RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Dnajc3Q91YW3 504 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Sytl1Q99N80 567 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Psmd9Q9CR00 222 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Fcf1Q9CTH6 198 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Vps28Q9D1C8 221 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 CasrQ9QY96 1079 aa14.91□□□□□ -0.02
Nup88-202ENSMUST00000108530 Igkv10-94A0A075B5L1 115 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 Kpna7C0LLJ0 499 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 Mpp1P70290 466 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 Meaf6Q2VPQ9 191 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 Ino80dQ66JY2 873 aaKnown RBP14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 Ppp1r26Q6A025 1163 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 Lemd2Q6DVA0 511 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 Q6GQU0 248 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 Ggnbp1Q6K1E7 370 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 Ptk7Q8BKG3 1062 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 Rbm34Q8C5L7 375 aaKnown RBP14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 Cyp2c70Q91W64 489 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 Ten1Q9D7K2 161 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 Olfr703Q9EPF5 319 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 RhojQ9ER71 214 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 Smad9Q9JIW5 430 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 RlfA2A7F4 1918 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 FscbA1EGX6 1074 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 Ldb2O55203 373 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 Gja1P23242 382 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 Nfkb1P25799 971 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 Casp2P29594 452 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 CskP41241 450 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 SmoP56726 793 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 Cd244Q07763 397 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 March9Q3TZ87 348 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 Chi3l1Q61362 389 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 Hbs1lQ69ZS7 682 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 Syt14Q7TN84 555 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 H2-M10.2Q85ZW9 329 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 Gabra5Q8BHJ7 463 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 Ccdc184Q8BMK5 191 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 Clptm1lQ8BXA5 539 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 Dclre1bQ8C7W7 541 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 Impg1Q8R1W8 798 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 Cadm1Q8R5M8 456 aaKnown RBP14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 TgdsQ8VDR7 355 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 VitQ8VHI5 650 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 Ndufaf1Q9CWX2 328 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 Duoxa2Q9D311 320 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 Kctd4Q9D7X1 259 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 Pias4Q9JM05 507 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 H2afb2S4R1M3 115 aa14.9□□□□□ -0.02
Nup88-202ENSMUST00000108530 Pdzd7E9Q9W7 1021 aa14.89□□□□□ -0.03
Nup88-202ENSMUST00000108530 Vmn1r76F8VQ63 324 aa14.89□□□□□ -0.03
Nup88-202ENSMUST00000108530 Gm20828J3KMI7 228 aa14.89□□□□□ -0.03
Nup88-202ENSMUST00000108530 Tnk2O54967 1055 aa14.89□□□□□ -0.03
Nup88-202ENSMUST00000108530 Igf2bp1O88477 577 aaKnown RBP14.89□□□□□ -0.03
Nup88-202ENSMUST00000108530 Camk4P08414 469 aa14.89□□□□□ -0.03
Nup88-202ENSMUST00000108530 Fen1P39749 378 aa14.89□□□□□ -0.03
Nup88-202ENSMUST00000108530 WasP70315 520 aa14.89□□□□□ -0.03
Nup88-202ENSMUST00000108530 Foxr1Q3UTB7 268 aa14.89□□□□□ -0.03
Nup88-202ENSMUST00000108530 Scaf4Q6PFF0 1209 aaKnown RBP14.89□□□□□ -0.03
Nup88-202ENSMUST00000108530 C2cd2lQ80X80 706 aa14.89□□□□□ -0.03
Nup88-202ENSMUST00000108530 Ccdc50Q810U5 305 aaKnown RBP14.89□□□□□ -0.03
Nup88-202ENSMUST00000108530 Elmo2Q8BHL5 732 aa14.89□□□□□ -0.03
Nup88-202ENSMUST00000108530 Olfm2Q8BM13 448 aa14.89□□□□□ -0.03
Nup88-202ENSMUST00000108530 Mta1Q8K4B0 715 aaKnown RBP14.89□□□□□ -0.03
Nup88-202ENSMUST00000108530 Mrpl57Q9CQF8 102 aaKnown RBP14.89□□□□□ -0.03
Nup88-202ENSMUST00000108530 Slc22a17Q9D9E0 401 aa14.89□□□□□ -0.03
Nup88-202ENSMUST00000108530 Cyb561d2Q9WUE3 222 aa14.89□□□□□ -0.03
Nup88-202ENSMUST00000108530 Top3bQ9Z321 862 aaKnown RBP14.89□□□□□ -0.03
Nup88-202ENSMUST00000108530 KcpQ3U492 1550 aa14.89□□□□□ -0.03
Nup88-202ENSMUST00000108530 PikfyveQ9Z1T6 2097 aa14.89□□□□□ -0.03
Nup88-202ENSMUST00000108530 Raph1F2Z3U3 1266 aa14.89□□□□□ -0.03
Nup88-202ENSMUST00000108530 Cyp2j6O54750 501 aa14.89□□□□□ -0.03
Nup88-202ENSMUST00000108530 Man1a1P45700 655 aa14.89□□□□□ -0.03
Nup88-202ENSMUST00000108530 Cyb5r2Q3KNK3 276 aa14.89□□□□□ -0.03
Nup88-202ENSMUST00000108530 Prmt9Q3U3W5 846 aa14.89□□□□□ -0.03
Nup88-202ENSMUST00000108530 Spata48Q5NC83 441 aa14.89□□□□□ -0.03
Nup88-202ENSMUST00000108530 Klra8Q60682 266 aa14.89□□□□□ -0.03
Nup88-202ENSMUST00000108530 Nfe2l1Q61985 741 aa14.89□□□□□ -0.03
Nup88-202ENSMUST00000108530 Cntn4Q69Z26 1026 aa14.89□□□□□ -0.03
Nup88-202ENSMUST00000108530 Gm7247Q6UY52 187 aa14.89□□□□□ -0.03
Nup88-202ENSMUST00000108530 Atg10Q8R1P4 215 aa14.89□□□□□ -0.03
Nup88-202ENSMUST00000108530 Emid1Q91VF5 444 aa14.89□□□□□ -0.03
Nup88-202ENSMUST00000108530 Efhc2Q9D485 750 aa14.89□□□□□ -0.03
Nup88-202ENSMUST00000108530 Cyp2c55Q9D816 490 aa14.89□□□□□ -0.03
Nup88-202ENSMUST00000108530 Tbc1d20Q9D9I4 402 aa14.89□□□□□ -0.03
Nup88-202ENSMUST00000108530 Sgo2bJ3QMK1 1167 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 DldO08749 509 aaKnown RBP14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 PargO88622 969 aaKnown RBP14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Alas2P08680 587 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Hmx2P43687 273 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Taar7eQ5QD09 358 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 LpoQ5SW46 710 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 ScinQ60604 715 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Atp11bQ6DFW5 1175 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Ints7Q7TQK1 966 aaKnown RBP14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Insig1Q8BGI3 259 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Tceal5Q8CCT4 200 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Tbrg4Q91YM4 630 aaKnown RBP14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 SncbQ91ZZ3 133 aa14.88□□□□□ -0.03
Nup88-202ENSMUST00000108530 Ppp2r2dQ925E7 453 aa14.88□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 185.5 ms