RNA–Protein interactions for RNA: ENST00000285814.8

NIFK-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIFK, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-201ENST00000285814 TREX1Q9NSU2 369 aa18.46■□□□□ 0.55
NIFK-201ENST00000285814 LGALS13Q9UHV8 139 aa18.46■□□□□ 0.55
NIFK-201ENST00000285814 RPL26L1Q9UNX3 145 aaKnown RBP18.46■□□□□ 0.55
NIFK-201ENST00000285814 PCDHB9Q9Y5E1 797 aa18.46■□□□□ 0.55
NIFK-201ENST00000285814 TBC1D3BA6NDS4 549 aa18.45■□□□□ 0.54
NIFK-201ENST00000285814 PIAS1O75925 651 aa18.45■□□□□ 0.54
NIFK-201ENST00000285814 PRKCGP05129 697 aa18.45■□□□□ 0.54
NIFK-201ENST00000285814 RECQLP46063 649 aaPredicted RBP18.45■□□□□ 0.54
NIFK-201ENST00000285814 GRIA4P48058 902 aa18.45■□□□□ 0.54
NIFK-201ENST00000285814 RAD51Q06609 339 aa18.45■□□□□ 0.54
NIFK-201ENST00000285814 LAMB3Q13751 1172 aa18.45■□□□□ 0.54
NIFK-201ENST00000285814 QPCTQ16769 361 aa18.45■□□□□ 0.54
NIFK-201ENST00000285814 LEXMQ3ZCV2 418 aa18.45■□□□□ 0.54
NIFK-201ENST00000285814 AGBL2Q5U5Z8 902 aa18.45■□□□□ 0.54
NIFK-201ENST00000285814 NLRP9Q7RTR0 991 aa18.45■□□□□ 0.54
NIFK-201ENST00000285814 PIH1D2Q8WWB5 315 aa18.45■□□□□ 0.54
NIFK-201ENST00000285814 ATP6V1G3Q96LB4 118 aa18.45■□□□□ 0.54
NIFK-201ENST00000285814 CENPHQ9H3R5 247 aa18.45■□□□□ 0.54
NIFK-201ENST00000285814 CTNNAL1Q9UBT7 734 aa18.45■□□□□ 0.54
NIFK-201ENST00000285814 CXorf49A8MYA2 514 aaPredicted RBP18.44■□□□□ 0.54
NIFK-201ENST00000285814 RGS16O15492 202 aaPredicted RBP18.44■□□□□ 0.54
NIFK-201ENST00000285814 LDB2O43679 373 aa18.44■□□□□ 0.54
NIFK-201ENST00000285814 BNIP3LO60238 219 aa18.44■□□□□ 0.54
NIFK-201ENST00000285814 RNF40O75150 1001 aa18.44■□□□□ 0.54
NIFK-201ENST00000285814 PAPSS2O95340 614 aaPredicted RBP18.44■□□□□ 0.54
NIFK-201ENST00000285814 SOX9P48436 509 aa18.44■□□□□ 0.54
NIFK-201ENST00000285814 TNFAIP8L3Q5GJ75 292 aa18.44■□□□□ 0.54
NIFK-201ENST00000285814 TSTD2Q5T7W7 516 aa18.44■□□□□ 0.54
NIFK-201ENST00000285814 LRRC6Q86X45 466 aa18.44■□□□□ 0.54
NIFK-201ENST00000285814 SUGP1Q8IWZ8 645 aaKnown RBP18.44■□□□□ 0.54
NIFK-201ENST00000285814 KRT222Q8N1A0 295 aa18.44■□□□□ 0.54
NIFK-201ENST00000285814 CHST14Q8NCH0 376 aa18.44■□□□□ 0.54
NIFK-201ENST00000285814 BLOC1S5Q8TDH9 187 aa18.44■□□□□ 0.54
NIFK-201ENST00000285814 UCMAQ8WVF2 138 aa18.44■□□□□ 0.54
NIFK-201ENST00000285814 SLC44A1Q8WWI5 657 aa18.44■□□□□ 0.54
NIFK-201ENST00000285814 SPOCK2Q92563 424 aa18.44■□□□□ 0.54
NIFK-201ENST00000285814 PTPRN2Q92932 1015 aa18.44■□□□□ 0.54
NIFK-201ENST00000285814 PEX13Q92968 403 aa18.44■□□□□ 0.54
NIFK-201ENST00000285814 ECHDC3Q96DC8 303 aa18.44■□□□□ 0.54
NIFK-201ENST00000285814 ZNF641Q96N77 438 aaPredicted RBP18.44■□□□□ 0.54
NIFK-201ENST00000285814 ZDHHC6Q9H6R6 413 aa18.44■□□□□ 0.54
NIFK-201ENST00000285814 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.44■□□□□ 0.544e-9■■■■■ 30.8
NIFK-201ENST00000285814 OGFRQ9NZT2 677 aa18.44■□□□□ 0.54
NIFK-201ENST00000285814 PSMC3IPQ9P2W1 217 aaPredicted RBP18.44■□□□□ 0.54
NIFK-201ENST00000285814 LIMD1Q9UGP4 676 aa18.44■□□□□ 0.54
NIFK-201ENST00000285814 SPO11Q9Y5K1 396 aa18.44■□□□□ 0.54
NIFK-201ENST00000285814 PRUNE2Q8WUY3 3088 aa18.44■□□□□ 0.54
NIFK-201ENST00000285814 CCDC78A2IDD5 438 aa18.43■□□□□ 0.54
NIFK-201ENST00000285814 HMGB1P1B2RPK0 211 aaPredicted RBP18.43■□□□□ 0.54
NIFK-201ENST00000285814 APODP05090 189 aa18.43■□□□□ 0.54
NIFK-201ENST00000285814 PIRTP0C851 137 aa18.43■□□□□ 0.54
NIFK-201ENST00000285814 OAS2P29728 719 aaKnown RBP18.43■□□□□ 0.54
NIFK-201ENST00000285814 MGAT5Q09328 741 aa18.43■□□□□ 0.54
NIFK-201ENST00000285814 ZNF234Q14588 700 aa18.43■□□□□ 0.54
NIFK-201ENST00000285814 FNDC3BQ53EP0 1204 aaKnown RBP18.43■□□□□ 0.54
NIFK-201ENST00000285814 KIAA0930Q6ICG6 404 aaPredicted RBP18.43■□□□□ 0.54
NIFK-201ENST00000285814 ESRP1Q6NXG1 681 aaKnown RBP18.43■□□□□ 0.54
NIFK-201ENST00000285814 ADGRD1Q6QNK2 874 aa18.43■□□□□ 0.54
NIFK-201ENST00000285814 SLC44A3Q8N4M1 653 aa18.43■□□□□ 0.54
NIFK-201ENST00000285814 DCAKDQ8WVC6 231 aa18.43■□□□□ 0.54
NIFK-201ENST00000285814 HEPHQ9BQS7 1158 aa18.43■□□□□ 0.54
NIFK-201ENST00000285814 TMEM245Q9H330 911 aa18.43■□□□□ 0.54
NIFK-201ENST00000285814 SLC2A6Q9UGQ3 507 aa18.43■□□□□ 0.54
NIFK-201ENST00000285814 RIMKLBQ9ULI2 386 aa18.43■□□□□ 0.54
NIFK-201ENST00000285814 MSH2P43246 934 aa18.43■□□□□ 0.54
NIFK-201ENST00000285814 EPHB1P54762 984 aa18.43■□□□□ 0.54
NIFK-201ENST00000285814 NAB1Q13506 487 aa18.43■□□□□ 0.54
NIFK-201ENST00000285814 HNRNPA1L2Q32P51 320 aaKnown RBP18.43■□□□□ 0.54
NIFK-201ENST00000285814 NUDT18Q6ZVK8 323 aa18.43■□□□□ 0.54
NIFK-201ENST00000285814 MARK2Q7KZI7 788 aaKnown RBP18.43■□□□□ 0.54
NIFK-201ENST00000285814 CTAGE3PQ8IX95 158 aa18.43■□□□□ 0.54
NIFK-201ENST00000285814 PPM1NQ8N819 430 aa18.43■□□□□ 0.54
NIFK-201ENST00000285814 CDKL2Q92772 493 aa18.43■□□□□ 0.54
NIFK-201ENST00000285814 DNASE1L2Q92874 299 aa18.43■□□□□ 0.54
NIFK-201ENST00000285814 TLCD1Q96CP7 247 aa18.43■□□□□ 0.54
NIFK-201ENST00000285814 P2RY13Q9BPV8 354 aa18.43■□□□□ 0.54
NIFK-201ENST00000285814 SUV39H2Q9H5I1 410 aa18.43■□□□□ 0.54
NIFK-201ENST00000285814 FBRSL1Q9HCM7 1045 aaKnown RBP18.43■□□□□ 0.54
NIFK-201ENST00000285814 PPANQ9NQ55 473 aaKnown RBP18.43■□□□□ 0.54
NIFK-201ENST00000285814 IL1RAPL1Q9NZN1 696 aa18.43■□□□□ 0.54
NIFK-201ENST00000285814 THAP10Q9P2Z0 257 aaPredicted RBP18.43■□□□□ 0.54
NIFK-201ENST00000285814 HCN2Q9UL51 889 aa18.43■□□□□ 0.54
NIFK-201ENST00000285814 STARD13Q9Y3M8 1113 aa18.43■□□□□ 0.54
NIFK-201ENST00000285814 ARL5AQ9Y689 179 aa18.43■□□□□ 0.54
NIFK-201ENST00000285814 WASF2Q9Y6W5 498 aa18.43■□□□□ 0.54
NIFK-201ENST00000285814 CRTAMO95727 393 aa18.42■□□□□ 0.54
NIFK-201ENST00000285814 ERVK-10P10266 1014 aa18.42■□□□□ 0.54
NIFK-201ENST00000285814 BMP1P13497 986 aa18.42■□□□□ 0.54
NIFK-201ENST00000285814 PAMP19021 973 aa18.42■□□□□ 0.54
NIFK-201ENST00000285814 ARNTP27540 789 aa18.42■□□□□ 0.54
NIFK-201ENST00000285814 SLC8A1P32418 973 aa18.42■□□□□ 0.54
NIFK-201ENST00000285814 CTHP32929 405 aa18.42■□□□□ 0.54
NIFK-201ENST00000285814 ARCN1P48444 511 aaKnown RBP18.42■□□□□ 0.54
NIFK-201ENST00000285814 ACVR1Q04771 509 aa18.42■□□□□ 0.54
NIFK-201ENST00000285814 TAF1AQ15573 450 aaPredicted RBP18.42■□□□□ 0.54
NIFK-201ENST00000285814 CNGA3Q16281 694 aa18.42■□□□□ 0.54
NIFK-201ENST00000285814 KCTD16Q68DU8 428 aa18.42■□□□□ 0.54
NIFK-201ENST00000285814 PDPK2PQ6A1A2 396 aa18.42■□□□□ 0.54
NIFK-201ENST00000285814 KCNMB4Q86W47 210 aa18.42■□□□□ 0.54
NIFK-201ENST00000285814 SLC26A11Q86WA9 606 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms