RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C SAP155P43612 1002 aa3.95□□□□□ -1.78
RPB11YOL005C PRY1P47032 299 aa3.95□□□□□ -1.78
RPB11YOL005C UTP22P53254 1237 aaPredicted RBP3.95□□□□□ -1.78
RPB11YOL005C DSE4P53753 1117 aa3.95□□□□□ -1.78
RPB11YOL005C YMR187CQ03236 431 aa3.95□□□□□ -1.78
RPB11YOL005C ELG1Q12050 791 aa3.95□□□□□ -1.78
RPB11YOL005C MCD1Q12158 566 aa3.95□□□□□ -1.78
RPB11YOL005C MSH3P25336 1018 aa3.94□□□□□ -1.78
RPB11YOL005C PET112P33893 541 aa3.94□□□□□ -1.78
RPB11YOL005C PEX28P38848 579 aa3.94□□□□□ -1.78
RPB11YOL005C MET10P39692 1035 aa3.94□□□□□ -1.78
RPB11YOL005C POL5P39985 1022 aaKnown RBP3.94□□□□□ -1.78
RPB11YOL005C YFL066CP43538 392 aa3.94□□□□□ -1.78
RPB11YOL005C FAR11P53917 953 aa3.94□□□□□ -1.78
RPB11YOL005C YPL109CQ02981 657 aa3.94□□□□□ -1.78
RPB11YOL005C ALG6Q12001 544 aaKnown RBP3.94□□□□□ -1.78
RPB11YOL005C DED1P06634 604 aaKnown RBP3.93□□□□□ -1.78
RPB11YOL005C PRP5P21372 849 aaPredicted RBP3.93□□□□□ -1.78
RPB11YOL005C MAD1P40957 749 aa3.93□□□□□ -1.78
RPB11YOL005C XKS1P42826 600 aa3.93□□□□□ -1.78
RPB11YOL005C KIP3P53086 805 aaKnown RBP3.93□□□□□ -1.78
RPB11YOL005C YNR063WP53749 607 aa3.93□□□□□ -1.78
RPB11YOL005C MRL1Q06815 381 aa3.93□□□□□ -1.78
RPB11YOL005C YIG1Q08956 461 aa3.93□□□□□ -1.78
RPB11YOL005C PUS1Q12211 544 aaKnown RBP3.93□□□□□ -1.78
RPB11YOL005C YPR053CQ6Q5F3 151 aa3.93□□□□□ -1.78
RPB11YOL005C TY1A-LR4P0C2I8 440 aaKnown RBP3.92□□□□□ -1.78
RPB11YOL005C TY1A-DR6P0CX70 440 aa3.92□□□□□ -1.78
RPB11YOL005C TY1A-ER1P0CX71 440 aa3.92□□□□□ -1.78
RPB11YOL005C TY1A-LR2P0CX72 440 aa3.92□□□□□ -1.78
RPB11YOL005C TY1A-PLP0CX73 440 aa3.92□□□□□ -1.78
RPB11YOL005C TY1A-JR1P0CX74 440 aa3.92□□□□□ -1.78
RPB11YOL005C TY1A-LR3P0CX75 440 aa3.92□□□□□ -1.78
RPB11YOL005C TY1A-ML2P0CX76 440 aa3.92□□□□□ -1.78
RPB11YOL005C TAT1P38085 619 aa3.92□□□□□ -1.78
RPB11YOL005C EXO5P38289 585 aa3.92□□□□□ -1.78
RPB11YOL005C MCX1P38323 520 aaPredicted RBP3.92□□□□□ -1.78
RPB11YOL005C REI1P38344 393 aaPredicted RBP3.92□□□□□ -1.78
RPB11YOL005C SLN1P39928 1220 aaPredicted RBP3.92□□□□□ -1.78
RPB11YOL005C PIC2P40035 300 aa3.92□□□□□ -1.78
RPB11YOL005C MTR4P47047 1073 aaKnown RBP3.92□□□□□ -1.78
RPB11YOL005C BUD9P53226 547 aa3.92□□□□□ -1.78
RPB11YOL005C CWC24P53769 259 aa3.92□□□□□ -1.78
RPB11YOL005C TY1A-GR1Q12085 440 aa3.92□□□□□ -1.78
RPB11YOL005C YLL054CQ12244 843 aa3.92□□□□□ -1.78
RPB11YOL005C PHM7Q12252 991 aa3.92□□□□□ -1.78
RPB11YOL005C TY1A-PR3Q6Q5H1 440 aaKnown RBP3.92□□□□□ -1.78
RPB11YOL005C TY1A-OLQ92392 440 aaKnown RBP3.92□□□□□ -1.78
RPB11YOL005C ICP55P40051 511 aa3.91□□□□□ -1.78
RPB11YOL005C SLS1P42900 643 aa3.91□□□□□ -1.78
RPB11YOL005C YGL140CP53120 1219 aa3.91□□□□□ -1.78
RPB11YOL005C NOG1Q02892 647 aaKnown RBP3.91□□□□□ -1.78
RPB11YOL005C RMD1Q03441 430 aa3.91□□□□□ -1.78
RPB11YOL005C SVF1Q05515 481 aa3.91□□□□□ -1.78
RPB11YOL005C AVO1Q08236 1176 aa3.91□□□□□ -1.78
RPB11YOL005C NAP1P25293 417 aaKnown RBP3.9□□□□□ -1.79
RPB11YOL005C RSC6P25632 483 aa3.9□□□□□ -1.79
RPB11YOL005C PAM1P37304 830 aaKnown RBP3.9□□□□□ -1.79
RPB11YOL005C SPO74P45819 413 aa3.9□□□□□ -1.79
RPB11YOL005C GCV1P48015 400 aa3.9□□□□□ -1.79
RPB11YOL005C MEC3Q02574 474 aa3.9□□□□□ -1.79
RPB11YOL005C DOT1Q04089 582 aaKnown RBP3.9□□□□□ -1.79
RPB11YOL005C MCA1Q08601 432 aa3.9□□□□□ -1.79
RPB11YOL005C YOR223WQ12015 292 aa3.9□□□□□ -1.79
RPB11YOL005C YDR215CQ12240 137 aa3.9□□□□□ -1.79
RPB11YOL005C TY1A-NL1Q12391 440 aaKnown RBP3.9□□□□□ -1.79
RPB11YOL005C SCP160P06105 1222 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
RPB11YOL005C GCR1P07261 785 aa3.89□□□□□ -1.79
RPB11YOL005C CLN2P20438 545 aa3.89□□□□□ -1.79
RPB11YOL005C YCK2P23292 546 aaKnown RBP3.89□□□□□ -1.79
RPB11YOL005C RAD27P26793 382 aa3.89□□□□□ -1.79
RPB11YOL005C NEM1P38757 446 aa3.89□□□□□ -1.79
RPB11YOL005C AKR1P39010 764 aa3.89□□□□□ -1.79
RPB11YOL005C ELA1P53861 379 aaPredicted RBP3.89□□□□□ -1.79
RPB11YOL005C AI3P03877 415 aa3.88□□□□□ -1.79
RPB11YOL005C SEC23P15303 768 aaKnown RBP3.88□□□□□ -1.79
RPB11YOL005C VMA4P22203 233 aaKnown RBP3.88□□□□□ -1.79
RPB11YOL005C SFA1P32771 386 aa3.88□□□□□ -1.79
RPB11YOL005C GPT2P36148 743 aa3.88□□□□□ -1.79
RPB11YOL005C UTP5Q04177 643 aaKnown RBP3.88□□□□□ -1.79
RPB11YOL005C EST2Q06163 884 aa3.88□□□□□ -1.79
RPB11YOL005C HDA2Q06629 674 aa3.88□□□□□ -1.79
RPB11YOL005C VAC8P39968 578 aa3.87□□□□□ -1.79
RPB11YOL005C ROD1Q02805 837 aa3.87□□□□□ -1.79
RPB11YOL005C GDE1Q02979 1223 aa3.87□□□□□ -1.79
RPB11YOL005C LAP2Q10740 671 aa3.87□□□□□ -1.79
RPB11YOL005C REC8Q12188 680 aa3.87□□□□□ -1.79
RPB11YOL005C HEM13P11353 328 aaKnown RBP3.86□□□□□ -1.79
RPB11YOL005C NAM7P30771 971 aaKnown RBP3.86□□□□□ -1.79
RPB11YOL005C COQ2P32378 372 aa3.86□□□□□ -1.79
RPB11YOL005C MNR2P35724 969 aa3.86□□□□□ -1.79
RPB11YOL005C ADD66P36040 267 aa3.86□□□□□ -1.79
RPB11YOL005C ARL1P38116 183 aaKnown RBP3.86□□□□□ -1.79
RPB11YOL005C HSE1P38753 452 aa3.86□□□□□ -1.79
RPB11YOL005C NMD3P38861 518 aaKnown RBP3.86□□□□□ -1.79
RPB11YOL005C YAR028WP39548 234 aa3.86□□□□□ -1.79
RPB11YOL005C YGR045CP53229 120 aa3.86□□□□□ -1.79
RPB11YOL005C NCE103P53615 221 aa3.86□□□□□ -1.79
RPB11YOL005C ALD6P54115 500 aaKnown RBP3.86□□□□□ -1.79
RPB11YOL005C GIC2Q06648 383 aa3.86□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms