RNA–Protein interactions for RNA: YMR284W

YKU70, Transcript of Subunit of the telomeric Ku complex (Yku70p-Yku80p), yeast

Gene YKU70, Length 1,809 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKU70	YMR284W	PUS9	Q12069	462 aa		3.42	□□□□□ -1.86
YKU70	YMR284W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	3.41	□□□□□ -1.86	RIP-Chip
YKU70	YMR284W	NTA1	P40354	457 aa		3.41	□□□□□ -1.86
YKU70	YMR284W	TRM2	P33753	639 aa		3.4	□□□□□ -1.87
YKU70	YMR284W	YIG1	Q08956	461 aa		3.39	□□□□□ -1.87
YKU70	YMR284W	PYC2	P32327	1180 aa	Known RBP	3.38	□□□□□ -1.87
YKU70	YMR284W	TAT2	P38967	592 aa		3.38	□□□□□ -1.87
YKU70	YMR284W	MEC3	Q02574	474 aa		3.38	□□□□□ -1.87
YKU70	YMR284W	ECM23	Q02710	187 aa		3.38	□□□□□ -1.87
YKU70	YMR284W	SMY2	P32909	740 aa	Known RBP	3.37	□□□□□ -1.87
YKU70	YMR284W	RAD55	P38953	406 aa		3.37	□□□□□ -1.87
YKU70	YMR284W	HGH1	P48362	394 aa	Known RBP	3.37	□□□□□ -1.87
YKU70	YMR284W	MSE1	P48525	536 aa		3.37	□□□□□ -1.87
YKU70	YMR284W	IRS4	P36115	615 aa	Known RBP	3.37	□□□□□ -1.87
YKU70	YMR284W	YOR352W	Q08816	343 aa		3.37	□□□□□ -1.87
YKU70	YMR284W	REI1	P38344	393 aa	Predicted RBP	3.36	□□□□□ -1.87
YKU70	YMR284W	UBX7	P38349	436 aa		3.36	□□□□□ -1.87
YKU70	YMR284W	PUN1	Q06991	263 aa		3.36	□□□□□ -1.87
YKU70	YMR284W	TIF6	Q12522	245 aa	Known RBP	3.36	□□□□□ -1.87
YKU70	YMR284W	NNK1	P36003	928 aa		3.35	□□□□□ -1.87
YKU70	YMR284W	TGL4	P36165	910 aa		3.35	□□□□□ -1.87
YKU70	YMR284W	PSY2	P40164	858 aa		3.35	□□□□□ -1.87
YKU70	YMR284W	SUT1	P53032	299 aa	Known RBP	3.35	□□□□□ -1.87
YKU70	YMR284W	URN1	Q06525	465 aa	Known RBP	3.35	□□□□□ -1.87
YKU70	YMR284W	ALG6	Q12001	544 aa	Known RBP	3.35	□□□□□ -1.87
YKU70	YMR284W	HTS1	P07263	546 aa	Known RBP	3.33	□□□□□ -1.88
YKU70	YMR284W	SMC1	P32908	1225 aa		3.33	□□□□□ -1.88
YKU70	YMR284W	SPT20	P50875	604 aa		3.33	□□□□□ -1.88
YKU70	YMR284W	PUF6	Q04373	656 aa	Known RBP	3.33	□□□□□ -1.88
YKU70	YMR284W	UTP22	P53254	1237 aa	Predicted RBP	3.33	□□□□□ -1.88
YKU70	YMR284W	ELA1	P53861	379 aa	Predicted RBP	3.33	□□□□□ -1.88
YKU70	YMR284W	AVO1	Q08236	1176 aa		3.33	□□□□□ -1.88
YKU70	YMR284W	SNM1	P40993	198 aa		3.32	□□□□□ -1.88
YKU70	YMR284W	SLI1	P53304	468 aa		3.32	□□□□□ -1.88
YKU70	YMR284W	CTF4	Q01454	927 aa		3.32	□□□□□ -1.88
YKU70	YMR284W	PUS7	Q08647	676 aa	Known RBP	3.32	□□□□□ -1.88
YKU70	YMR284W	SRS2	P12954	1174 aa		3.31	□□□□□ -1.88
YKU70	YMR284W	YGR045C	P53229	120 aa		3.31	□□□□□ -1.88
YKU70	YMR284W	YDR132C	Q03900	495 aa		3.31	□□□□□ -1.88
YKU70	YMR284W	RAD53	P22216	821 aa		3.3	□□□□□ -1.88
YKU70	YMR284W	TTI1	P36097	1038 aa		3.3	□□□□□ -1.88
YKU70	YMR284W	TPP1	Q03796	238 aa		3.3	□□□□□ -1.88
YKU70	YMR284W	YHL012W	P38709	493 aa		3.3	□□□□□ -1.88
YKU70	YMR284W	ENV11	P53246	860 aa		3.3	□□□□□ -1.88
YKU70	YMR284W	MDL2	P33311	773 aa		3.29	□□□□□ -1.88
YKU70	YMR284W	NPR1	P22211	790 aa		3.28	□□□□□ -1.88
YKU70	YMR284W	HCM1	P25364	564 aa		3.28	□□□□□ -1.88
YKU70	YMR284W	RRN6	P32786	894 aa		3.28	□□□□□ -1.88
YKU70	YMR284W	ECM2	P38241	364 aa	Known RBP	3.28	□□□□□ -1.88
YKU70	YMR284W	SUN4	P53616	420 aa		3.28	□□□□□ -1.88
YKU70	YMR284W	APC11	Q12157	165 aa		3.28	□□□□□ -1.88
YKU70	YMR284W	AIM21	P40563	679 aa		3.28	□□□□□ -1.88
YKU70	YMR284W	SGD1	Q06132	899 aa		3.28	□□□□□ -1.88
YKU70	YMR284W	AIM26	P32858	118 aa		3.27	□□□□□ -1.89
YKU70	YMR284W	KTR2	P33550	425 aa		3.27	□□□□□ -1.89
YKU70	YMR284W	ARL1	P38116	183 aa	Known RBP	3.27	□□□□□ -1.89
YKU70	YMR284W	GCN5	Q03330	439 aa		3.27	□□□□□ -1.89
YKU70	YMR284W	LAM1	P38851	1228 aa		3.26	□□□□□ -1.89
YKU70	YMR284W	CMR1	Q12510	522 aa	Known RBP	3.26	□□□□□ -1.89
YKU70	YMR284W	CPS1	P27614	576 aa		3.26	□□□□□ -1.89
YKU70	YMR284W	RIM11	P38615	370 aa		3.26	□□□□□ -1.89
YKU70	YMR284W	MEF2	P39677	819 aa		3.26	□□□□□ -1.89
YKU70	YMR284W	SAM35	P14693	329 aa		3.25	□□□□□ -1.89
YKU70	YMR284W	PUP1	P25043	261 aa		3.25	□□□□□ -1.89
YKU70	YMR284W	PMI40	P29952	429 aa	Known RBP	3.25	□□□□□ -1.89
YKU70	YMR284W	PRP5	P21372	849 aa	Predicted RBP	3.24	□□□□□ -1.89
YKU70	YMR284W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	3.24	□□□□□ -1.89	not detected
YKU70	YMR284W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	3.24	□□□□□ -1.89	RIP-Chip
YKU70	YMR284W	RPB10	P22139	70 aa		3.23	□□□□□ -1.89
YKU70	YMR284W	CTR9	P89105	1077 aa		3.23	□□□□□ -1.89
YKU70	YMR284W	NTO1	Q12311	748 aa		3.23	□□□□□ -1.89
YKU70	YMR284W	SRO9	P25567	434 aa	Known RBP	3.23	□□□□□ -1.89
YKU70	YMR284W	MNN10	P50108	393 aa	Known RBP	3.23	□□□□□ -1.89
YKU70	YMR284W	STE11	P23561	717 aa		3.22	□□□□□ -1.89
YKU70	YMR284W	SPS1	P08458	490 aa		3.21	□□□□□ -1.89
YKU70	YMR284W	DOM34	P33309	386 aa		3.21	□□□□□ -1.89
YKU70	YMR284W	CHS7	P38843	316 aa		3.21	□□□□□ -1.89
YKU70	YMR284W	HNT2	P49775	206 aa		3.21	□□□□□ -1.89
YKU70	YMR284W	YLR257W	Q06146	321 aa	Known RBP	3.21	□□□□□ -1.89
YKU70	YMR284W	BDF2	Q07442	638 aa		3.21	□□□□□ -1.89
YKU70	YMR284W	HRK1	Q08732	759 aa	Known RBP	3.21	□□□□□ -1.89
YKU70	YMR284W	MCM6	P53091	1017 aa	Known RBP	3.21	□□□□□ -1.9
YKU70	YMR284W	NBA1	Q08229	501 aa	Known RBP	3.21	□□□□□ -1.9
YKU70	YMR284W	CWC15	Q03772	175 aa	Known RBP	3.2	□□□□□ -1.9
YKU70	YMR284W	YML083C	Q04526	418 aa		3.2	□□□□□ -1.9
YKU70	YMR284W	RET1	P22276	1149 aa	Known RBP	3.19	□□□□□ -1.9
YKU70	YMR284W	COB	P00163	385 aa		3.19	□□□□□ -1.9
YKU70	YMR284W	HSE1	P38753	452 aa		3.19	□□□□□ -1.9
YKU70	YMR284W	PNP1	Q05788	311 aa		3.19	□□□□□ -1.9
YKU70	YMR284W	LSO1	Q3E827	93 aa		3.19	□□□□□ -1.9
YKU70	YMR284W	YKL077W	P36081	392 aa		3.18	□□□□□ -1.9
YKU70	YMR284W	NMD3	P38861	518 aa	Known RBP	3.18	□□□□□ -1.9
YKU70	YMR284W	YAR028W	P39548	234 aa		3.18	□□□□□ -1.9
YKU70	YMR284W	TMA10	Q06177	86 aa		3.18	□□□□□ -1.9
YKU70	YMR284W	RSC58	Q07979	502 aa		3.18	□□□□□ -1.9
YKU70	YMR284W	ROT1	Q03691	256 aa		3.17	□□□□□ -1.9
YKU70	YMR284W	PPM2	Q08282	695 aa		3.17	□□□□□ -1.9
YKU70	YMR284W	CYC1	P00044	109 aa	Predicted RBP	3.16	□□□□□ -1.9
YKU70	YMR284W	TY1A-LR4	P0C2I8	440 aa	Known RBP	3.16	□□□□□ -1.9
YKU70	YMR284W	TY1A-DR6	P0CX70	440 aa		3.16	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms