RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 HLA-DQA2P01906 255 aa5.21□□□□□ -1.58
HMGB3P5-201ENST00000428894 GSTM2P28161 218 aa5.21□□□□□ -1.58
HMGB3P5-201ENST00000428894 ALKBH1Q13686 389 aaKnown RBP5.21□□□□□ -1.58
HMGB3P5-201ENST00000428894 DUSP6Q16828 381 aa5.21□□□□□ -1.58
HMGB3P5-201ENST00000428894 ZACNQ401N2 412 aa5.21□□□□□ -1.58
HMGB3P5-201ENST00000428894 MAP9Q49MG5 647 aa5.21□□□□□ -1.58
HMGB3P5-201ENST00000428894 NADSYN1Q6IA69 706 aa5.21□□□□□ -1.58
HMGB3P5-201ENST00000428894 RAB11FIP2Q7L804 512 aa5.21□□□□□ -1.58
HMGB3P5-201ENST00000428894 ZNF367Q7RTV3 350 aa5.21□□□□□ -1.58
HMGB3P5-201ENST00000428894 ARMC9Q7Z3E5 817 aa5.21□□□□□ -1.58
HMGB3P5-201ENST00000428894 CCDC117Q8IWD4 279 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P5-201ENST00000428894 VPS52Q8N1B4 723 aa5.21□□□□□ -1.58
HMGB3P5-201ENST00000428894 AGBL3Q8NEM8 1001 aa5.21□□□□□ -1.58
HMGB3P5-201ENST00000428894 SCAMP5Q8TAC9 235 aa5.21□□□□□ -1.58
HMGB3P5-201ENST00000428894 KCNJ9Q92806 393 aa5.21□□□□□ -1.58
HMGB3P5-201ENST00000428894 TRIM31Q9BZY9 425 aa5.21□□□□□ -1.58
HMGB3P5-201ENST00000428894 DBNDD1Q9H9R9 158 aa5.21□□□□□ -1.58
HMGB3P5-201ENST00000428894 CD93Q9NPY3 652 aa5.21□□□□□ -1.58
HMGB3P5-201ENST00000428894 TMEM248Q9NWD8 314 aa5.21□□□□□ -1.58
HMGB3P5-201ENST00000428894 HTTP42858 3142 aa5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 MS4A18H0YCH9 400 aa5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 LIASO43766 372 aa5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 ECE2O60344 883 aa5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 SKAP2O75563 359 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 MYL6BP14649 208 aa5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 SERPINB3P29508 390 aa5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 PRKAR2BP31323 418 aa5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 AP2B1P63010 937 aa5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 DSC1Q08554 894 aa5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 GALNTL6Q49A17 601 aa5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 C5orf22Q49AR2 442 aa5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 FSCBQ5H9T9 825 aa5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 PRAMEF19Q5SWL8 479 aa5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 TMEM71Q6P5X7 295 aa5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 KLHL17Q6TDP4 642 aa5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 Q6ZSV7 163 aa5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 MCM10Q7L590 875 aa5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 RNF144BQ7Z419 303 aa5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 RBM23Q86U06 439 aaKnown RBP5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 SVIPQ8NHG7 77 aa5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 BICD2Q8TD16 824 aa5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 SLC2A12Q8TD20 617 aa5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 CPT1BQ92523 772 aa5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 ARRDC3Q96B67 414 aa5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 C3orf49Q96BT1 292 aa5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 LMLNQ96KR4 655 aa5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 CFAP53Q96M91 514 aa5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 PIGSQ96S52 555 aa5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 WDR12Q9GZL7 423 aaKnown RBP5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 MYOZ2Q9NPC6 264 aa5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 CHST12Q9NRB3 414 aa5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 PLEKHB1Q9UF11 243 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 TRMT112Q9UI30 125 aaKnown RBP5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 C19orf53Q9UNZ5 99 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 SH3TC1Q8TE82 1336 aa5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 DDX60Q8IY21 1712 aaKnown RBP5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 CUL9Q8IWT3 2517 aa5.2□□□□□ -1.58
HMGB3P5-201ENST00000428894 LAMB4A4D0S4 1761 aa5.19□□□□□ -1.58
HMGB3P5-201ENST00000428894 NPIPB13A6NJU9 1138 aa5.19□□□□□ -1.58
HMGB3P5-201ENST00000428894 NPIPB5A8MRT5 1133 aa5.19□□□□□ -1.58
HMGB3P5-201ENST00000428894 NPIPB4C9JG80 1138 aa5.19□□□□□ -1.58
HMGB3P5-201ENST00000428894 PRSS2P07478 247 aa5.19□□□□□ -1.58
HMGB3P5-201ENST00000428894 TYK2P29597 1187 aa5.19□□□□□ -1.58
HMGB3P5-201ENST00000428894 DEKP35659 375 aaKnown RBP5.19□□□□□ -1.58
HMGB3P5-201ENST00000428894 AVPR1AP37288 418 aa5.19□□□□□ -1.58
HMGB3P5-201ENST00000428894 SP3Q02447 781 aa5.19□□□□□ -1.58
HMGB3P5-201ENST00000428894 TNFAIP2Q03169 654 aa5.19□□□□□ -1.58
HMGB3P5-201ENST00000428894 PUM3Q15397 648 aaKnown RBP5.19□□□□□ -1.58
HMGB3P5-201ENST00000428894 TTC22Q5TAA0 569 aa5.19□□□□□ -1.58
HMGB3P5-201ENST00000428894 HEPHL1Q6MZM0 1159 aa5.19□□□□□ -1.58
HMGB3P5-201ENST00000428894 HORMAD2Q8N7B1 307 aa5.19□□□□□ -1.58
HMGB3P5-201ENST00000428894 ATG16L2Q8NAA4 619 aa5.19□□□□□ -1.58
HMGB3P5-201ENST00000428894 ADAMTS14Q8WXS8 1223 aa5.19□□□□□ -1.58
HMGB3P5-201ENST00000428894 TM6SF1Q9BZW5 370 aa5.19□□□□□ -1.58
HMGB3P5-201ENST00000428894 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.19□□□□□ -1.58
HMGB3P5-201ENST00000428894 CDT1Q9H211 546 aa5.19□□□□□ -1.58
HMGB3P5-201ENST00000428894 PABPC3Q9H361 631 aaKnown RBP5.19□□□□□ -1.58
HMGB3P5-201ENST00000428894 PRDM8Q9NQV8 689 aa5.19□□□□□ -1.58
HMGB3P5-201ENST00000428894 POLLQ9UGP5 575 aa5.19□□□□□ -1.58
HMGB3P5-201ENST00000428894 CDH22Q9UJ99 828 aa5.19□□□□□ -1.58
HMGB3P5-201ENST00000428894 BAG5Q9UL15 447 aa5.19□□□□□ -1.58
HMGB3P5-201ENST00000428894 RCE1Q9Y256 329 aa5.19□□□□□ -1.58
HMGB3P5-201ENST00000428894 TAF1P21675 1872 aa5.19□□□□□ -1.58
HMGB3P5-201ENST00000428894 RANBP2P49792 3224 aaKnown RBP5.19□□□□□ -1.58
HMGB3P5-201ENST00000428894 ZNF609O15014 1411 aa5.18□□□□□ -1.58
HMGB3P5-201ENST00000428894 CLEC18AA5D8T8 446 aa5.18□□□□□ -1.58
HMGB3P5-201ENST00000428894 SYT5O00445 386 aa5.18□□□□□ -1.58
HMGB3P5-201ENST00000428894 WDHD1O75717 1129 aaPredicted RBP5.18□□□□□ -1.58
HMGB3P5-201ENST00000428894 TMCC1O94876 653 aa5.18□□□□□ -1.58
HMGB3P5-201ENST00000428894 GLUD1P00367 558 aa5.18□□□□□ -1.58
HMGB3P5-201ENST00000428894 SETSIPP0DME0 302 aa5.18□□□□□ -1.58
HMGB3P5-201ENST00000428894 FCGR2AP12318 317 aa5.18□□□□□ -1.58
HMGB3P5-201ENST00000428894 UNGP13051 313 aaPredicted RBP5.18□□□□□ -1.58
HMGB3P5-201ENST00000428894 SERPINA4P29622 427 aa5.18□□□□□ -1.58
HMGB3P5-201ENST00000428894 PDIA3P30101 505 aaKnown RBP5.18□□□□□ -1.58
HMGB3P5-201ENST00000428894 SERPINF1P36955 418 aa5.18□□□□□ -1.58
HMGB3P5-201ENST00000428894 PPP3CCP48454 512 aa5.18□□□□□ -1.58
HMGB3P5-201ENST00000428894 GLUD2P49448 558 aa5.18□□□□□ -1.58
HMGB3P5-201ENST00000428894 PNLIPRP1P54315 467 aa5.18□□□□□ -1.58
HMGB3P5-201ENST00000428894 RPS8P62241 208 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms