RNA–Protein interactions for RNA: YML107C

PML39, Transcript of Protein required for nuclear retention of unspliced pre-mRNAs, yeastyeast

Gene PML39, Length 1,005 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PML39YML107C SPO71Q03868 1245 aa6.2□□□□□ -1.42
PML39YML107C SPR28Q04921 423 aa6.2□□□□□ -1.42
PML39YML107C PAN5P38787 379 aa6.19□□□□□ -1.42
PML39YML107C FYV10P40492 516 aa6.19□□□□□ -1.42
PML39YML107C MRPS18P42847 217 aa6.19□□□□□ -1.42
PML39YML107C SAP155P43612 1002 aa6.19□□□□□ -1.42
PML39YML107C NOP7P53261 605 aaKnown RBP6.19□□□□□ -1.42
PML39YML107C ULP1Q02724 621 aa6.19□□□□□ -1.42
PML39YML107C HAS1Q03532 505 aaKnown RBP6.19□□□□□ -1.42
PML39YML107C HXK1P04806 485 aaKnown RBP6.18□□□□□ -1.42
PML39YML107C HVG1P0CE11 249 aa6.18□□□□□ -1.42
PML39YML107C UGA4P32837 571 aa6.18□□□□□ -1.42
PML39YML107C ARI1P53111 347 aaKnown RBP6.18□□□□□ -1.42
PML39YML107C TOS4Q06266 489 aa6.18□□□□□ -1.42
PML39YML107C TY4B-PA0A0B7P3V8 1104 aa6.17□□□□□ -1.42
PML39YML107C RAD2P07276 1031 aa6.17□□□□□ -1.42
PML39YML107C PRP5P21372 849 aaPredicted RBP6.17□□□□□ -1.42
PML39YML107C PRE9P23638 258 aaKnown RBP6.17□□□□□ -1.42
PML39YML107C SFA1P32771 386 aa6.17□□□□□ -1.42
PML39YML107C YKL077WP36081 392 aa6.17□□□□□ -1.42
PML39YML107C INP52P50942 1183 aa6.17□□□□□ -1.42
PML39YML107C DSE4P53753 1117 aa6.17□□□□□ -1.42
PML39YML107C PEX13P80667 386 aa6.17□□□□□ -1.42
PML39YML107C MCD1Q12158 566 aa6.17□□□□□ -1.42
PML39YML107C TY4A-HQ6Q5P6 413 aa6.17□□□□□ -1.42
PML39YML107C HTS1P07263 546 aaKnown RBP6.16□□□□□ -1.42
PML39YML107C CYC8P14922 966 aa6.16□□□□□ -1.42
PML39YML107C COQ2P32378 372 aa6.16□□□□□ -1.42
PML39YML107C ADI1Q03677 179 aa6.16□□□□□ -1.42
PML39YML107C YMR074CQ04773 145 aa6.16□□□□□ -1.42
PML39YML107C ESF1Q06344 628 aaKnown RBP6.16□□□□□ -1.42
PML39YML107C FAR11P53917 953 aa6.15□□□□□ -1.42
PML39YML107C YPL109CQ02981 657 aa6.15□□□□□ -1.42
PML39YML107C NAP1P25293 417 aaKnown RBP6.14□□□□□ -1.43
PML39YML107C PGM1P33401 570 aaKnown RBP6.14□□□□□ -1.43
PML39YML107C MAE1P36013 669 aaKnown RBP6.14□□□□□ -1.43
PML39YML107C POL5P39985 1022 aaKnown RBP6.14□□□□□ -1.43
PML39YML107C UTP22P53254 1237 aaPredicted RBP6.14□□□□□ -1.43
PML39YML107C RMD1Q03441 430 aa6.14□□□□□ -1.43
PML39YML107C YIG1Q08956 461 aa6.14□□□□□ -1.43
PML39YML107C ELG1Q12050 791 aa6.14□□□□□ -1.43
PML39YML107C YLL054CQ12244 843 aa6.14□□□□□ -1.43
PML39YML107C MSH3P25336 1018 aa6.13□□□□□ -1.43
PML39YML107C RSC6P25632 483 aa6.13□□□□□ -1.43
PML39YML107C KAE1P36132 386 aa6.13□□□□□ -1.43
PML39YML107C ATG14P38270 344 aa6.13□□□□□ -1.43
PML39YML107C SVF1Q05515 481 aa6.13□□□□□ -1.43
PML39YML107C PEX28P38848 579 aa6.12□□□□□ -1.43
PML39YML107C NOG1Q02892 647 aaKnown RBP6.12□□□□□ -1.43
PML39YML107C PET112P33893 541 aa6.11□□□□□ -1.43
PML39YML107C GCV1P48015 400 aa6.11□□□□□ -1.43
PML39YML107C JIP5Q06214 492 aaPredicted RBP6.11□□□□□ -1.43
PML39YML107C MED7Q08278 222 aa6.11□□□□□ -1.43
PML39YML107C ERS1P17261 260 aa6.1□□□□□ -1.43
PML39YML107C EXO5P38289 585 aa6.1□□□□□ -1.43
PML39YML107C MET10P39692 1035 aa6.1□□□□□ -1.43
PML39YML107C IRC24P40580 263 aa6.1□□□□□ -1.43
PML39YML107C MTR4P47047 1073 aaKnown RBP6.1□□□□□ -1.43
PML39YML107C VMA4P22203 233 aaKnown RBP6.09□□□□□ -1.43
PML39YML107C PAM1P37304 830 aaKnown RBP6.09□□□□□ -1.43
PML39YML107C REI1P38344 393 aaPredicted RBP6.09□□□□□ -1.43
PML39YML107C MAD1P40957 749 aa6.09□□□□□ -1.43
PML39YML107C MEC3Q02574 474 aa6.09□□□□□ -1.43
PML39YML107C TRP3P00937 484 aa6.08□□□□□ -1.44
PML39YML107C TY1A-LR4P0C2I8 440 aaKnown RBP6.08□□□□□ -1.44
PML39YML107C TY1A-DR6P0CX70 440 aa6.08□□□□□ -1.44
PML39YML107C TY1A-ER1P0CX71 440 aa6.08□□□□□ -1.44
PML39YML107C TY1A-LR2P0CX72 440 aa6.08□□□□□ -1.44
PML39YML107C TY1A-PLP0CX73 440 aa6.08□□□□□ -1.44
PML39YML107C TY1A-JR1P0CX74 440 aa6.08□□□□□ -1.44
PML39YML107C TY1A-LR3P0CX75 440 aa6.08□□□□□ -1.44
PML39YML107C TY1A-ML2P0CX76 440 aa6.08□□□□□ -1.44
PML39YML107C PIC2P40035 300 aa6.08□□□□□ -1.44
PML39YML107C XKS1P42826 600 aa6.08□□□□□ -1.44
PML39YML107C KIP3P53086 805 aaKnown RBP6.08□□□□□ -1.44
PML39YML107C TY1A-GR1Q12085 440 aa6.08□□□□□ -1.44
PML39YML107C YLR122CQ12312 125 aa6.08□□□□□ -1.44
PML39YML107C TY1A-PR3Q6Q5H1 440 aaKnown RBP6.08□□□□□ -1.44
PML39YML107C TY1A-OLQ92392 440 aaKnown RBP6.08□□□□□ -1.44
PML39YML107C CLN2P20438 545 aa6.07□□□□□ -1.44
PML39YML107C LIP5P32875 414 aa6.07□□□□□ -1.44
PML39YML107C ARL1P38116 183 aaKnown RBP6.07□□□□□ -1.44
PML39YML107C YGL140CP53120 1219 aa6.07□□□□□ -1.44
PML39YML107C MRL1Q06815 381 aa6.07□□□□□ -1.44
PML39YML107C AVO1Q08236 1176 aa6.07□□□□□ -1.44
PML39YML107C YOR223WQ12015 292 aa6.07□□□□□ -1.44
PML39YML107C TY1A-NL1Q12391 440 aaKnown RBP6.07□□□□□ -1.44
PML39YML107C CHS2P14180 963 aa6.06□□□□□ -1.44
PML39YML107C YKR073CP36153 106 aa6.06□□□□□ -1.44
PML39YML107C SAF1P38352 637 aa6.06□□□□□ -1.44
PML39YML107C AVT1P47082 602 aa6.06□□□□□ -1.44
PML39YML107C ALG6Q12001 544 aaKnown RBP6.06□□□□□ -1.44
PML39YML107C SCP160P06105 1222 aaKnown RBP RIP-Chip data6.05□□□□□ -1.44not detected
PML39YML107C TAF13P11747 167 aa6.05□□□□□ -1.44
PML39YML107C SEC23P15303 768 aaKnown RBP6.05□□□□□ -1.44
PML39YML107C MNR2P35724 969 aa6.05□□□□□ -1.44
PML39YML107C SLS1P42900 643 aa6.05□□□□□ -1.44
PML39YML107C YGR130CP53278 816 aa6.05□□□□□ -1.44
PML39YML107C DOT1Q04089 582 aaKnown RBP6.05□□□□□ -1.44
PML39YML107C DED1P06634 604 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 52.7 ms