Protein–RNA interactions for Protein: P41241

Csk, Tyrosine-protein kinase CSK, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CskP41241 Gm25239-201ENSMUST00000174915 86 ntBASIC38.73■■■■□ 3.79
CskP41241 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.76■■■■□ 3.32
CskP41241 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
CskP41241 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
CskP41241 Gm15042-201ENSMUST00000120212 883 ntBASIC33.96■■■■□ 3.03
CskP41241 Gm24109-201ENSMUST00000175489 103 ntBASIC33.5■■■□□ 2.95
CskP41241 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
CskP41241 Gm15045-201ENSMUST00000117359 883 ntBASIC33.24■■■□□ 2.91
CskP41241 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.01■■■□□ 2.88
CskP41241 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
CskP41241 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.68■■■□□ 2.82
CskP41241 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
CskP41241 Gm23366-201ENSMUST00000175022 89 ntBASIC32.35■■■□□ 2.77
CskP41241 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
CskP41241 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
CskP41241 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.8■■■□□ 2.68
CskP41241 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CskP41241 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
CskP41241 Psd-208ENSMUST00000224556 2034 ntBASIC31.51■■■□□ 2.63
CskP41241 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CskP41241 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CskP41241 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
CskP41241 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
CskP41241 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
CskP41241 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.6
CskP41241 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.2■■■□□ 2.59
CskP41241 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CskP41241 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.07■■■□□ 2.56
CskP41241 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.04■■■□□ 2.56
CskP41241 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
CskP41241 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.85■■■□□ 2.53
CskP41241 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CskP41241 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CskP41241 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CskP41241 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CskP41241 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.58■■■□□ 2.49
CskP41241 Gm25238-201ENSMUST00000174914 89 ntBASIC30.54■■■□□ 2.48
CskP41241 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CskP41241 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.5■■■□□ 2.47
CskP41241 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
CskP41241 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CskP41241 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CskP41241 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.02■■■□□ 2.4
CskP41241 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CskP41241 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
CskP41241 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.94■■■□□ 2.38
CskP41241 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
CskP41241 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CskP41241 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.87■■■□□ 2.37
CskP41241 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.8■■■□□ 2.36
CskP41241 Gm27325-201ENSMUST00000175467 74 ntBASIC29.78■■■□□ 2.36
CskP41241 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
CskP41241 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
CskP41241 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
CskP41241 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.6■■■□□ 2.33
CskP41241 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
CskP41241 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.49■■■□□ 2.31
CskP41241 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.48■■■□□ 2.31
CskP41241 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.48■■■□□ 2.31
CskP41241 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CskP41241 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CskP41241 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
CskP41241 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.34■■■□□ 2.29
CskP41241 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CskP41241 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.32■■■□□ 2.28
CskP41241 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CskP41241 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
CskP41241 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CskP41241 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CskP41241 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CskP41241 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CskP41241 Gm25262-201ENSMUST00000174934 133 ntBASIC29.19■■■□□ 2.26
CskP41241 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.18■■■□□ 2.26
CskP41241 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CskP41241 Rab21-202ENSMUST00000218831 843 ntBASIC29.16■■■□□ 2.26
CskP41241 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.09■■■□□ 2.25
CskP41241 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.06■■■□□ 2.24
CskP41241 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.99■■■□□ 2.23
CskP41241 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.98■■■□□ 2.23
CskP41241 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
CskP41241 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
CskP41241 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.92■■■□□ 2.22
CskP41241 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
CskP41241 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.84■■■□□ 2.21
CskP41241 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.77■■■□□ 2.2
CskP41241 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28.77■■■□□ 2.2
CskP41241 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
CskP41241 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
CskP41241 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
CskP41241 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.68■■■□□ 2.18
CskP41241 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CskP41241 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.67■■■□□ 2.18
CskP41241 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.63■■■□□ 2.17
CskP41241 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.59■■■□□ 2.17
CskP41241 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CskP41241 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
CskP41241 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
CskP41241 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.47■■■□□ 2.15
CskP41241 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CskP41241 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms