RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 TMEM174Q8WUU8 243 aa6.58□□□□□ -1.36
LEMD3-206ENST00000545026 C1orf74Q96LT6 269 aa6.58□□□□□ -1.36
LEMD3-206ENST00000545026 WDR77Q9BQA1 342 aaPredicted RBP6.58□□□□□ -1.36
LEMD3-206ENST00000545026 TMPRSS5Q9H3S3 457 aa6.58□□□□□ -1.36
LEMD3-206ENST00000545026 CNOT8Q9UFF9 292 aaKnown RBP6.58□□□□□ -1.36
LEMD3-206ENST00000545026 AAR2Q9Y312 384 aaKnown RBP6.58□□□□□ -1.36
LEMD3-206ENST00000545026 BTBD18B2RXH4 712 aa6.57□□□□□ -1.36
LEMD3-206ENST00000545026 MDM4O15151 490 aa6.57□□□□□ -1.36
LEMD3-206ENST00000545026 IFNA2P01563 188 aa6.57□□□□□ -1.36
LEMD3-206ENST00000545026 PRR35P0CG20 571 aa6.57□□□□□ -1.36
LEMD3-206ENST00000545026 ETFAP13804 333 aa6.57□□□□□ -1.36
LEMD3-206ENST00000545026 CDH8P55286 799 aa6.57□□□□□ -1.36
LEMD3-206ENST00000545026 AIMP2Q13155 320 aaKnown RBP6.57□□□□□ -1.36
LEMD3-206ENST00000545026 SHBQ15464 509 aa6.57□□□□□ -1.36
LEMD3-206ENST00000545026 SOWAHAQ2M3V2 549 aa6.57□□□□□ -1.36
LEMD3-206ENST00000545026 TCTN1Q2MV58 587 aa6.57□□□□□ -1.36
LEMD3-206ENST00000545026 SGO1Q5FBB7 561 aa6.57□□□□□ -1.36
LEMD3-206ENST00000545026 EPHA10Q5JZY3 1008 aa6.57□□□□□ -1.36
LEMD3-206ENST00000545026 GKAP1Q5VSY0 366 aaPredicted RBP6.57□□□□□ -1.36
LEMD3-206ENST00000545026 LCTLQ6UWM7 567 aa6.57□□□□□ -1.36
LEMD3-206ENST00000545026 CHST9Q7L1S5 443 aa6.57□□□□□ -1.36
LEMD3-206ENST00000545026 CAMK1DQ8IU85 385 aa6.57□□□□□ -1.36
LEMD3-206ENST00000545026 ZCCHC9Q8N567 271 aaKnown RBP6.57□□□□□ -1.36
LEMD3-206ENST00000545026 TEX45Q8NA69 505 aa6.57□□□□□ -1.36
LEMD3-206ENST00000545026 BICD2Q8TD16 824 aa6.57□□□□□ -1.36
LEMD3-206ENST00000545026 TMEM18Q96B42 140 aa6.57□□□□□ -1.36
LEMD3-206ENST00000545026 CALML4Q96GE6 196 aa6.57□□□□□ -1.36
LEMD3-206ENST00000545026 ZFYVE19Q96K21 471 aa6.57□□□□□ -1.36
LEMD3-206ENST00000545026 NPFFR1Q9GZQ6 430 aa6.57□□□□□ -1.36
LEMD3-206ENST00000545026 TASP1Q9H6P5 420 aa6.57□□□□□ -1.36
LEMD3-206ENST00000545026 SH2D4AQ9H788 454 aa6.57□□□□□ -1.36
LEMD3-206ENST00000545026 MAGEE1Q9HCI5 957 aa6.57□□□□□ -1.36
LEMD3-206ENST00000545026 BPIFA1Q9NP55 256 aa6.57□□□□□ -1.36
LEMD3-206ENST00000545026 RRP7BPQ9NSQ0 103 aa6.57□□□□□ -1.36
LEMD3-206ENST00000545026 PCDHGB4Q9UN71 923 aa6.57□□□□□ -1.36
LEMD3-206ENST00000545026 COG5Q9UP83 839 aa6.57□□□□□ -1.36
LEMD3-206ENST00000545026 GAGE12JA6NER3 117 aa6.56□□□□□ -1.36
LEMD3-206ENST00000545026 PGM3O95394 542 aa6.56□□□□□ -1.36
LEMD3-206ENST00000545026 KLKB1P03952 638 aa6.56□□□□□ -1.36
LEMD3-206ENST00000545026 KRT10P13645 584 aa6.56□□□□□ -1.36
LEMD3-206ENST00000545026 AKR1B1P15121 316 aa6.56□□□□□ -1.36
LEMD3-206ENST00000545026 CHRNB2P17787 502 aa6.56□□□□□ -1.36
LEMD3-206ENST00000545026 KELP23276 732 aa6.56□□□□□ -1.36
LEMD3-206ENST00000545026 HMGA2P52926 109 aa6.56□□□□□ -1.36
LEMD3-206ENST00000545026 CDH12P55289 794 aa6.56□□□□□ -1.36
LEMD3-206ENST00000545026 EPS8Q12929 822 aa6.56□□□□□ -1.36
LEMD3-206ENST00000545026 DRAP1Q14919 205 aaPredicted RBP6.56□□□□□ -1.36
LEMD3-206ENST00000545026 PLEKHS1Q5SXH7 462 aa6.56□□□□□ -1.36
LEMD3-206ENST00000545026 CFAP58Q5T655 872 aa6.56□□□□□ -1.36
LEMD3-206ENST00000545026 HIST2H2BCQ6DN03 193 aa6.56□□□□□ -1.36
LEMD3-206ENST00000545026 HIST2H2BDQ6DRA6 164 aa6.56□□□□□ -1.36
LEMD3-206ENST00000545026 FBXO46Q6PJ61 603 aaPredicted RBP6.56□□□□□ -1.36
LEMD3-206ENST00000545026 QSOX2Q6ZRP7 698 aa6.56□□□□□ -1.36
LEMD3-206ENST00000545026 TRILQ7L0X0 811 aa6.56□□□□□ -1.36
LEMD3-206ENST00000545026 PIP4P1Q86T03 277 aa6.56□□□□□ -1.36
LEMD3-206ENST00000545026 PARP16Q8N5Y8 322 aa6.56□□□□□ -1.36
LEMD3-206ENST00000545026 ENGASEQ8NFI3 743 aa6.56□□□□□ -1.36
LEMD3-206ENST00000545026 PRSS3P2Q8NHM4 247 aa6.56□□□□□ -1.36
LEMD3-206ENST00000545026 NTN5Q8WTR8 489 aaPredicted RBP6.56□□□□□ -1.36
LEMD3-206ENST00000545026 FBXL8Q96CD0 374 aa6.56□□□□□ -1.36
LEMD3-206ENST00000545026 MSTO1Q9BUK6 570 aa6.56□□□□□ -1.36
LEMD3-206ENST00000545026 C1QTNF5Q9BXJ0 243 aa6.56□□□□□ -1.36
LEMD3-206ENST00000545026 SMARCAD1Q9H4L7 1026 aa6.56□□□□□ -1.36
LEMD3-206ENST00000545026 PDZD7Q9H5P4 517 aa6.56□□□□□ -1.36
LEMD3-206ENST00000545026 DDX4Q9NQI0 724 aaKnown RBP6.56□□□□□ -1.36
LEMD3-206ENST00000545026 MTMR6Q9Y217 621 aa6.56□□□□□ -1.36
LEMD3-206ENST00000545026 SNX8Q9Y5X2 465 aa6.56□□□□□ -1.36
LEMD3-206ENST00000545026 NKX2-2O95096 273 aa6.55□□□□□ -1.36
LEMD3-206ENST00000545026 TFPIP10646 304 aa6.55□□□□□ -1.36
LEMD3-206ENST00000545026 IL7RP16871 459 aa6.55□□□□□ -1.36
LEMD3-206ENST00000545026 MCM3P25205 808 aa6.55□□□□□ -1.36
LEMD3-206ENST00000545026 SRSF4Q08170 494 aaKnown RBP6.55□□□□□ -1.36
LEMD3-206ENST00000545026 LAMB3Q13751 1172 aa6.55□□□□□ -1.36
LEMD3-206ENST00000545026 ARHGEF6Q15052 776 aa6.55□□□□□ -1.36
LEMD3-206ENST00000545026 TRIP6Q15654 476 aaKnown RBP6.55□□□□□ -1.36
LEMD3-206ENST00000545026 DUSP6Q16828 381 aa6.55□□□□□ -1.36
LEMD3-206ENST00000545026 JADE1Q6IE81 842 aa6.55□□□□□ -1.36
LEMD3-206ENST00000545026 SLC35F3Q8IY50 421 aa6.55□□□□□ -1.36
LEMD3-206ENST00000545026 C17orf53Q8N3J3 647 aaPredicted RBP6.55□□□□□ -1.36
LEMD3-206ENST00000545026 LSMEM1Q8N8F7 131 aa6.55□□□□□ -1.36
LEMD3-206ENST00000545026 ARHGEF26Q96DR7 871 aa6.55□□□□□ -1.36
LEMD3-206ENST00000545026 TRMOQ9BU70 441 aa6.55□□□□□ -1.36
LEMD3-206ENST00000545026 MXD3Q9BW11 206 aa6.55□□□□□ -1.36
LEMD3-206ENST00000545026 NKIRAS2Q9NYR9 191 aa6.55□□□□□ -1.36
LEMD3-206ENST00000545026 RAI2Q9Y5P3 530 aa6.55□□□□□ -1.36
LEMD3-206ENST00000545026 A0A1W2PQ09 198 aa6.54□□□□□ -1.36
LEMD3-206ENST00000545026 B4DLN1 442 aa6.54□□□□□ -1.36
LEMD3-206ENST00000545026 SCAMP1O15126 338 aa6.54□□□□□ -1.36
LEMD3-206ENST00000545026 RGS11O94810 467 aa6.54□□□□□ -1.36
LEMD3-206ENST00000545026 STARD3NLO95772 234 aa6.54□□□□□ -1.36
LEMD3-206ENST00000545026 MMP2P08253 660 aa6.54□□□□□ -1.36
LEMD3-206ENST00000545026 GABRB1P18505 474 aa6.54□□□□□ -1.36
LEMD3-206ENST00000545026 SSBP2P81877 361 aaPredicted RBP6.54□□□□□ -1.36
LEMD3-206ENST00000545026 SRSF1Q07955 248 aaKnown RBP eCLIP6.54□□□□□ -1.36
LEMD3-206ENST00000545026 RAB41Q5JT25 222 aa6.54□□□□□ -1.36
LEMD3-206ENST00000545026 Q5PR19 223 aa6.54□□□□□ -1.36
LEMD3-206ENST00000545026 NUGGCQ68CJ6 796 aa6.54□□□□□ -1.36
LEMD3-206ENST00000545026 GLDNQ6ZMI3 551 aaPredicted RBP6.54□□□□□ -1.36
LEMD3-206ENST00000545026 SLC16A12Q6ZSM3 486 aa6.54□□□□□ -1.36
LEMD3-206ENST00000545026 TICAM1Q8IUC6 712 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms