RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C SPO22P40511 975 aa6.85□□□□□ -1.31
VPS4YPR173C FRK1Q03002 865 aaPredicted RBP6.85□□□□□ -1.31
VPS4YPR173C DDP1Q99321 188 aaKnown RBP6.85□□□□□ -1.31
VPS4YPR173C PDR18P53756 1333 aa6.84□□□□□ -1.31
VPS4YPR173C RDS2P19541 446 aaKnown RBP6.84□□□□□ -1.31
VPS4YPR173C MBR1P23493 339 aa6.84□□□□□ -1.31
VPS4YPR173C KIP2P28743 706 aa6.84□□□□□ -1.31
VPS4YPR173C MFT1P33441 392 aaKnown RBP6.84□□□□□ -1.31
VPS4YPR173C CST6P40535 587 aa6.84□□□□□ -1.31
VPS4YPR173C SSL2Q00578 843 aa6.84□□□□□ -1.31
VPS4YPR173C PUS5Q06244 254 aa6.84□□□□□ -1.31
VPS4YPR173C PSK2Q08217 1101 aa6.84□□□□□ -1.31
VPS4YPR173C TRS33Q99394 268 aa6.84□□□□□ -1.31
VPS4YPR173C SES1P07284 462 aaKnown RBP6.83□□□□□ -1.32
VPS4YPR173C AMS1P22855 1083 aa6.83□□□□□ -1.32
VPS4YPR173C SSF1P38789 453 aaPredicted RBP6.83□□□□□ -1.32
VPS4YPR173C ATG3P40344 310 aa6.83□□□□□ -1.32
VPS4YPR173C DNM1P54861 757 aa6.83□□□□□ -1.32
VPS4YPR173C RMD1Q03441 430 aa6.83□□□□□ -1.32
VPS4YPR173C YPL150WQ12152 901 aa6.83□□□□□ -1.32
VPS4YPR173C SSA1P10591 642 aaKnown RBP6.82□□□□□ -1.32
VPS4YPR173C KTR7P40504 517 aa6.82□□□□□ -1.32
VPS4YPR173C APL6P46682 809 aa6.82□□□□□ -1.32
VPS4YPR173C CTF18P49956 741 aa6.82□□□□□ -1.32
VPS4YPR173C MLC1P53141 149 aa6.82□□□□□ -1.32
VPS4YPR173C MRPS35P53292 345 aa6.82□□□□□ -1.32
VPS4YPR173C SYH1Q02875 849 aaKnown RBP6.82□□□□□ -1.32
VPS4YPR173C SGD1Q06132 899 aa6.82□□□□□ -1.32
VPS4YPR173C ELG1Q12050 791 aa6.82□□□□□ -1.32
VPS4YPR173C NOP14Q99207 810 aaKnown RBP6.82□□□□□ -1.32
VPS4YPR173C PET111P08468 800 aa6.81□□□□□ -1.32
VPS4YPR173C MRC1P25588 1096 aa6.81□□□□□ -1.32
VPS4YPR173C PEP12P32854 288 aa6.81□□□□□ -1.32
VPS4YPR173C IXR1P33417 597 aa6.81□□□□□ -1.32
VPS4YPR173C MNR2P35724 969 aa6.81□□□□□ -1.32
VPS4YPR173C TFG2P41896 400 aaPredicted RBP6.81□□□□□ -1.32
VPS4YPR173C YJR008WP47085 338 aa6.81□□□□□ -1.32
VPS4YPR173C YIL177CP40434 1758 aa6.81□□□□□ -1.32
VPS4YPR173C YJL225CP40889 1758 aa6.81□□□□□ -1.32
VPS4YPR173C TY4B-HP0C2J7 1802 aa6.8□□□□□ -1.32
VPS4YPR173C TY4B-JP47024 1803 aa6.8□□□□□ -1.32
VPS4YPR173C CPA2P03965 1118 aaKnown RBP6.8□□□□□ -1.32
VPS4YPR173C RDS1P25611 832 aa6.8□□□□□ -1.32
VPS4YPR173C SPC110P32380 944 aa6.8□□□□□ -1.32
VPS4YPR173C NUP133P36161 1157 aa6.8□□□□□ -1.32
VPS4YPR173C TGL4P36165 910 aa6.8□□□□□ -1.32
VPS4YPR173C UBP12P39538 1254 aa6.8□□□□□ -1.32
VPS4YPR173C JSN1P47135 1091 aaKnown RBP RIP-Chip data6.8□□□□□ -1.32not detected
VPS4YPR173C YGL242CP53066 181 aa6.8□□□□□ -1.32
VPS4YPR173C UTP13Q05946 817 aaKnown RBP6.8□□□□□ -1.32
VPS4YPR173C NOB1Q08444 459 aaKnown RBP6.8□□□□□ -1.32
VPS4YPR173C PUP1P25043 261 aa6.79□□□□□ -1.32
VPS4YPR173C DEP1P31385 405 aa6.79□□□□□ -1.32
VPS4YPR173C MAL33P38157 468 aa6.79□□□□□ -1.32
VPS4YPR173C SOH1P38633 127 aa6.79□□□□□ -1.32
VPS4YPR173C YHL017WP38745 532 aa6.79□□□□□ -1.32
VPS4YPR173C RRM3P38766 723 aa6.79□□□□□ -1.32
VPS4YPR173C ARP5P53946 755 aa6.79□□□□□ -1.32
VPS4YPR173C ALO1P54783 526 aaKnown RBP6.79□□□□□ -1.32
VPS4YPR173C URB1P34241 1764 aaKnown RBP6.79□□□□□ -1.32
VPS4YPR173C FKS3Q04952 1785 aa6.79□□□□□ -1.32
VPS4YPR173C GPA1P08539 472 aa6.78□□□□□ -1.32
VPS4YPR173C YPT11P48559 417 aa6.78□□□□□ -1.32
VPS4YPR173C HED1Q03937 162 aa6.78□□□□□ -1.32
VPS4YPR173C SLM3Q12093 417 aa6.78□□□□□ -1.32
VPS4YPR173C SWI1P09547 1314 aa6.78□□□□□ -1.32
VPS4YPR173C LPD1P09624 499 aaKnown RBP6.77□□□□□ -1.32
VPS4YPR173C GEF1P37020 779 aa6.77□□□□□ -1.32
VPS4YPR173C STM1P39015 273 aaKnown RBP6.77□□□□□ -1.32
VPS4YPR173C CTH1P47976 325 aa6.77□□□□□ -1.32
VPS4YPR173C ZDS2P54786 942 aa6.77□□□□□ -1.32
VPS4YPR173C CLB1P24868 471 aa6.76□□□□□ -1.33
VPS4YPR173C GSY2P27472 705 aa6.76□□□□□ -1.33
VPS4YPR173C RFT1P38206 574 aaPredicted RBP6.76□□□□□ -1.33
VPS4YPR173C YER130CP39959 443 aa6.76□□□□□ -1.33
VPS4YPR173C YML083CQ04526 418 aa6.76□□□□□ -1.33
VPS4YPR173C COG4Q06096 861 aa6.76□□□□□ -1.33
VPS4YPR173C PRP5P21372 849 aaPredicted RBP6.76□□□□□ -1.33
VPS4YPR173C KTR3P38130 404 aaPredicted RBP6.76□□□□□ -1.33
VPS4YPR173C RIX1P38883 763 aaPredicted RBP6.76□□□□□ -1.33
VPS4YPR173C EMW1P42842 904 aaKnown RBP6.76□□□□□ -1.33
VPS4YPR173C ENT3P47160 408 aa6.76□□□□□ -1.33
VPS4YPR173C PRP31P49704 494 aaPredicted RBP6.76□□□□□ -1.33
VPS4YPR173C YKE2P52553 114 aa6.76□□□□□ -1.33
VPS4YPR173C APP1P53933 587 aa6.76□□□□□ -1.33
VPS4YPR173C RPL34AP87262 121 aaPredicted RBP6.76□□□□□ -1.33
VPS4YPR173C MRS2Q01926 470 aa6.76□□□□□ -1.33
VPS4YPR173C RNT1Q02555 471 aa6.76□□□□□ -1.33
VPS4YPR173C MEC3Q02574 474 aa6.76□□□□□ -1.33
VPS4YPR173C ECM23Q02710 187 aa6.76□□□□□ -1.33
VPS4YPR173C INP54Q08227 384 aaKnown RBP6.76□□□□□ -1.33
VPS4YPR173C ALE1Q08548 619 aa6.76□□□□□ -1.33
VPS4YPR173C MATALPHA2P0CY08 210 aa6.75□□□□□ -1.33
VPS4YPR173C HMLALPHA2P0CY09 210 aa6.75□□□□□ -1.33
VPS4YPR173C STE11P23561 717 aa6.75□□□□□ -1.33
VPS4YPR173C YKT6P36015 200 aaKnown RBP6.75□□□□□ -1.33
VPS4YPR173C RFC5P38251 354 aa6.75□□□□□ -1.33
VPS4YPR173C RGA1P39083 1007 aa6.75□□□□□ -1.33
VPS4YPR173C VID28P40547 921 aa6.75□□□□□ -1.33
VPS4YPR173C WAR1Q03631 944 aa6.75□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 55.9 ms