RNA–Protein interactions for RNA: YPL018W

CTF19, Transcript of Outer kinetochore protein, needed for accurate chromosome segregation, yeastyeast

Gene CTF19, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF19YPL018W GAL2P13181 574 aa7.47□□□□□ -1.21
CTF19YPL018W SSA4P22202 642 aaKnown RBP7.47□□□□□ -1.21
CTF19YPL018W PRE8P23639 250 aa7.47□□□□□ -1.21
CTF19YPL018W UBP14P38237 781 aaKnown RBP7.47□□□□□ -1.21
CTF19YPL018W TPS3P38426 1054 aaKnown RBP7.47□□□□□ -1.21
CTF19YPL018W KEL1P38853 1164 aaKnown RBP7.47□□□□□ -1.21
CTF19YPL018W VNX1P42839 908 aa7.47□□□□□ -1.21
CTF19YPL018W EST2Q06163 884 aa7.47□□□□□ -1.21
CTF19YPL018W DUR1,2P32528 1835 aaKnown RBP7.47□□□□□ -1.21
CTF19YPL018W MPH3P0CE00 602 aa7.46□□□□□ -1.22
CTF19YPL018W SRS2P12954 1174 aa7.46□□□□□ -1.22
CTF19YPL018W SRM1P21827 482 aa7.46□□□□□ -1.22
CTF19YPL018W RIT1P23796 513 aa7.46□□□□□ -1.22
CTF19YPL018W CST26P38226 397 aa7.46□□□□□ -1.22
CTF19YPL018W SNU71P53207 620 aaKnown RBP7.46□□□□□ -1.22
CTF19YPL018W HDA1P53973 706 aa7.46□□□□□ -1.22
CTF19YPL018W YLR326WQ06170 240 aaKnown RBP7.46□□□□□ -1.22
CTF19YPL018W KIN1P13185 1064 aa7.45□□□□□ -1.22
CTF19YPL018W ACE2P21192 770 aa7.45□□□□□ -1.22
CTF19YPL018W MYO3P36006 1272 aa7.45□□□□□ -1.22
CTF19YPL018W YKE2P52553 114 aa7.45□□□□□ -1.22
CTF19YPL018W YDR090CQ03193 310 aa7.45□□□□□ -1.22
CTF19YPL018W CSR2Q12734 1121 aa7.45□□□□□ -1.22
CTF19YPL018W FLO1P32768 1537 aa7.44□□□□□ -1.22
CTF19YPL018W PCT1P13259 424 aa7.44□□□□□ -1.22
CTF19YPL018W PRO3P32263 286 aaKnown RBP7.44□□□□□ -1.22
CTF19YPL018W FBP26P32604 452 aa7.44□□□□□ -1.22
CTF19YPL018W PNT1P38969 423 aa7.44□□□□□ -1.22
CTF19YPL018W ALG2P43636 503 aa7.44□□□□□ -1.22
CTF19YPL018W PTK2P47116 818 aaKnown RBP7.44□□□□□ -1.22
CTF19YPL018W ENT3P47160 408 aa7.44□□□□□ -1.22
CTF19YPL018W TFC6Q06339 672 aa7.44□□□□□ -1.22
CTF19YPL018W LAP2Q10740 671 aa7.44□□□□□ -1.22
CTF19YPL018W TUB2P02557 457 aaKnown RBP7.43□□□□□ -1.22
CTF19YPL018W HTA1P04911 132 aaKnown RBP7.43□□□□□ -1.22
CTF19YPL018W HTA2P04912 132 aa7.43□□□□□ -1.22
CTF19YPL018W RPL19AP0CX82 189 aaKnown RBP7.43□□□□□ -1.22
CTF19YPL018W RPL19BP0CX83 189 aaPredicted RBP7.43□□□□□ -1.22
CTF19YPL018W PFK2P16862 959 aaKnown RBP RIP-Chip data7.43□□□□□ -1.22not detected
CTF19YPL018W MAK31P23059 88 aa7.43□□□□□ -1.22
CTF19YPL018W RPL8BP29453 256 aaKnown RBP7.43□□□□□ -1.22
CTF19YPL018W ACA1P39970 489 aa7.43□□□□□ -1.22
CTF19YPL018W YIL089WP40500 205 aa7.43□□□□□ -1.22
CTF19YPL018W RPT6Q01939 405 aaKnown RBP7.43□□□□□ -1.22
CTF19YPL018W VPS20Q04272 221 aa7.43□□□□□ -1.22
CTF19YPL018W COX6P00427 148 aa7.42□□□□□ -1.22
CTF19YPL018W HCA4P20448 770 aaKnown RBP7.42□□□□□ -1.22
CTF19YPL018W CHS3P29465 1165 aa7.42□□□□□ -1.22
CTF19YPL018W OPY1P38271 328 aa7.42□□□□□ -1.22
CTF19YPL018W AKR1P39010 764 aa7.42□□□□□ -1.22
CTF19YPL018W CSM2P40465 213 aa7.42□□□□□ -1.22
CTF19YPL018W EPL1P43572 832 aa7.42□□□□□ -1.22
CTF19YPL018W CTF18P49956 741 aa7.42□□□□□ -1.22
CTF19YPL018W RRT6P53117 311 aaPredicted RBP7.42□□□□□ -1.22
CTF19YPL018W FOL1P53848 824 aa7.42□□□□□ -1.22
CTF19YPL018W PEX29Q03370 554 aa7.42□□□□□ -1.22
CTF19YPL018W GIN4Q12263 1142 aa7.42□□□□□ -1.22
CTF19YPL018W MATALPHA2P0CY08 210 aa7.41□□□□□ -1.22
CTF19YPL018W HMLALPHA2P0CY09 210 aa7.41□□□□□ -1.22
CTF19YPL018W MAL31P38156 614 aa7.41□□□□□ -1.22
CTF19YPL018W BUD6P41697 788 aa7.41□□□□□ -1.22
CTF19YPL018W YGL081WP53156 320 aa7.41□□□□□ -1.22
CTF19YPL018W ECM23Q02710 187 aa7.41□□□□□ -1.22
CTF19YPL018W VPS30Q02948 557 aa7.41□□□□□ -1.22
CTF19YPL018W MYO5Q04439 1219 aaKnown RBP7.41□□□□□ -1.22
CTF19YPL018W SKG3Q06315 1026 aa7.41□□□□□ -1.22
CTF19YPL018W PSK2Q08217 1101 aa7.41□□□□□ -1.22
CTF19YPL018W MAM3Q12296 706 aa7.41□□□□□ -1.22
CTF19YPL018W ERG12P07277 443 aa7.4□□□□□ -1.22
CTF19YPL018W KEX1P09620 729 aa7.4□□□□□ -1.22
CTF19YPL018W KRS1P15180 591 aaKnown RBP7.4□□□□□ -1.22
CTF19YPL018W SAM2P19358 384 aaKnown RBP7.4□□□□□ -1.22
CTF19YPL018W EAP1P36041 632 aaKnown RBP7.4□□□□□ -1.22
CTF19YPL018W YHL017WP38745 532 aa7.4□□□□□ -1.22
CTF19YPL018W TIF11P38912 153 aaKnown RBP7.4□□□□□ -1.22
CTF19YPL018W VPS45P38932 577 aa7.4□□□□□ -1.22
CTF19YPL018W PES4P39684 611 aa7.4□□□□□ -1.22
CTF19YPL018W NPA3P47122 385 aa7.4□□□□□ -1.22
CTF19YPL018W CLF1Q12309 687 aaPredicted RBP7.4□□□□□ -1.22
CTF19YPL018W YOR111WQ99210 232 aa7.4□□□□□ -1.22
CTF19YPL018W NUC1P08466 329 aa7.39□□□□□ -1.23
CTF19YPL018W BIK1P11709 440 aa7.39□□□□□ -1.23
CTF19YPL018W TTI1P36097 1038 aa7.39□□□□□ -1.23
CTF19YPL018W NUP42P49686 430 aaKnown RBP7.39□□□□□ -1.23
CTF19YPL018W RNR3P21672 869 aaKnown RBP7.38□□□□□ -1.23
CTF19YPL018W BMH2P34730 273 aaKnown RBP7.38□□□□□ -1.23
CTF19YPL018W OCT1P35999 772 aa7.38□□□□□ -1.23
CTF19YPL018W VPS24P36095 224 aaKnown RBP7.38□□□□□ -1.23
CTF19YPL018W TIF4631P39935 952 aaKnown RBP7.38□□□□□ -1.23
CTF19YPL018W LYS14P40971 790 aa7.38□□□□□ -1.23
CTF19YPL018W PEX14P53112 341 aa7.38□□□□□ -1.23
CTF19YPL018W YDR341CQ05506 607 aaKnown RBP7.38□□□□□ -1.23
CTF19YPL018W SUB2Q07478 446 aaKnown RBP7.38□□□□□ -1.23
CTF19YPL018W TYW1Q08960 810 aaKnown RBP7.38□□□□□ -1.23
CTF19YPL018W ELG1Q12050 791 aa7.38□□□□□ -1.23
CTF19YPL018W CIT1P00890 479 aa7.37□□□□□ -1.23
CTF19YPL018W HSP82P02829 709 aaKnown RBP7.37□□□□□ -1.23
CTF19YPL018W AI4P03878 556 aa7.37□□□□□ -1.23
CTF19YPL018W PCS60P38137 543 aaKnown RBP RIP-Chip data7.37□□□□□ -1.23not detected
CTF19YPL018W RPN10P38886 268 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms