RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN8YOR261C DAL4Q04895 635 aa6.94□□□□□ -1.3
RPN8YOR261C HTS1P07263 546 aaKnown RBP6.93□□□□□ -1.3
RPN8YOR261C MCM5P29496 775 aaKnown RBP6.93□□□□□ -1.3
RPN8YOR261C MGE1P38523 228 aa6.93□□□□□ -1.3
RPN8YOR261C ASF1P32447 279 aa6.92□□□□□ -1.3
RPN8YOR261C DSE4P53753 1117 aa6.92□□□□□ -1.3
RPN8YOR261C HXK1P04806 485 aaKnown RBP6.91□□□□□ -1.3
RPN8YOR261C UGA4P32837 571 aa6.91□□□□□ -1.3
RPN8YOR261C KAR2P16474 682 aaKnown RBP6.9□□□□□ -1.3
RPN8YOR261C SFA1P32771 386 aa6.9□□□□□ -1.3
RPN8YOR261C SEC8P32855 1065 aa6.9□□□□□ -1.3
RPN8YOR261C FAA3P39002 694 aa6.9□□□□□ -1.3
RPN8YOR261C CTH1P47976 325 aa6.9□□□□□ -1.3
RPN8YOR261C ULP1Q02724 621 aa6.9□□□□□ -1.3
RPN8YOR261C YLR122CQ12312 125 aa6.9□□□□□ -1.3
RPN8YOR261C YGR122WP53272 402 aa6.89□□□□□ -1.31
RPN8YOR261C NOG1Q02892 647 aaKnown RBP6.89□□□□□ -1.31
RPN8YOR261C MED7Q08278 222 aa6.89□□□□□ -1.31
RPN8YOR261C YIG1Q08956 461 aa6.89□□□□□ -1.31
RPN8YOR261C ELG1Q12050 791 aa6.89□□□□□ -1.31
RPN8YOR261C TY1A-NL1Q12391 440 aaKnown RBP6.89□□□□□ -1.31
RPN8YOR261C MCM2P29469 868 aa6.88□□□□□ -1.31
RPN8YOR261C MAE1P36013 669 aaKnown RBP6.88□□□□□ -1.31
RPN8YOR261C YPL109CQ02981 657 aa6.88□□□□□ -1.31
RPN8YOR261C ERS1P17261 260 aa6.87□□□□□ -1.31
RPN8YOR261C KAE1P36132 386 aa6.87□□□□□ -1.31
RPN8YOR261C UTP22P53254 1237 aaPredicted RBP6.87□□□□□ -1.31
RPN8YOR261C ADI1Q03677 179 aa6.87□□□□□ -1.31
RPN8YOR261C COQ2P32378 372 aa6.86□□□□□ -1.31
RPN8YOR261C EXO5P38289 585 aa6.86□□□□□ -1.31
RPN8YOR261C RPS26AP39938 119 aaKnown RBP6.86□□□□□ -1.31
RPN8YOR261C RPS26BP39939 119 aaKnown RBP6.86□□□□□ -1.31
RPN8YOR261C FYV10P40492 516 aa6.86□□□□□ -1.31
RPN8YOR261C CYC8P14922 966 aa6.85□□□□□ -1.31
RPN8YOR261C LIP5P32875 414 aa6.85□□□□□ -1.31
RPN8YOR261C GCV1P48015 400 aa6.85□□□□□ -1.31
RPN8YOR261C FAR11P53917 953 aa6.85□□□□□ -1.31
RPN8YOR261C MEC3Q02574 474 aa6.85□□□□□ -1.31
RPN8YOR261C RAD2P07276 1031 aa6.84□□□□□ -1.31
RPN8YOR261C TY1A-LR4P0C2I8 440 aaKnown RBP6.84□□□□□ -1.31
RPN8YOR261C TY1A-DR6P0CX70 440 aa6.84□□□□□ -1.31
RPN8YOR261C TY1A-ER1P0CX71 440 aa6.84□□□□□ -1.31
RPN8YOR261C TY1A-LR2P0CX72 440 aa6.84□□□□□ -1.31
RPN8YOR261C TY1A-PLP0CX73 440 aa6.84□□□□□ -1.31
RPN8YOR261C TY1A-JR1P0CX74 440 aa6.84□□□□□ -1.31
RPN8YOR261C TY1A-LR3P0CX75 440 aa6.84□□□□□ -1.31
RPN8YOR261C TY1A-ML2P0CX76 440 aa6.84□□□□□ -1.31
RPN8YOR261C YKL077WP36081 392 aa6.84□□□□□ -1.31
RPN8YOR261C TOS1P38288 455 aa6.84□□□□□ -1.31
RPN8YOR261C SHU2P38957 223 aa6.84□□□□□ -1.31
RPN8YOR261C PIC2P40035 300 aa6.84□□□□□ -1.31
RPN8YOR261C NCE103P53615 221 aa6.84□□□□□ -1.31
RPN8YOR261C OYE2Q03558 400 aaKnown RBP6.84□□□□□ -1.31
RPN8YOR261C SPR28Q04921 423 aa6.84□□□□□ -1.31
RPN8YOR261C TY1A-GR1Q12085 440 aa6.84□□□□□ -1.31
RPN8YOR261C TY1A-PR3Q6Q5H1 440 aaKnown RBP6.84□□□□□ -1.31
RPN8YOR261C TY1A-OLQ92392 440 aaKnown RBP6.84□□□□□ -1.31
RPN8YOR261C MSH3P25336 1018 aa6.83□□□□□ -1.32
RPN8YOR261C MRPS18P42847 217 aa6.83□□□□□ -1.32
RPN8YOR261C KIP3P53086 805 aaKnown RBP6.83□□□□□ -1.32
RPN8YOR261C AOS1Q06624 347 aa6.83□□□□□ -1.32
RPN8YOR261C PRE9P23638 258 aaKnown RBP6.82□□□□□ -1.32
RPN8YOR261C RSC6P25632 483 aa6.82□□□□□ -1.32
RPN8YOR261C PUB1P32588 453 aaKnown RBP RIP-Chip data6.82□□□□□ -1.32not detected
RPN8YOR261C ARL1P38116 183 aaKnown RBP6.82□□□□□ -1.32
RPN8YOR261C PEX28P38848 579 aa6.82□□□□□ -1.32
RPN8YOR261C PEX13P80667 386 aa6.82□□□□□ -1.32
RPN8YOR261C MCD1Q12158 566 aa6.82□□□□□ -1.32
RPN8YOR261C SLS1P42900 643 aa6.81□□□□□ -1.32
RPN8YOR261C RSM26P47141 266 aa6.81□□□□□ -1.32
RPN8YOR261C YGL140CP53120 1219 aa6.81□□□□□ -1.32
RPN8YOR261C YMR074CQ04773 145 aa6.81□□□□□ -1.32
RPN8YOR261C REC8Q12188 680 aa6.81□□□□□ -1.32
RPN8YOR261C YLL054CQ12244 843 aa6.81□□□□□ -1.32
RPN8YOR261C HEM13P11353 328 aaKnown RBP6.8□□□□□ -1.32
RPN8YOR261C SQT1P35184 431 aa6.8□□□□□ -1.32
RPN8YOR261C REI1P38344 393 aaPredicted RBP6.8□□□□□ -1.32
RPN8YOR261C NEM1P38757 446 aa6.8□□□□□ -1.32
RPN8YOR261C ELM1P32801 640 aa6.79□□□□□ -1.32
RPN8YOR261C RDH54P38086 958 aa6.79□□□□□ -1.32
RPN8YOR261C YGR130CP53278 816 aa6.79□□□□□ -1.32
RPN8YOR261C BRE4Q07660 1125 aa6.79□□□□□ -1.32
RPN8YOR261C YOR223WQ12015 292 aa6.79□□□□□ -1.32
RPN8YOR261C RMD1Q03441 430 aa6.78□□□□□ -1.32
RPN8YOR261C ALG6Q12001 544 aaKnown RBP6.78□□□□□ -1.32
RPN8YOR261C SEC23P15303 768 aaKnown RBP6.77□□□□□ -1.33
RPN8YOR261C VMA4P22203 233 aaKnown RBP6.77□□□□□ -1.33
RPN8YOR261C SAF1P38352 637 aa6.77□□□□□ -1.33
RPN8YOR261C UTP5Q04177 643 aaKnown RBP6.77□□□□□ -1.33
RPN8YOR261C NAM7P30771 971 aaKnown RBP6.76□□□□□ -1.33
RPN8YOR261C PEP7P32609 515 aa6.76□□□□□ -1.33
RPN8YOR261C YGR045CP53229 120 aa6.76□□□□□ -1.33
RPN8YOR261C DOT1Q04089 582 aaKnown RBP6.76□□□□□ -1.33
RPN8YOR261C ESF1Q06344 628 aaKnown RBP6.76□□□□□ -1.33
RPN8YOR261C MAG2Q06436 670 aaKnown RBP6.76□□□□□ -1.33
RPN8YOR261C MTR4P47047 1073 aaKnown RBP6.75□□□□□ -1.33
RPN8YOR261C CHS2P14180 963 aa6.74□□□□□ -1.33
RPN8YOR261C GPT2P36148 743 aa6.74□□□□□ -1.33
RPN8YOR261C SNU71P53207 620 aaKnown RBP6.74□□□□□ -1.33
RPN8YOR261C AKR1P39010 764 aa6.73□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms