ 0.72
DDX55-207ENST00000540763 CSRP2Q16527 193 aa19.52■□□□□ 0.72
DDX55-207ENST00000540763 LRRC73Q5JTD7 316 aa19.52■□□□□ 0.72
DDX55-207ENST00000540763 SEL1L3Q68CR1 1132 aa19.52■□□□□ 0.72
DDX55-207ENST00000540763 KDELC1Q6UW63 502 aa19.52■□□□□ 0.72
DDX55-207ENST00000540763 DGLUCYQ7Z3D6 616 aa19.52■□□□□ 0.72
DDX55-207ENST00000540763 RAVER1Q8IY67 606 aaKnown RBP19.52■□□□□ 0.72
DDX55-207ENST00000540763 DCLK2Q8N568 766 aa19.52■□□□□ 0.72
DDX55-207ENST00000540763 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.52■□□□□ 0.72
DDX55-207ENST00000540763 FAM71DQ8N9W8 422 aa19.52■□□□□ 0.72
DDX55-207ENST00000540763 C12orf50Q8NA57 414 aaPredicted RBP19.52■□□□□ 0.72
DDX55-207ENST00000540763 SPATA22Q8NHS9 363 aa19.52■□□□□ 0.72
DDX55-207ENST00000540763 FAM174AQ8TBP5 190 aa19.52■□□□□ 0.72
DDX55-207ENST00000540763 LENG8Q96PV6 779 aaPredicted RBP19.52■□□□□ 0.72
DDX55-207ENST00000540763 C1QTNF7Q9BXJ2 289 aa19.52■□□□□ 0.72
DDX55-207ENST00000540763 EBF2Q9HAK2 575 aa19.52■□□□□ 0.72
DDX55-207ENST00000540763 KCTD5Q9NXV2 234 aa19.52■□□□□ 0.72
DDX55-207ENST00000540763 B4GALT6Q9UBX8 382 aa19.52■□□□□ 0.72
DDX55-207ENST00000540763 ZNF148Q9UQR1 794 aa19.52■□□□□ 0.72
DDX55-207ENST00000540763 AAR2Q9Y312 384 aaKnown RBP19.52■□□□□ 0.72
DDX55-207ENST00000540763 SAR1BQ9Y6B6 198 aa19.52■□□□□ 0.72
DDX55-207ENST00000540763 GON4LQ3T8J9 2241 aa19.52■□□□□ 0.71
DDX55-207ENST00000540763 ATXN2Q99700 1313 aaKnown RBP19.51■□□□□ 0.71
DDX55-207ENST00000540763 TM7SF2O76062 418 aa19.51■□□□□ 0.71
DDX55-207ENST00000540763 ZNF30P17039 623 aa19.51■□□□□ 0.71
DDX55-207ENST00000540763 HNRNPA2B1P22626 353 aaKnown RBP19.51■□□□□ 0.71
DDX55-207ENST00000540763 MAOBP27338 520 aa19.51■□□□□ 0.71
DDX55-207ENST00000540763 GDF10P55107 478 aa19.51■□□□□ 0.71
DDX55-207ENST00000540763 FAM193AP78312 1265 aa19.51■□□□□ 0.71
DDX55-207ENST00000540763 PRPSAP1Q14558 356 aa19.51■□□□□ 0.71
DDX55-207ENST00000540763 PUM1Q14671 1186 aaKnown RBP eCLIP19.51■□□□□ 0.71
DDX55-207ENST00000540763 CYP1B1Q16678 543 aa19.51■□□□□ 0.71
DDX55-207ENST00000540763 ARHGEF18Q6ZSZ5 1173 aa19.51■□□□□ 0.71
DDX55-207ENST00000540763 C17orf53Q8N3J3 647 aaPredicted RBP19.51■□□□□ 0.71
DDX55-207ENST00000540763 PRELID2Q8N945 189 aa19.51■□□□□ 0.71
DDX55-207ENST00000540763 CCDC110Q8TBZ0 833 aa19.51■□□□□ 0.71
DDX55-207ENST00000540763 OXNAD1Q96HP4 312 aaPredicted RBP19.51■□□□□ 0.71
DDX55-207ENST00000540763 SRPK1Q96SB4 655 aaKnown RBP19.51■□□□□ 0.71
DDX55-207ENST00000540763 SLC17A9Q9BYT1 436 aa19.51■□□□□ 0.71
DDX55-207ENST00000540763 MIR1-1HGQ9H1L0 117 aa19.51■□□□□ 0.71
DDX55-207ENST00000540763 SEMA4GQ9NTN9 838 aa19.51■□□□□ 0.71
DDX55-207ENST00000540763 SCN8AQ9UQD0 1980 aa19.51■□□□□ 0.71
DDX55-207ENST00000540763 GOLGA6L10A0A0M3HER8 536 aa19.5■□□□□ 0.71
DDX55-207ENST00000540763 LOC285095A0A1B0GVY8 99 aa19.5■□□□□ 0.71
DDX55-207ENST00000540763 GOLGA6CA6NDK9 693 aa19.5■□□□□ 0.71
DDX55-207ENST00000540763 GOLGA6BA6NDN3 693 aa19.5■□□□□ 0.71
DDX55-207ENST00000540763 ANKRD66B4E2M5 251 aa19.5■□□□□ 0.71
DDX55-207ENST00000540763 NDST3O95803 873 aa19.5■□□□□ 0.71
DDX55-207ENST00000540763 ELFN1P0C7U0 828 aa19.5■□□□□ 0.71
DDX55-207ENST00000540763 GOLGA6DP0CG33 693 aa19.5■□□□□ 0.71
DDX55-207ENST00000540763 MAT2AP31153 395 aaKnown RBP19.5■□□□□ 0.71
DDX55-207ENST00000540763 AKT2P31751 481 aa19.5■□□□□ 0.71
DDX55-207ENST00000540763 ACTN2P35609 894 aa19.5■□□□□ 0.71
DDX55-207ENST00000540763 TNNT3P45378 269 aaPredicted RBP19.5■□□□□ 0.71
DDX55-207ENST00000540763 AFF3P51826 1226 aaKnown RBP19.5■□□□□ 0.71
DDX55-207ENST00000540763 WNT3AP56704 352 aa19.5■□□□□ 0.71
DDX55-207ENST00000540763 LMNB2Q03252 620 aa19.5■□□□□ 0.71
DDX55-207ENST00000540763 OVGP1Q12889 678 aa19.5■□□□□ 0.71
DDX55-207ENST00000540763 SGCGQ13326 291 aa19.5■□□□□ 0.71
DDX55-207ENST00000540763 PARP6Q2NL67 630 aa19.5■□□□□ 0.71
DDX55-207ENST00000540763 C4orf22Q6V702 233 aa19.5■□□□□ 0.71
DDX55-207ENST00000540763 LIPIQ6XZB0 460 aa19.5■□□□□ 0.71
DDX55-207ENST00000540763 NYAP1Q6ZVC0 841 aa19.5■□□□□ 0.71
DDX55-207ENST00000540763 IQCHQ86VS3 1027 aa19.5■□□□□ 0.71
DDX55-207ENST00000540763 ZCCHC9Q8N567 271 aaKnown RBP19.5■□□□□ 0.71
DDX55-207ENST00000540763 TMEM145Q8NBT3 493 aa19.5■□□□□ 0.71
DDX55-207ENST00000540763 LPCAT1Q8NF37 534 aa19.5■□□□□ 0.71
DDX55-207ENST00000540763 IFT43Q96FT9 208 aa19.5■□□□□ 0.71
DDX55-207ENST00000540763 MS4A14Q96JA4 679 aa19.5■□□□□ 0.71
DDX55-207ENST00000540763 SERAC1Q96JX3 654 aa19.5■□□□□ 0.71
DDX55-207ENST00000540763 GORASP1Q9BQQ3 440 aa19.5■□□□□ 0.71
DDX55-207ENST00000540763 CAPN10Q9HC96 672 aa19.5■□□□□ 0.71
DDX55-207ENST00000540763 TM9SF3Q9HD45 589 aa19.5■□□□□ 0.71
DDX55-207ENST00000540763 GOLGA6AQ9NYA3 693 aa19.5■□□□□ 0.71
DDX55-207ENST00000540763 RNF14Q9UBS8 474 aa19.5■□□□□ 0.71
DDX55-207ENST00000540763 FRYLO94915 3013 aa19.5■□□□□ 0.71
DDX55-207ENST00000540763 ADAMTS9Q9P2N4 1935 aa19.49■□□□□ 0.71
DDX55-207ENST00000540763 IGLON5A6NGN9 336 aa19.49■□□□□ 0.71
DDX55-207ENST00000540763 NPIPB15A6NHN6 443 aaPredicted RBP19.49■□□□□ 0.71
DDX55-207ENST00000540763 KHNYNO15037 678 aaKnown RBP19.49■□□□□ 0.71
DDX55-207ENST00000540763 FANCGO15287 622 aa19.49■□□□□ 0.71
DDX55-207ENST00000540763 MMP20O60882 483 aa19.49■□□□□ 0.71
DDX55-207ENST00000540763 PMPCBO75439 489 aa19.49■□□□□ 0.71
DDX55-207ENST00000540763 HEXIM1O94992 359 aaKnown RBP19.49■□□□□ 0.71
DDX55-207ENST00000540763 PRKCGP05129 697 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 223.8 ms