RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO1YPL232W YPP1P46951 817 aa6.37□□□□□ -1.39
SSO1YPL232W FOL2P51601 243 aaKnown RBP6.37□□□□□ -1.39
SSO1YPL232W SPP1Q03012 353 aa6.37□□□□□ -1.39
SSO1YPL232W PRE8P23639 250 aa6.36□□□□□ -1.39
SSO1YPL232W TOM71P38825 639 aaKnown RBP6.36□□□□□ -1.39
SSO1YPL232W STM1P39015 273 aaKnown RBP6.36□□□□□ -1.39
SSO1YPL232W JHD1P40034 492 aa6.36□□□□□ -1.39
SSO1YPL232W SKP2P42843 763 aa6.36□□□□□ -1.39
SSO1YPL232W RSC8P43609 557 aaKnown RBP6.36□□□□□ -1.39
SSO1YPL232W YGR125WP53273 1036 aa6.36□□□□□ -1.39
SSO1YPL232W BUL2Q03758 920 aaKnown RBP6.36□□□□□ -1.39
SSO1YPL232W RPN7Q06103 429 aaKnown RBP6.36□□□□□ -1.39
SSO1YPL232W YDL144CQ07589 356 aa6.36□□□□□ -1.39
SSO1YPL232W WSC3Q12215 556 aa6.36□□□□□ -1.39
SSO1YPL232W CDC19P00549 500 aaKnown RBP6.35□□□□□ -1.39
SSO1YPL232W SRP40P32583 406 aaPredicted RBP6.35□□□□□ -1.39
SSO1YPL232W YKR018CP36114 725 aa6.35□□□□□ -1.39
SSO1YPL232W GRX7P38068 203 aa6.35□□□□□ -1.39
SSO1YPL232W MCM6P53091 1017 aaKnown RBP6.35□□□□□ -1.39
SSO1YPL232W FKS1P38631 1876 aaKnown RBP6.34□□□□□ -1.39
SSO1YPL232W PDC1P06169 563 aaKnown RBP6.34□□□□□ -1.39
SSO1YPL232W UTR4P32626 227 aa6.34□□□□□ -1.39
SSO1YPL232W ALD6P54115 500 aaKnown RBP6.34□□□□□ -1.39
SSO1YPL232W CSI1Q04368 295 aa6.34□□□□□ -1.39
SSO1YPL232W LAM4P38800 1345 aa6.33□□□□□ -1.4
SSO1YPL232W RPS19AP07280 144 aaKnown RBP6.33□□□□□ -1.4
SSO1YPL232W RPS19BP07281 144 aaPredicted RBP6.33□□□□□ -1.4
SSO1YPL232W SRM1P21827 482 aa6.33□□□□□ -1.4
SSO1YPL232W YUR1P26725 428 aa6.33□□□□□ -1.4
SSO1YPL232W POT1P27796 417 aaKnown RBP RIP-Chip data6.33□□□□□ -1.4not detected
SSO1YPL232W MAP1Q01662 387 aaKnown RBP RIP-Chip data6.33□□□□□ -1.4not detected
SSO1YPL232W SKG3Q06315 1026 aa6.33□□□□□ -1.4
SSO1YPL232W RPP0P05317 312 aaKnown RBP6.32□□□□□ -1.4
SSO1YPL232W POX1P13711 748 aa6.32□□□□□ -1.4
SSO1YPL232W VPS29P38759 282 aa6.32□□□□□ -1.4
SSO1YPL232W SSF1P38789 453 aaPredicted RBP6.32□□□□□ -1.4
SSO1YPL232W SCS3P53012 380 aa6.32□□□□□ -1.4
SSO1YPL232W DAK1P54838 584 aaKnown RBP6.32□□□□□ -1.4
SSO1YPL232W RMD1Q03441 430 aa6.32□□□□□ -1.4
SSO1YPL232W RIF1P29539 1916 aa6.32□□□□□ -1.4
SSO1YPL232W TIM23P32897 222 aa6.31□□□□□ -1.4
SSO1YPL232W GEF1P37020 779 aa6.31□□□□□ -1.4
SSO1YPL232W VID30P53076 958 aa6.31□□□□□ -1.4
SSO1YPL232W SOL4P53315 255 aa6.31□□□□□ -1.4
SSO1YPL232W MSC6Q08818 692 aaKnown RBP6.31□□□□□ -1.4
SSO1YPL232W YPL260WQ08977 551 aa6.31□□□□□ -1.4
SSO1YPL232W RTP1Q12751 981 aa6.31□□□□□ -1.4
SSO1YPL232W RAD18P10862 487 aa6.3□□□□□ -1.4
SSO1YPL232W GPT2P36148 743 aa6.3□□□□□ -1.4
SSO1YPL232W POA1P38218 177 aa6.3□□□□□ -1.4
SSO1YPL232W BRL1P38770 471 aa6.3□□□□□ -1.4
SSO1YPL232W VPS53P47061 822 aa6.3□□□□□ -1.4
SSO1YPL232W PHR1P05066 565 aaKnown RBP RIP-Chip data6.29□□□□□ -1.4not detected
SSO1YPL232W SAM1P10659 382 aaKnown RBP6.29□□□□□ -1.4
SSO1YPL232W CAD1P24813 409 aaKnown RBP6.29□□□□□ -1.4
SSO1YPL232W PHO88P38264 188 aaPredicted RBP6.29□□□□□ -1.4
SSO1YPL232W TIF11P38912 153 aaKnown RBP6.29□□□□□ -1.4
SSO1YPL232W YGL039WP53183 348 aaKnown RBP6.29□□□□□ -1.4
SSO1YPL232W SLD5Q03406 294 aa6.29□□□□□ -1.4
SSO1YPL232W TGL1P34163 548 aa6.28□□□□□ -1.4
SSO1YPL232W RDH54P38086 958 aa6.28□□□□□ -1.4
SSO1YPL232W YNL115CP53925 644 aa6.28□□□□□ -1.4
SSO1YPL232W VPS72Q03388 795 aa6.28□□□□□ -1.4
SSO1YPL232W ISA1Q07821 250 aaPredicted RBP6.28□□□□□ -1.4
SSO1YPL232W DAL5P15365 543 aa6.27□□□□□ -1.41
SSO1YPL232W CHS3P29465 1165 aa6.27□□□□□ -1.41
SSO1YPL232W MCM4P30665 933 aaKnown RBP6.27□□□□□ -1.41
SSO1YPL232W SHP1P34223 423 aa6.27□□□□□ -1.41
SSO1YPL232W DBP7P36120 742 aaKnown RBP6.27□□□□□ -1.41
SSO1YPL232W OYE3P41816 400 aaPredicted RBP6.27□□□□□ -1.41
SSO1YPL232W SGM1P47166 707 aa6.27□□□□□ -1.41
SSO1YPL232W YMR321CQ04898 105 aa6.27□□□□□ -1.41
SSO1YPL232W CSC1Q06538 782 aa6.27□□□□□ -1.41
SSO1YPL232W ERP3Q12403 225 aa6.27□□□□□ -1.41
SSO1YPL232W TRM11Q12463 433 aa6.27□□□□□ -1.41
SSO1YPL232W YDR461C-AQ2V2P7 80 aa6.27□□□□□ -1.41
SSO1YPL232W SUI2P20459 304 aaKnown RBP6.26□□□□□ -1.41
SSO1YPL232W MRM1P25270 412 aa6.26□□□□□ -1.41
SSO1YPL232W TFC4P33339 1025 aa6.26□□□□□ -1.41
SSO1YPL232W IOC3P43596 787 aa6.26□□□□□ -1.41
SSO1YPL232W HGH1P48362 394 aaKnown RBP6.26□□□□□ -1.41
SSO1YPL232W TMA64Q04600 565 aaKnown RBP6.26□□□□□ -1.41
SSO1YPL232W DUS3Q06053 668 aaKnown RBP6.26□□□□□ -1.41
SSO1YPL232W SPH1Q06160 661 aa6.26□□□□□ -1.41
SSO1YPL232W MAK21Q12176 1025 aaKnown RBP6.26□□□□□ -1.41
SSO1YPL232W SNA3P14359 133 aa6.25□□□□□ -1.41
SSO1YPL232W SAM2P19358 384 aaKnown RBP6.25□□□□□ -1.41
SSO1YPL232W GCD7P32502 381 aaPredicted RBP6.25□□□□□ -1.41
SSO1YPL232W KTR3P38130 404 aaPredicted RBP6.25□□□□□ -1.41
SSO1YPL232W YHL050CP38721 697 aa6.25□□□□□ -1.41
SSO1YPL232W AZR1P50080 613 aa6.25□□□□□ -1.41
SSO1YPL232W YNL034WP53963 612 aa6.25□□□□□ -1.41
SSO1YPL232W YNL018CP53976 612 aa6.25□□□□□ -1.41
SSO1YPL232W TEL1P38110 2787 aa6.24□□□□□ -1.41
SSO1YPL232W IDI1P15496 288 aa6.24□□□□□ -1.41
SSO1YPL232W TKL1P23254 680 aaKnown RBP6.24□□□□□ -1.41
SSO1YPL232W DUR3P33413 735 aa6.24□□□□□ -1.41
SSO1YPL232W MCR1P36060 302 aaKnown RBP6.24□□□□□ -1.41
SSO1YPL232W FLR1P38124 548 aa6.24□□□□□ -1.41
SSO1YPL232W GUA1P38625 525 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms