RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 C7orf26Q96N11 449 aa13.84□□□□□ -0.19
BRAT1-203ENST00000467558 FCRL5Q96RD9 977 aa13.84□□□□□ -0.19
BRAT1-203ENST00000467558 PNPLA8Q9NP80 782 aa13.84□□□□□ -0.19
BRAT1-203ENST00000467558 CLIC5Q9NZA1 410 aa13.84□□□□□ -0.19
BRAT1-203ENST00000467558 TDRKHQ9Y2W6 561 aaKnown RBP13.84□□□□□ -0.19
BRAT1-203ENST00000467558 CPQQ9Y646 472 aa13.84□□□□□ -0.19
BRAT1-203ENST00000467558 OTCP00480 354 aa13.84□□□□□ -0.19
BRAT1-203ENST00000467558 SNRPB2P08579 225 aaKnown RBP13.84□□□□□ -0.19
BRAT1-203ENST00000467558 GPR1P46091 355 aa13.84□□□□□ -0.19
BRAT1-203ENST00000467558 DYNC1I2Q13409 638 aaKnown RBP13.84□□□□□ -0.19
BRAT1-203ENST00000467558 CYP2A13Q16696 494 aa13.84□□□□□ -0.19
BRAT1-203ENST00000467558 DOK6Q6PKX4 331 aa13.84□□□□□ -0.19
BRAT1-203ENST00000467558 GPRIN3Q6ZVF9 776 aa13.84□□□□□ -0.19
BRAT1-203ENST00000467558 SAPCD2Q86UD0 394 aa13.84□□□□□ -0.19
BRAT1-203ENST00000467558 SLC44A2Q8IWA5 706 aaPredicted RBP13.84□□□□□ -0.19
BRAT1-203ENST00000467558 RP9Q8TA86 221 aaKnown RBP13.84□□□□□ -0.19
BRAT1-203ENST00000467558 NPY6RQ99463 290 aa13.84□□□□□ -0.19
BRAT1-203ENST00000467558 CDH19Q9H159 772 aa13.84□□□□□ -0.19
BRAT1-203ENST00000467558 ADAMTS10Q9H324 1103 aa13.84□□□□□ -0.19
BRAT1-203ENST00000467558 HECAQ9UBI9 543 aaPredicted RBP13.84□□□□□ -0.19
BRAT1-203ENST00000467558 PCDHB1Q9Y5F3 818 aa13.84□□□□□ -0.19
BRAT1-203ENST00000467558 MYH11P35749 1972 aa13.84□□□□□ -0.19
BRAT1-203ENST00000467558 TGDSO95455 350 aa13.83□□□□□ -0.19
BRAT1-203ENST00000467558 ZNF682O95780 498 aa13.83□□□□□ -0.19
BRAT1-203ENST00000467558 SLC10A3P09131 477 aa13.83□□□□□ -0.19
BRAT1-203ENST00000467558 CLDN10P78369 228 aa13.83□□□□□ -0.19
BRAT1-203ENST00000467558 TSTD2Q5T7W7 516 aa13.83□□□□□ -0.19
BRAT1-203ENST00000467558 ESRP1Q6NXG1 681 aaKnown RBP13.83□□□□□ -0.19
BRAT1-203ENST00000467558 HFE2Q6ZVN8 426 aa13.83□□□□□ -0.19
BRAT1-203ENST00000467558 PPP3R2Q96LZ3 170 aa13.83□□□□□ -0.19
BRAT1-203ENST00000467558 SMOQ99835 787 aa13.83□□□□□ -0.19
BRAT1-203ENST00000467558 PIF1Q9H611 641 aa13.83□□□□□ -0.19
BRAT1-203ENST00000467558 AP3M1Q9Y2T2 418 aa13.83□□□□□ -0.19
BRAT1-203ENST00000467558 ANKRD36CQ5JPF3 1778 aa13.83□□□□□ -0.2
BRAT1-203ENST00000467558 INSIG1O15503 277 aa13.83□□□□□ -0.2
BRAT1-203ENST00000467558 AP1S1P61966 158 aa13.83□□□□□ -0.2
BRAT1-203ENST00000467558 SLC25A3Q00325 362 aa13.83□□□□□ -0.2
BRAT1-203ENST00000467558 ZBTB17Q13105 803 aa13.83□□□□□ -0.2
BRAT1-203ENST00000467558 USP4Q13107 963 aa13.83□□□□□ -0.2
BRAT1-203ENST00000467558 FAM46CQ5VWP2 391 aa13.83□□□□□ -0.2
BRAT1-203ENST00000467558 ZDHHC20Q5W0Z9 365 aa13.83□□□□□ -0.2
BRAT1-203ENST00000467558 FSTL4Q6MZW2 842 aa13.83□□□□□ -0.2
BRAT1-203ENST00000467558 ARL14EPQ8N8R7 260 aaPredicted RBP13.83□□□□□ -0.2
BRAT1-203ENST00000467558 PIK3R5Q8WYR1 880 aa13.83□□□□□ -0.2
BRAT1-203ENST00000467558 DLG3Q92796 817 aa13.83□□□□□ -0.2
BRAT1-203ENST00000467558 PLEKHA8Q96JA3 519 aa13.83□□□□□ -0.2
BRAT1-203ENST00000467558 DACH2Q96NX9 599 aa13.83□□□□□ -0.2
BRAT1-203ENST00000467558 TMEM175Q9BSA9 504 aa13.83□□□□□ -0.2
BRAT1-203ENST00000467558 TLE6Q9H808 572 aa13.83□□□□□ -0.2
BRAT1-203ENST00000467558 RNPEPL1Q9HAU8 725 aa13.83□□□□□ -0.2
BRAT1-203ENST00000467558 FNIP2Q9P278 1114 aa13.83□□□□□ -0.2
BRAT1-203ENST00000467558 VPS51Q9UID3 782 aa13.83□□□□□ -0.2
BRAT1-203ENST00000467558 GABRQQ9UN88 632 aa13.83□□□□□ -0.2
BRAT1-203ENST00000467558 RWDD3Q9Y3V2 267 aa13.83□□□□□ -0.2
BRAT1-203ENST00000467558 LTBP4Q8N2S1 1624 aa13.83□□□□□ -0.2
BRAT1-203ENST00000467558 RAD23AP54725 363 aa13.83□□□□□ -0.2
BRAT1-203ENST00000467558 KCNJ2P63252 427 aa13.83□□□□□ -0.2
BRAT1-203ENST00000467558 TMEM63BQ5T3F8 832 aa13.83□□□□□ -0.2
BRAT1-203ENST00000467558 SLC9A4Q6AI14 798 aa13.83□□□□□ -0.2
BRAT1-203ENST00000467558 TRMT10BQ6PF06 316 aaKnown RBP13.83□□□□□ -0.2
BRAT1-203ENST00000467558 RBM23Q86U06 439 aaKnown RBP13.83□□□□□ -0.2
BRAT1-203ENST00000467558 CDYL2Q8N8U2 506 aa13.83□□□□□ -0.2
BRAT1-203ENST00000467558 OSCP1Q8WVF1 389 aa13.83□□□□□ -0.2
BRAT1-203ENST00000467558 SPOCK2Q92563 424 aa13.83□□□□□ -0.2
BRAT1-203ENST00000467558 TIFAQ96CG3 184 aa13.83□□□□□ -0.2
BRAT1-203ENST00000467558 THAP11Q96EK4 314 aa13.83□□□□□ -0.2
BRAT1-203ENST00000467558 C8orf48Q96LL4 319 aa13.83□□□□□ -0.2
BRAT1-203ENST00000467558 BDH2Q9BUT1 245 aa13.83□□□□□ -0.2
BRAT1-203ENST00000467558 PNPOQ9NVS9 261 aa13.83□□□□□ -0.2
BRAT1-203ENST00000467558 EVLQ9UI08 416 aaPredicted RBP13.83□□□□□ -0.2
BRAT1-203ENST00000467558 CORO1CQ9ULV4 474 aaPredicted RBP13.83□□□□□ -0.2
BRAT1-203ENST00000467558 ASB3Q9Y575 518 aa13.83□□□□□ -0.2
BRAT1-203ENST00000467558 SLC7A4O43246 635 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 HCRTO43612 131 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 PLIN3O60664 434 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 ZNF623O75123 536 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 CNMDO75829 334 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 HGFP14210 728 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 TSPAN8P19075 237 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 ATP6V1B2P21281 511 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 GPR15P49685 360 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 MLLT6P55198 1093 aaPredicted RBP13.82□□□□□ -0.2
BRAT1-203ENST00000467558 CDH13P55290 713 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 LPIN1Q14693 890 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 RAET1GQ6H3X3 334 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 LINGO4Q6UY18 593 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 DET1Q7L5Y6 550 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 PCDH20Q8N6Y1 951 aaKnown RBP13.82□□□□□ -0.2
BRAT1-203ENST00000467558 HEXDCQ8WVB3 486 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 SYNDIG1Q9H7V2 258 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 DEC1Q9P2X7 70 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 PADI4Q9UM07 663 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 SQORQ9Y6N5 450 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 FOXO6A8MYZ6 492 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 DEAF1O75398 565 aaPredicted RBP13.82□□□□□ -0.2
BRAT1-203ENST00000467558 IPO13O94829 963 aaKnown RBP13.82□□□□□ -0.2
BRAT1-203ENST00000467558 ATP6V1B1P15313 513 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 NMBRP28336 390 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 PKNOX1P55347 436 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 POM121L1PQ3SYA9 428 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms