RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W TIM50Q02776 476 aa2.46□□□□□ -2.01
SEC16YPL085W NEW1Q08972 1196 aaKnown RBP2.46□□□□□ -2.01
SEC16YPL085W YLR278CQ05854 1341 aa2.46□□□□□ -2.02
SEC16YPL085W TCP1P12612 559 aaKnown RBP2.46□□□□□ -2.02
SEC16YPL085W HOS2P53096 452 aaPredicted RBP2.46□□□□□ -2.02
SEC16YPL085W YGR250CP53316 781 aaKnown RBP2.46□□□□□ -2.02
SEC16YPL085W YPL260WQ08977 551 aa2.46□□□□□ -2.02
SEC16YPL085W TY2B-LR1P0C2J3 1770 aa2.46□□□□□ -2.02
SEC16YPL085W TY2B-FP0CX63 1770 aa2.46□□□□□ -2.02
SEC16YPL085W TY2B-GR2P0CX64 1770 aa2.46□□□□□ -2.02
SEC16YPL085W TY2B-CP25384 1770 aa2.46□□□□□ -2.02
SEC16YPL085W TY2B-DR2Q03494 1770 aa2.46□□□□□ -2.02
SEC16YPL085W TY1B-DR1Q03855 1755 aa2.46□□□□□ -2.02
SEC16YPL085W TY2B-DR3Q07791 1770 aaKnown RBP2.46□□□□□ -2.02
SEC16YPL085W TY2B-OR1Q12113 1770 aa2.46□□□□□ -2.02
SEC16YPL085W TY2B-DR1Q12472 1770 aa2.46□□□□□ -2.02
SEC16YPL085W TY2B-OR2Q12501 1770 aa2.46□□□□□ -2.02
SEC16YPL085W PCK1P10963 549 aa2.46□□□□□ -2.02
SEC16YPL085W RSR1P13856 272 aa2.46□□□□□ -2.02
SEC16YPL085W THR4P16120 514 aaKnown RBP2.46□□□□□ -2.02
SEC16YPL085W MRC1P25588 1096 aa2.46□□□□□ -2.02
SEC16YPL085W KIP2P28743 706 aa2.46□□□□□ -2.02
SEC16YPL085W STM1P39015 273 aaKnown RBP2.46□□□□□ -2.02
SEC16YPL085W FIG4P42837 879 aa2.46□□□□□ -2.02
SEC16YPL085W APL6P46682 809 aa2.46□□□□□ -2.02
SEC16YPL085W ARO80Q04052 950 aa2.46□□□□□ -2.02
SEC16YPL085W ENT2Q05785 613 aa2.46□□□□□ -2.02
SEC16YPL085W BRR1Q99177 341 aaPredicted RBP2.46□□□□□ -2.02
SEC16YPL085W VPH1P32563 840 aaKnown RBP2.46□□□□□ -2.02
SEC16YPL085W YMC2P38087 329 aa2.46□□□□□ -2.02
SEC16YPL085W GGA2P38817 585 aaKnown RBP2.46□□□□□ -2.02
SEC16YPL085W PMC1P38929 1173 aaPredicted RBP2.46□□□□□ -2.02
SEC16YPL085W GPD2P41911 440 aaKnown RBP2.46□□□□□ -2.02
SEC16YPL085W IRC8P47046 822 aa2.46□□□□□ -2.02
SEC16YPL085W YGR237CP50089 785 aa2.46□□□□□ -2.02
SEC16YPL085W PIP2P52960 996 aa2.46□□□□□ -2.02
SEC16YPL085W SKY1Q03656 742 aa2.46□□□□□ -2.02
SEC16YPL085W TRP2P00899 507 aaKnown RBP2.46□□□□□ -2.02
SEC16YPL085W TOP1P04786 769 aa2.46□□□□□ -2.02
SEC16YPL085W MATALPHA2P0CY08 210 aa2.46□□□□□ -2.02
SEC16YPL085W HMLALPHA2P0CY09 210 aa2.46□□□□□ -2.02
SEC16YPL085W MRPL25P23369 157 aa2.46□□□□□ -2.02
SEC16YPL085W CDC10P25342 322 aaKnown RBP2.46□□□□□ -2.02
SEC16YPL085W BLI1P35727 113 aa2.46□□□□□ -2.02
SEC16YPL085W RCR1P38212 213 aa2.46□□□□□ -2.02
SEC16YPL085W PEX18P38855 283 aa2.46□□□□□ -2.02
SEC16YPL085W BUD16P39988 312 aa2.46□□□□□ -2.02
SEC16YPL085W CSM3Q04659 317 aa2.46□□□□□ -2.02
SEC16YPL085W FUS2Q05670 677 aa2.46□□□□□ -2.02
SEC16YPL085W DEP1P31385 405 aa2.45□□□□□ -2.02
SEC16YPL085W POL32P47110 350 aa2.45□□□□□ -2.02
SEC16YPL085W JJJ3P47138 172 aa2.45□□□□□ -2.02
SEC16YPL085W ENV9Q08651 330 aa2.45□□□□□ -2.02
SEC16YPL085W DNF3Q12674 1656 aa2.45□□□□□ -2.02
SEC16YPL085W SES1P07284 462 aaKnown RBP2.45□□□□□ -2.02
SEC16YPL085W LPD1P09624 499 aaKnown RBP2.45□□□□□ -2.02
SEC16YPL085W APL1P27351 700 aa2.45□□□□□ -2.02
SEC16YPL085W SRB4P32569 687 aa2.45□□□□□ -2.02
SEC16YPL085W SKG6P32900 734 aaPredicted RBP2.45□□□□□ -2.02
SEC16YPL085W TEL2P53038 688 aa2.45□□□□□ -2.02
SEC16YPL085W YEH1Q07804 573 aa2.45□□□□□ -2.02
SEC16YPL085W GYP5Q12344 894 aa2.45□□□□□ -2.02
SEC16YPL085W RVB2Q12464 471 aaKnown RBP2.45□□□□□ -2.02
SEC16YPL085W ENT1Q12518 454 aa2.45□□□□□ -2.02
SEC16YPL085W MDM35O60200 86 aa2.45□□□□□ -2.02
SEC16YPL085W KGD2P19262 463 aaPredicted RBP2.45□□□□□ -2.02
SEC16YPL085W MSP1P28737 362 aa2.45□□□□□ -2.02
SEC16YPL085W SEC66P33754 206 aa2.45□□□□□ -2.02
SEC16YPL085W CEP3P40969 608 aa2.45□□□□□ -2.02
SEC16YPL085W HLJ1P48353 224 aa2.45□□□□□ -2.02
SEC16YPL085W GFD1Q04839 188 aaKnown RBP2.45□□□□□ -2.02
SEC16YPL085W RAD61Q99359 647 aa2.45□□□□□ -2.02
SEC16YPL085W SUI2P20459 304 aaKnown RBP2.45□□□□□ -2.02
SEC16YPL085W STE11P23561 717 aa2.45□□□□□ -2.02
SEC16YPL085W WHI3P34761 661 aaKnown RBP2.45□□□□□ -2.02
SEC16YPL085W CAJ1P39101 391 aa2.45□□□□□ -2.02
SEC16YPL085W EAR1Q03212 550 aa2.45□□□□□ -2.02
SEC16YPL085W PHM6Q05637 104 aa2.45□□□□□ -2.02
SEC16YPL085W YBT1P32386 1661 aa2.45□□□□□ -2.02
SEC16YPL085W POL3P15436 1097 aa2.45□□□□□ -2.02
SEC16YPL085W PRP16P15938 1071 aaPredicted RBP2.45□□□□□ -2.02
SEC16YPL085W YKL091CP33324 310 aaKnown RBP2.45□□□□□ -2.02
SEC16YPL085W TFC4P33339 1025 aa2.45□□□□□ -2.02
SEC16YPL085W HXT8P40886 569 aa2.45□□□□□ -2.02
SEC16YPL085W LYS14P40971 790 aa2.45□□□□□ -2.02
SEC16YPL085W BUD6P41697 788 aa2.45□□□□□ -2.02
SEC16YPL085W TEA1P47988 759 aa2.45□□□□□ -2.02
SEC16YPL085W YPT11P48559 417 aa2.45□□□□□ -2.02
SEC16YPL085W MSN5P52918 1224 aa2.45□□□□□ -2.02
SEC16YPL085W ZPR1P53303 486 aaKnown RBP2.45□□□□□ -2.02
SEC16YPL085W ALF1P53904 254 aa2.45□□□□□ -2.02
SEC16YPL085W YMR102CQ03177 834 aa2.45□□□□□ -2.02
SEC16YPL085W BUL2Q03758 920 aaKnown RBP2.45□□□□□ -2.02
SEC16YPL085W TY2B-BQ12491 1770 aa2.45□□□□□ -2.02
SEC16YPL085W SMY2P32909 740 aaKnown RBP2.45□□□□□ -2.02
SEC16YPL085W ARL1P38116 183 aaKnown RBP2.45□□□□□ -2.02
SEC16YPL085W RCF2P53721 224 aa2.45□□□□□ -2.02
SEC16YPL085W THI22Q06490 572 aa2.45□□□□□ -2.02
SEC16YPL085W AIM7Q12156 149 aa2.45□□□□□ -2.02
SEC16YPL085W SSH4P32343 579 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms